RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ONECUT3O60422 494 aaPredicted RBP16.91■□□□□ 0.3
ZNF548-210ENST00000600442 SF3B2Q13435 895 aaKnown RBP16.91■□□□□ 0.3
ZNF548-210ENST00000600442 AKAP12Q02952 1782 aa16.9■□□□□ 0.3
ZNF548-210ENST00000600442 NEFMP07197 916 aa16.9■□□□□ 0.3
ZNF548-210ENST00000600442 ABTB2Q8N961 1025 aa16.9■□□□□ 0.3
ZNF548-210ENST00000600442 ADAMTS8Q9UP79 889 aa16.9■□□□□ 0.3
ZNF548-210ENST00000600442 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
ZNF548-210ENST00000600442 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
ZNF548-210ENST00000600442 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.29
ZNF548-210ENST00000600442 PPM1GO15355 546 aaPredicted RBP16.89■□□□□ 0.29
ZNF548-210ENST00000600442 NLRP6P59044 892 aa16.89■□□□□ 0.29
ZNF548-210ENST00000600442 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
ZNF548-210ENST00000600442 ABCA3Q99758 1704 aa16.89■□□□□ 0.29
ZNF548-210ENST00000600442 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
ZNF548-210ENST00000600442 SSH2Q76I76 1423 aa16.88■□□□□ 0.29
ZNF548-210ENST00000600442 DIAPH1O60610 1272 aaKnown RBP16.88■□□□□ 0.29
ZNF548-210ENST00000600442 KRT27Q7Z3Y8 459 aa16.88■□□□□ 0.29
ZNF548-210ENST00000600442 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
ZNF548-210ENST00000600442 FAM83GA6ND36 823 aa16.87■□□□□ 0.29
ZNF548-210ENST00000600442 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
ZNF548-210ENST00000600442 KCNH5Q8NCM2 988 aa16.86■□□□□ 0.29
ZNF548-210ENST00000600442 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
ZNF548-210ENST00000600442 U2AF1L5P0DN76 240 aaPredicted RBP16.85■□□□□ 0.29
ZNF548-210ENST00000600442 U2AF1Q01081 240 aaKnown RBP eCLIP16.85■□□□□ 0.29
ZNF548-210ENST00000600442 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
ZNF548-210ENST00000600442 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
ZNF548-210ENST00000600442 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
ZNF548-210ENST00000600442 OVOS2A0A0J9YW53 1432 aa16.84■□□□□ 0.29
ZNF548-210ENST00000600442 OVOS2Q6IE36 1432 aa16.84■□□□□ 0.29
ZNF548-210ENST00000600442 A0A0G2JS52 829 aa16.83■□□□□ 0.28
ZNF548-210ENST00000600442 LRP5O75197 1615 aa16.83■□□□□ 0.28
ZNF548-210ENST00000600442 MYT1Q01538 1121 aa16.83■□□□□ 0.28
ZNF548-210ENST00000600442 NRKQ7Z2Y5 1582 aa16.82■□□□□ 0.28
ZNF548-210ENST00000600442 KIF24Q5T7B8 1368 aa16.82■□□□□ 0.28
ZNF548-210ENST00000600442 AMPHP49418 695 aa16.82■□□□□ 0.28
ZNF548-210ENST00000600442 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
ZNF548-210ENST00000600442 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
ZNF548-210ENST00000600442 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
ZNF548-210ENST00000600442 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
ZNF548-210ENST00000600442 BTG4Q9NY30 223 aa16.81■□□□□ 0.28
ZNF548-210ENST00000600442 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
ZNF548-210ENST00000600442 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
ZNF548-210ENST00000600442 TRPM3Q9HCF6 1732 aaPredicted RBP16.8■□□□□ 0.28
ZNF548-210ENST00000600442 BAG6P46379 1132 aa16.8■□□□□ 0.28
ZNF548-210ENST00000600442 FCHSD2O94868 740 aa16.79■□□□□ 0.28
ZNF548-210ENST00000600442 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
ZNF548-210ENST00000600442 EMILIN1Q9Y6C2 1016 aa16.79■□□□□ 0.28
ZNF548-210ENST00000600442 ALS2Q96Q42 1657 aa16.78■□□□□ 0.28
ZNF548-210ENST00000600442 SOX12O15370 315 aa16.78■□□□□ 0.28
ZNF548-210ENST00000600442 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
ZNF548-210ENST00000600442 COL14A1Q05707 1796 aaKnown RBP16.78■□□□□ 0.28
ZNF548-210ENST00000600442 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
ZNF548-210ENST00000600442 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
ZNF548-210ENST00000600442 FAM182BQ5T319 152 aa16.77■□□□□ 0.28
ZNF548-210ENST00000600442 FLT4P35916 1363 aa16.77■□□□□ 0.27
ZNF548-210ENST00000600442 NUTM2GQ5VZR2 741 aa16.76■□□□□ 0.27
ZNF548-210ENST00000600442 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
ZNF548-210ENST00000600442 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
ZNF548-210ENST00000600442 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
ZNF548-210ENST00000600442 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
ZNF548-210ENST00000600442 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
ZNF548-210ENST00000600442 APAF1O14727 1248 aa16.74■□□□□ 0.27
ZNF548-210ENST00000600442 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
ZNF548-210ENST00000600442 CRYBG1Q9Y4K1 1723 aa16.73■□□□□ 0.27
ZNF548-210ENST00000600442 NEFLP07196 543 aa16.73■□□□□ 0.27
ZNF548-210ENST00000600442 IL13P35225 146 aa16.73■□□□□ 0.27
ZNF548-210ENST00000600442 GCP02774 474 aa16.72■□□□□ 0.27
ZNF548-210ENST00000600442 FBLN1P23142 703 aa16.72■□□□□ 0.27
ZNF548-210ENST00000600442 COL3A1P02461 1466 aaPredicted RBP16.72■□□□□ 0.27
ZNF548-210ENST00000600442 PIK3C2AO00443 1686 aa16.72■□□□□ 0.27
ZNF548-210ENST00000600442 TNS1Q9HBL0 1735 aaKnown RBP16.71■□□□□ 0.27
ZNF548-210ENST00000600442 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
ZNF548-210ENST00000600442 R3HDM1Q15032 1099 aaKnown RBP16.71■□□□□ 0.27
ZNF548-210ENST00000600442 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
ZNF548-210ENST00000600442 THSD7AQ9UPZ6 1657 aa16.71■□□□□ 0.27
ZNF548-210ENST00000600442 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
ZNF548-210ENST00000600442 EIF4A2Q14240 407 aaKnown RBP16.7■□□□□ 0.26
ZNF548-210ENST00000600442 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
ZNF548-210ENST00000600442 IP6K1Q92551 441 aa16.7■□□□□ 0.26
ZNF548-210ENST00000600442 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
ZNF548-210ENST00000600442 USP19O94966 1318 aa16.7■□□□□ 0.26
ZNF548-210ENST00000600442 HOXC9P31274 260 aa16.69■□□□□ 0.26
ZNF548-210ENST00000600442 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
ZNF548-210ENST00000600442 HSP90AB2PQ58FF8 381 aa16.69■□□□□ 0.26
ZNF548-210ENST00000600442 USP54Q70EL1 1684 aa16.69■□□□□ 0.26
ZNF548-210ENST00000600442 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
ZNF548-210ENST00000600442 WDR63Q8IWG1 891 aa16.68■□□□□ 0.26
ZNF548-210ENST00000600442 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
ZNF548-210ENST00000600442 E9PSI1 815 aa16.67■□□□□ 0.26
ZNF548-210ENST00000600442 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
ZNF548-210ENST00000600442 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
ZNF548-210ENST00000600442 MAP2P11137 1827 aaKnown RBP16.67■□□□□ 0.26
ZNF548-210ENST00000600442 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
ZNF548-210ENST00000600442 SPATA31A1Q5TZJ5 1347 aa16.67■□□□□ 0.26
ZNF548-210ENST00000600442 TRIM37O94972 964 aa16.66■□□□□ 0.26
ZNF548-210ENST00000600442 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
ZNF548-210ENST00000600442 CHRNA2Q15822 529 aa16.66■□□□□ 0.26
ZNF548-210ENST00000600442 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
ZNF548-210ENST00000600442 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
ZNF548-210ENST00000600442 HMOX1P09601 288 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms