RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
RPS28-204ENST00000602140 OVOS2A0A0G2JMS6 1433 aa18.71■□□□□ 0.59
RPS28-204ENST00000602140 OVOS2A0A0J9YW53 1432 aa18.71■□□□□ 0.59
RPS28-204ENST00000602140 OVOS2Q6IE36 1432 aa18.71■□□□□ 0.59
RPS28-204ENST00000602140 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
RPS28-204ENST00000602140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
RPS28-204ENST00000602140 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
RPS28-204ENST00000602140 RREB1Q92766 1687 aa18.69■□□□□ 0.58
RPS28-204ENST00000602140 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
RPS28-204ENST00000602140 NFAT5O94916 1531 aa18.69■□□□□ 0.58
RPS28-204ENST00000602140 NBPF14Q5TI25 921 aa18.68■□□□□ 0.58
RPS28-204ENST00000602140 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
RPS28-204ENST00000602140 MON2Q7Z3U7 1717 aa18.68■□□□□ 0.58
RPS28-204ENST00000602140 PEAK1Q9H792 1746 aa18.68■□□□□ 0.58
RPS28-204ENST00000602140 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
RPS28-204ENST00000602140 CDCA7Q9BWT1 371 aaPredicted RBP18.67■□□□□ 0.58
RPS28-204ENST00000602140 CARD10Q9BWT7 1032 aa18.67■□□□□ 0.58
RPS28-204ENST00000602140 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
RPS28-204ENST00000602140 CD163L1Q9NR16 1453 aa18.66■□□□□ 0.58
RPS28-204ENST00000602140 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
RPS28-204ENST00000602140 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
RPS28-204ENST00000602140 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
RPS28-204ENST00000602140 NME9Q86XW9 330 aa18.65■□□□□ 0.58
RPS28-204ENST00000602140 MARCH10Q8NA82 808 aaPredicted RBP18.65■□□□□ 0.58
RPS28-204ENST00000602140 USP31Q70CQ4 1352 aa18.65■□□□□ 0.58
RPS28-204ENST00000602140 PTF1AQ7RTS3 328 aa18.64■□□□□ 0.57
RPS28-204ENST00000602140 BCL11BQ9C0K0 894 aaPredicted RBP18.63■□□□□ 0.57
RPS28-204ENST00000602140 ABCC6O95255 1503 aa18.63■□□□□ 0.57
RPS28-204ENST00000602140 SBF2Q86WG5 1849 aa18.63■□□□□ 0.57
RPS28-204ENST00000602140 EXOC5O00471 708 aa18.62■□□□□ 0.57
RPS28-204ENST00000602140 PLSCR1O15162 318 aa18.62■□□□□ 0.57
RPS28-204ENST00000602140 CCDC7Q96M83 1385 aa18.62■□□□□ 0.57
RPS28-204ENST00000602140 USP54Q70EL1 1684 aa18.61■□□□□ 0.57
RPS28-204ENST00000602140 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
RPS28-204ENST00000602140 TERF2IPQ9NYB0 399 aa18.61■□□□□ 0.57
RPS28-204ENST00000602140 BCL9O00512 1426 aa18.6■□□□□ 0.57
RPS28-204ENST00000602140 A0A1W2PP64 1363 aa18.6■□□□□ 0.57
RPS28-204ENST00000602140 PUS7Q96PZ0 661 aaKnown RBP18.6■□□□□ 0.57
RPS28-204ENST00000602140 ERBB3P21860 1342 aa18.59■□□□□ 0.57
RPS28-204ENST00000602140 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
RPS28-204ENST00000602140 RGPD3A6NKT7 1758 aaPredicted RBP18.58■□□□□ 0.57
RPS28-204ENST00000602140 RGPD4Q7Z3J3 1758 aa18.58■□□□□ 0.57
RPS28-204ENST00000602140 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
RPS28-204ENST00000602140 TESK2Q96S53 571 aa18.57■□□□□ 0.56
RPS28-204ENST00000602140 LTN1O94822 1766 aa18.57■□□□□ 0.56
RPS28-204ENST00000602140 TNS2Q63HR2 1409 aa18.57■□□□□ 0.56
RPS28-204ENST00000602140 PROM2Q8N271 834 aa18.56■□□□□ 0.56
RPS28-204ENST00000602140 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
RPS28-204ENST00000602140 ANO8Q9HCE9 1232 aaPredicted RBP18.56■□□□□ 0.56
RPS28-204ENST00000602140 SPON1Q9HCB6 807 aa18.55■□□□□ 0.56
RPS28-204ENST00000602140 KCNQ2O43526 872 aa18.54■□□□□ 0.56
RPS28-204ENST00000602140 IL2RBP14784 551 aa18.54■□□□□ 0.56
RPS28-204ENST00000602140 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
RPS28-204ENST00000602140 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
RPS28-204ENST00000602140 TXNRD1Q16881 649 aa18.52■□□□□ 0.56
RPS28-204ENST00000602140 ACSBG1Q96GR2 724 aa18.52■□□□□ 0.56
RPS28-204ENST00000602140 PPP1R1BQ9UD71 204 aaPredicted RBP18.52■□□□□ 0.56
RPS28-204ENST00000602140 SLC24A1O60721 1099 aa18.51■□□□□ 0.55
RPS28-204ENST00000602140 IP6K1Q92551 441 aa18.51■□□□□ 0.55
RPS28-204ENST00000602140 COG3Q96JB2 828 aa18.5■□□□□ 0.55
RPS28-204ENST00000602140 PDGFDQ9GZP0 370 aaPredicted RBP18.5■□□□□ 0.55
RPS28-204ENST00000602140 LTV1Q96GA3 475 aaPredicted RBP18.49■□□□□ 0.55
RPS28-204ENST00000602140 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
RPS28-204ENST00000602140 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
RPS28-204ENST00000602140 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
RPS28-204ENST00000602140 FBLN1P23142 703 aa18.47■□□□□ 0.55
RPS28-204ENST00000602140 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
RPS28-204ENST00000602140 MAP3K19Q56UN5 1328 aa18.47■□□□□ 0.55
RPS28-204ENST00000602140 ZBTB7AO95365 584 aa18.46■□□□□ 0.55
RPS28-204ENST00000602140 SLC15A2Q16348 729 aa18.46■□□□□ 0.55
RPS28-204ENST00000602140 USP47Q96K76 1375 aa18.45■□□□□ 0.54
RPS28-204ENST00000602140 HOXC9P31274 260 aa18.45■□□□□ 0.54
RPS28-204ENST00000602140 AMPHP49418 695 aa18.45■□□□□ 0.54
RPS28-204ENST00000602140 TMF1P82094 1093 aa18.45■□□□□ 0.54
RPS28-204ENST00000602140 DDX54Q8TDD1 881 aaKnown RBP18.44■□□□□ 0.54
RPS28-204ENST00000602140 FAM208AQ9UK61 1670 aaKnown RBP18.44■□□□□ 0.54
RPS28-204ENST00000602140 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
RPS28-204ENST00000602140 GGNBP2Q9H3C7 697 aa18.42■□□□□ 0.54
RPS28-204ENST00000602140 FYB1O15117 783 aa18.41■□□□□ 0.54
RPS28-204ENST00000602140 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
RPS28-204ENST00000602140 BTAF1O14981 1849 aa18.41■□□□□ 0.54
RPS28-204ENST00000602140 PTGER2P43116 358 aa18.4■□□□□ 0.54
RPS28-204ENST00000602140 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
RPS28-204ENST00000602140 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
RPS28-204ENST00000602140 LRRC4BQ9NT99 713 aa18.38■□□□□ 0.53
RPS28-204ENST00000602140 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
RPS28-204ENST00000602140 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
RPS28-204ENST00000602140 YY1P25490 414 aa18.37■□□□□ 0.53
RPS28-204ENST00000602140 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
RPS28-204ENST00000602140 SYTL4Q96C24 671 aaPredicted RBP18.37■□□□□ 0.53
RPS28-204ENST00000602140 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
RPS28-204ENST00000602140 MYOM1P52179 1685 aa18.37■□□□□ 0.53
RPS28-204ENST00000602140 RGPD2P0DJD1 1756 aa18.37■□□□□ 0.53
RPS28-204ENST00000602140 KAT6BQ8WYB5 2073 aa18.37■□□□□ 0.53
RPS28-204ENST00000602140 MEGF6O75095 1541 aa18.36■□□□□ 0.53
RPS28-204ENST00000602140 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
RPS28-204ENST00000602140 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
RPS28-204ENST00000602140 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
RPS28-204ENST00000602140 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
RPS28-204ENST00000602140 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms