RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 OVOS2A0A0J9YW53 1432 aa26.71■■□□□ 1.87
SRSF4-206ENST00000605204 OVOS2Q6IE36 1432 aa26.71■■□□□ 1.87
SRSF4-206ENST00000605204 HSPA5P11021 654 aaKnown RBP26.71■■□□□ 1.87
SRSF4-206ENST00000605204 ARHGEF25Q86VW2 580 aa26.71■■□□□ 1.87
SRSF4-206ENST00000605204 STRN4Q9NRL3 753 aa26.7■■□□□ 1.86
SRSF4-206ENST00000605204 COL5A2P05997 1499 aaPredicted RBP26.69■■□□□ 1.86
SRSF4-206ENST00000605204 DISP2A7MBM2 1401 aa26.69■■□□□ 1.86
SRSF4-206ENST00000605204 SPATA31A1Q5TZJ5 1347 aa26.69■■□□□ 1.86
SRSF4-206ENST00000605204 PSDA5PKW4 1024 aaPredicted RBP26.68■■□□□ 1.86
SRSF4-206ENST00000605204 BAG6P46379 1132 aa26.67■■□□□ 1.86
SRSF4-206ENST00000605204 RREB1Q92766 1687 aa26.65■■□□□ 1.86
SRSF4-206ENST00000605204 THRAP3Q9Y2W1 955 aaKnown RBP26.65■■□□□ 1.86
SRSF4-206ENST00000605204 EN1Q05925 392 aaPredicted RBP26.64■■□□□ 1.86
SRSF4-206ENST00000605204 COG3Q96JB2 828 aa26.64■■□□□ 1.86
SRSF4-206ENST00000605204 CRB1P82279 1406 aa26.63■■□□□ 1.85
SRSF4-206ENST00000605204 ZBTB7CA1YPR0 619 aa26.63■■□□□ 1.85
SRSF4-206ENST00000605204 SOX12O15370 315 aa26.63■■□□□ 1.85
SRSF4-206ENST00000605204 BARGINQ6ZT62 677 aa26.63■■□□□ 1.85
SRSF4-206ENST00000605204 NUP188Q5SRE5 1749 aa26.62■■□□□ 1.85
SRSF4-206ENST00000605204 MYOM1P52179 1685 aa26.62■■□□□ 1.85
SRSF4-206ENST00000605204 LARP1Q6PKG0 1096 aaKnown RBP26.61■■□□□ 1.85
SRSF4-206ENST00000605204 TCP11L2Q8N4U5 519 aa26.6■■□□□ 1.85
SRSF4-206ENST00000605204 COL18A1P39060 1754 aa26.6■■□□□ 1.85
SRSF4-206ENST00000605204 PARP4Q9UKK3 1724 aaKnown RBP26.59■■□□□ 1.85
SRSF4-206ENST00000605204 WDR17Q8IZU2 1322 aa26.59■■□□□ 1.85
SRSF4-206ENST00000605204 WNK3Q9BYP7 1800 aa26.57■■□□□ 1.84
SRSF4-206ENST00000605204 NSD3Q9BZ95 1437 aa26.57■■□□□ 1.84
SRSF4-206ENST00000605204 FYB1O15117 783 aa26.56■■□□□ 1.84
SRSF4-206ENST00000605204 USP35Q9P2H5 1018 aa26.56■■□□□ 1.84
SRSF4-206ENST00000605204 AXIN2Q9Y2T1 843 aa26.56■■□□□ 1.84
SRSF4-206ENST00000605204 LRRC37A3O60309 1634 aa26.56■■□□□ 1.84
SRSF4-206ENST00000605204 TOM1L2Q6ZVM7 507 aa26.55■■□□□ 1.84
SRSF4-206ENST00000605204 EZH2Q15910 746 aaKnown RBP26.54■■□□□ 1.84
SRSF4-206ENST00000605204 POLR3GLQ9BT43 218 aa26.54■■□□□ 1.84
SRSF4-206ENST00000605204 PEAK1Q9H792 1746 aa26.54■■□□□ 1.84
SRSF4-206ENST00000605204 CGNL1Q0VF96 1302 aa26.54■■□□□ 1.84
SRSF4-206ENST00000605204 R3HDM1Q15032 1099 aaKnown RBP26.53■■□□□ 1.84
SRSF4-206ENST00000605204 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
SRSF4-206ENST00000605204 CARD14Q9BXL6 1004 aa26.53■■□□□ 1.84
SRSF4-206ENST00000605204 TRIM37O94972 964 aa26.52■■□□□ 1.84
SRSF4-206ENST00000605204 CSB-PGBD3P0DP91 1061 aa26.52■■□□□ 1.84
SRSF4-206ENST00000605204 CARD10Q9BWT7 1032 aa26.51■■□□□ 1.83
SRSF4-206ENST00000605204 GGNBP2Q9H3C7 697 aa26.51■■□□□ 1.83
SRSF4-206ENST00000605204 ERBB3P21860 1342 aa26.51■■□□□ 1.83
SRSF4-206ENST00000605204 RTL1A6NKG5 1358 aa26.51■■□□□ 1.83
SRSF4-206ENST00000605204 CCDC7Q96M83 1385 aa26.51■■□□□ 1.83
SRSF4-206ENST00000605204 IP6K1Q92551 441 aa26.49■■□□□ 1.83
SRSF4-206ENST00000605204 KIF24Q5T7B8 1368 aa26.48■■□□□ 1.83
SRSF4-206ENST00000605204 KIF20BQ96Q89 1820 aa26.48■■□□□ 1.83
SRSF4-206ENST00000605204 CAMKK2Q96RR4 588 aa26.48■■□□□ 1.83
SRSF4-206ENST00000605204 LTN1O94822 1766 aa26.48■■□□□ 1.83
SRSF4-206ENST00000605204 MAP3K19Q56UN5 1328 aa26.47■■□□□ 1.83
SRSF4-206ENST00000605204 C11orf95C9JLR9 678 aaPredicted RBP26.47■■□□□ 1.83
SRSF4-206ENST00000605204 FAM196AQ6ZSG2 479 aa26.47■■□□□ 1.83
SRSF4-206ENST00000605204 PDE3BQ13370 1112 aa26.46■■□□□ 1.83
SRSF4-206ENST00000605204 SBF2Q86WG5 1849 aa26.46■■□□□ 1.83
SRSF4-206ENST00000605204 PARD3Q8TEW0 1356 aa26.45■■□□□ 1.82
SRSF4-206ENST00000605204 AMPHP49418 695 aa26.45■■□□□ 1.82
SRSF4-206ENST00000605204 NSD2O96028 1365 aa26.44■■□□□ 1.82
SRSF4-206ENST00000605204 ANKRD24Q8TF21 1146 aa26.44■■□□□ 1.82
SRSF4-206ENST00000605204 RGPD3A6NKT7 1758 aaPredicted RBP26.43■■□□□ 1.82
SRSF4-206ENST00000605204 RGPD4Q7Z3J3 1758 aa26.43■■□□□ 1.82
SRSF4-206ENST00000605204 RGPD5Q99666 1765 aa26.43■■□□□ 1.82
SRSF4-206ENST00000605204 KIF7Q2M1P5 1343 aa26.43■■□□□ 1.82
SRSF4-206ENST00000605204 PANK3Q9H999 370 aa26.43■■□□□ 1.82
SRSF4-206ENST00000605204 HOXC9P31274 260 aa26.42■■□□□ 1.82
SRSF4-206ENST00000605204 APBA3O96018 575 aa26.41■■□□□ 1.82
SRSF4-206ENST00000605204 DDB1Q16531 1140 aa26.4■■□□□ 1.82
SRSF4-206ENST00000605204 NLRP2Q9NX02 1062 aa26.4■■□□□ 1.82
SRSF4-206ENST00000605204 FAM208AQ9UK61 1670 aaKnown RBP26.4■■□□□ 1.82
SRSF4-206ENST00000605204 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
SRSF4-206ENST00000605204 FLT4P35916 1363 aa26.39■■□□□ 1.81
SRSF4-206ENST00000605204 OVOS2A0A0G2JMS6 1433 aa26.38■■□□□ 1.81
SRSF4-206ENST00000605204 RRS1Q15050 365 aaKnown RBP26.37■■□□□ 1.81
SRSF4-206ENST00000605204 INSRP06213 1382 aa26.36■■□□□ 1.81
SRSF4-206ENST00000605204 KNSTRNQ9Y448 316 aa26.35■■□□□ 1.81
SRSF4-206ENST00000605204 TNS2Q63HR2 1409 aa26.34■■□□□ 1.81
SRSF4-206ENST00000605204 IL2RBP14784 551 aa26.33■■□□□ 1.81
SRSF4-206ENST00000605204 BCL9O00512 1426 aa26.33■■□□□ 1.8
SRSF4-206ENST00000605204 FBLN1P23142 703 aa26.33■■□□□ 1.8
SRSF4-206ENST00000605204 CASZ1Q86V15 1759 aa26.32■■□□□ 1.8
SRSF4-206ENST00000605204 EXOC5O00471 708 aa26.32■■□□□ 1.8
SRSF4-206ENST00000605204 ANKRD26Q9UPS8 1709 aa26.31■■□□□ 1.8
SRSF4-206ENST00000605204 LTV1Q96GA3 475 aaPredicted RBP26.31■■□□□ 1.8
SRSF4-206ENST00000605204 WASHC2AQ641Q2 1341 aa26.28■■□□□ 1.8
SRSF4-206ENST00000605204 PTF1AQ7RTS3 328 aa26.27■■□□□ 1.8
SRSF4-206ENST00000605204 HSP90AB2PQ58FF8 381 aa26.26■■□□□ 1.79
SRSF4-206ENST00000605204 EMILIN1Q9Y6C2 1016 aa26.26■■□□□ 1.79
SRSF4-206ENST00000605204 MORC1Q86VD1 984 aa26.24■■□□□ 1.79
SRSF4-206ENST00000605204 ANO8Q9HCE9 1232 aaPredicted RBP26.24■■□□□ 1.79
SRSF4-206ENST00000605204 POLKQ9UBT6 870 aa26.24■■□□□ 1.79
SRSF4-206ENST00000605204 AMER1Q5JTC6 1135 aaPredicted RBP26.23■■□□□ 1.79
SRSF4-206ENST00000605204 MARCH10Q8NA82 808 aaPredicted RBP26.23■■□□□ 1.79
SRSF4-206ENST00000605204 PPM1GO15355 546 aaPredicted RBP26.22■■□□□ 1.79
SRSF4-206ENST00000605204 NPC1L1Q9UHC9 1359 aa26.22■■□□□ 1.79
SRSF4-206ENST00000605204 NHSQ6T4R5 1651 aa26.21■■□□□ 1.79
SRSF4-206ENST00000605204 PER1O15534 1290 aaPredicted RBP26.2■■□□□ 1.79
SRSF4-206ENST00000605204 NBPF6Q5VWK0 638 aa26.2■■□□□ 1.79
SRSF4-206ENST00000605204 NBPF4Q96M43 638 aa26.2■■□□□ 1.79
SRSF4-206ENST00000605204 TNNT2P45379 298 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms