RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 ADAMTS8Q9UP79 889 aa21.94■■□□□ 1.1
U2AF1L4-220ENST00000600296 CPDO75976 1380 aa21.94■■□□□ 1.1
U2AF1L4-220ENST00000600296 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
U2AF1L4-220ENST00000600296 LMOD2Q6P5Q4 547 aa21.93■■□□□ 1.1
U2AF1L4-220ENST00000600296 POTEAQ6S8J7 498 aa21.93■■□□□ 1.1
U2AF1L4-220ENST00000600296 ARHGEF25Q86VW2 580 aa21.93■■□□□ 1.1
U2AF1L4-220ENST00000600296 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
U2AF1L4-220ENST00000600296 NUTM2BA6NNL0 878 aaPredicted RBP21.92■■□□□ 1.1
U2AF1L4-220ENST00000600296 NUTM2EB1AL46 878 aaPredicted RBP21.92■■□□□ 1.1
U2AF1L4-220ENST00000600296 SOX12O15370 315 aa21.92■■□□□ 1.1
U2AF1L4-220ENST00000600296 IL13P35225 146 aa21.92■■□□□ 1.1
U2AF1L4-220ENST00000600296 NUTM2AQ8IVF1 878 aaPredicted RBP21.92■■□□□ 1.1
U2AF1L4-220ENST00000600296 LRRC59Q96AG4 307 aaKnown RBP21.92■■□□□ 1.1
U2AF1L4-220ENST00000600296 HOXC9P31274 260 aa21.91■■□□□ 1.1
U2AF1L4-220ENST00000600296 LRP6O75581 1613 aa21.91■■□□□ 1.1
U2AF1L4-220ENST00000600296 SPATA31A6Q5VVP1 1343 aa21.9■■□□□ 1.1
U2AF1L4-220ENST00000600296 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
U2AF1L4-220ENST00000600296 NUDCQ9Y266 331 aa21.9■■□□□ 1.1
U2AF1L4-220ENST00000600296 IP6K1Q92551 441 aa21.89■■□□□ 1.09
U2AF1L4-220ENST00000600296 AMPHP49418 695 aa21.88■■□□□ 1.09
U2AF1L4-220ENST00000600296 EIF4A2Q14240 407 aaKnown RBP21.88■■□□□ 1.09
U2AF1L4-220ENST00000600296 HSP90AB2PQ58FF8 381 aa21.88■■□□□ 1.09
U2AF1L4-220ENST00000600296 NCAPD2Q15021 1401 aa21.87■■□□□ 1.09
U2AF1L4-220ENST00000600296 ZBED9Q6R2W3 1325 aa21.86■■□□□ 1.09
U2AF1L4-220ENST00000600296 HNRNPUQ00839 825 aaKnown RBP eCLIP21.86■■□□□ 1.09
U2AF1L4-220ENST00000600296 COL14A1Q05707 1796 aaKnown RBP21.86■■□□□ 1.09
U2AF1L4-220ENST00000600296 DLG5Q8TDM6 1919 aa21.85■■□□□ 1.09
U2AF1L4-220ENST00000600296 MEX3CQ5U5Q3 659 aaKnown RBP21.85■■□□□ 1.09
U2AF1L4-220ENST00000600296 CABLES1Q8TDN4 633 aa21.84■■□□□ 1.09
U2AF1L4-220ENST00000600296 KDRP35968 1356 aa21.84■■□□□ 1.09
U2AF1L4-220ENST00000600296 IGSF1Q8N6C5 1336 aa21.83■■□□□ 1.09
U2AF1L4-220ENST00000600296 U2AF1L5P0DN76 240 aaPredicted RBP21.83■■□□□ 1.09
U2AF1L4-220ENST00000600296 U2AF1Q01081 240 aaKnown RBP eCLIP21.83■■□□□ 1.09
U2AF1L4-220ENST00000600296 KIAA0232Q92628 1395 aa21.83■■□□□ 1.08
U2AF1L4-220ENST00000600296 RSPH6AQ9H0K4 717 aa21.82■■□□□ 1.08
U2AF1L4-220ENST00000600296 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
U2AF1L4-220ENST00000600296 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
U2AF1L4-220ENST00000600296 RUNDC1Q96C34 613 aa21.81■■□□□ 1.08
U2AF1L4-220ENST00000600296 PLEKHF1Q96S99 279 aa21.81■■□□□ 1.08
U2AF1L4-220ENST00000600296 FCHSD2O94868 740 aa21.8■■□□□ 1.08
U2AF1L4-220ENST00000600296 ZC3H6P61129 1189 aaKnown RBP21.79■■□□□ 1.08
U2AF1L4-220ENST00000600296 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
U2AF1L4-220ENST00000600296 NRAPQ86VF7 1730 aa21.79■■□□□ 1.08
U2AF1L4-220ENST00000600296 NWD2Q9ULI1 1742 aa21.78■■□□□ 1.08
U2AF1L4-220ENST00000600296 CCDC146Q8IYE0 955 aa21.78■■□□□ 1.08
U2AF1L4-220ENST00000600296 ERBB3P21860 1342 aa21.78■■□□□ 1.08
U2AF1L4-220ENST00000600296 ADAMTS2O95450 1211 aa21.77■■□□□ 1.08
U2AF1L4-220ENST00000600296 NGEFQ8N5V2 710 aa21.77■■□□□ 1.08
U2AF1L4-220ENST00000600296 PNNQ9H307 717 aaKnown RBP21.77■■□□□ 1.08
U2AF1L4-220ENST00000600296 EYA1Q99502 592 aa21.76■■□□□ 1.07
U2AF1L4-220ENST00000600296 AXIN2Q9Y2T1 843 aa21.76■■□□□ 1.07
U2AF1L4-220ENST00000600296 COL5A2P05997 1499 aaPredicted RBP21.76■■□□□ 1.07
U2AF1L4-220ENST00000600296 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
U2AF1L4-220ENST00000600296 PLEKHG5O94827 1062 aa21.74■■□□□ 1.07
U2AF1L4-220ENST00000600296 AFF2P51816 1311 aa21.74■■□□□ 1.07
U2AF1L4-220ENST00000600296 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
U2AF1L4-220ENST00000600296 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
U2AF1L4-220ENST00000600296 APAF1O14727 1248 aa21.73■■□□□ 1.07
U2AF1L4-220ENST00000600296 PRKAR2BP31323 418 aa21.73■■□□□ 1.07
U2AF1L4-220ENST00000600296 ANKRD24Q8TF21 1146 aa21.73■■□□□ 1.07
U2AF1L4-220ENST00000600296 PLEKHG2Q9H7P9 1386 aa21.73■■□□□ 1.07
U2AF1L4-220ENST00000600296 VIRMAQ69YN4 1812 aaKnown RBP21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 ZBTB7CA1YPR0 619 aa21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 CENPBP07199 599 aaPredicted RBP21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 HMOX1P09601 288 aa21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 AEBP1Q8IUX7 1158 aa21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 PKD1L3Q7Z443 1732 aa21.72■■□□□ 1.07
U2AF1L4-220ENST00000600296 HAP1P54257 671 aaPredicted RBP21.71■■□□□ 1.07
U2AF1L4-220ENST00000600296 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
U2AF1L4-220ENST00000600296 TCP11L2Q8N4U5 519 aa21.71■■□□□ 1.07
U2AF1L4-220ENST00000600296 PARP4Q9UKK3 1724 aaKnown RBP21.71■■□□□ 1.07
U2AF1L4-220ENST00000600296 CHRNA2Q15822 529 aa21.7■■□□□ 1.06
U2AF1L4-220ENST00000600296 NGLY1Q96IV0 654 aa21.7■■□□□ 1.06
U2AF1L4-220ENST00000600296 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
U2AF1L4-220ENST00000600296 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
U2AF1L4-220ENST00000600296 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
U2AF1L4-220ENST00000600296 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.69■■□□□ 1.06
U2AF1L4-220ENST00000600296 NBPF6Q5VWK0 638 aa21.68■■□□□ 1.06
U2AF1L4-220ENST00000600296 NBPF4Q96M43 638 aa21.68■■□□□ 1.06
U2AF1L4-220ENST00000600296 LRRC37A3O60309 1634 aa21.68■■□□□ 1.06
U2AF1L4-220ENST00000600296 TMPOP42166 694 aaKnown RBP21.67■■□□□ 1.06
U2AF1L4-220ENST00000600296 WDR17Q8IZU2 1322 aa21.66■■□□□ 1.06
U2AF1L4-220ENST00000600296 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
U2AF1L4-220ENST00000600296 QTRT2Q9H974 415 aaKnown RBP21.66■■□□□ 1.06
U2AF1L4-220ENST00000600296 SLIT2O94813 1529 aa21.65■■□□□ 1.06
U2AF1L4-220ENST00000600296 FAM83GA6ND36 823 aa21.65■■□□□ 1.06
U2AF1L4-220ENST00000600296 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
U2AF1L4-220ENST00000600296 NFE2L2Q16236 605 aa21.65■■□□□ 1.06
U2AF1L4-220ENST00000600296 SHANK3Q9BYB0 1731 aa21.64■■□□□ 1.06
U2AF1L4-220ENST00000600296 ADAMTS7Q9UKP4 1686 aa21.64■■□□□ 1.05
U2AF1L4-220ENST00000600296 NEFMP07197 916 aa21.64■■□□□ 1.05
U2AF1L4-220ENST00000600296 RXRBP28702 533 aa21.64■■□□□ 1.05
U2AF1L4-220ENST00000600296 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
U2AF1L4-220ENST00000600296 FNBP4Q8N3X1 1017 aaPredicted RBP21.62■■□□□ 1.05
U2AF1L4-220ENST00000600296 USHBP1Q8N6Y0 703 aa21.62■■□□□ 1.05
U2AF1L4-220ENST00000600296 MEGF6O75095 1541 aa21.61■■□□□ 1.05
U2AF1L4-220ENST00000600296 WWC1Q8IX03 1113 aa21.61■■□□□ 1.05
U2AF1L4-220ENST00000600296 USP21Q9UK80 565 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms