RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 HSP90B2PQ58FF3 399 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
SYMPK-215ENST00000600237 ANKRD1Q15327 319 aa17.33■□□□□ 0.37
SYMPK-215ENST00000600237 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.37
SYMPK-215ENST00000600237 DHX8Q14562 1220 aaKnown RBP17.33■□□□□ 0.36
SYMPK-215ENST00000600237 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
SYMPK-215ENST00000600237 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.36
SYMPK-215ENST00000600237 FIBPO43427 364 aa17.33■□□□□ 0.36
SYMPK-215ENST00000600237 BRPF3Q9ULD4 1205 aa17.33■□□□□ 0.36
SYMPK-215ENST00000600237 CDR1P51861 262 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 CYP46A1Q9Y6A2 500 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 ABCC5O15440 1437 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
SYMPK-215ENST00000600237 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 CCP110O43303 1012 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 RAD21O60216 631 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 RUFY1Q96T51 708 aa17.32■□□□□ 0.36
SYMPK-215ENST00000600237 FCHSD2O94868 740 aa17.31■□□□□ 0.36
SYMPK-215ENST00000600237 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
SYMPK-215ENST00000600237 ZNF530Q6P9A1 599 aaPredicted RBP17.31■□□□□ 0.36
SYMPK-215ENST00000600237 RPAP2Q8IXW5 612 aaPredicted RBP17.31■□□□□ 0.36
SYMPK-215ENST00000600237 NUDT16Q96DE0 195 aaKnown RBP17.31■□□□□ 0.36
SYMPK-215ENST00000600237 AK7Q96M32 723 aa17.31■□□□□ 0.36
SYMPK-215ENST00000600237 JMYQ8N9B5 988 aa17.3■□□□□ 0.36
SYMPK-215ENST00000600237 CCDC192P0DO97 292 aa17.3■□□□□ 0.36
SYMPK-215ENST00000600237 CTDP1Q9Y5B0 961 aaPredicted RBP17.3■□□□□ 0.36
SYMPK-215ENST00000600237 DENND4BO75064 1496 aaPredicted RBP17.3■□□□□ 0.36
SYMPK-215ENST00000600237 PDIA4P13667 645 aaKnown RBP17.29■□□□□ 0.36
SYMPK-215ENST00000600237 MCM4P33991 863 aa17.29■□□□□ 0.36
SYMPK-215ENST00000600237 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
SYMPK-215ENST00000600237 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
SYMPK-215ENST00000600237 NUTM2BA6NNL0 878 aaPredicted RBP17.29■□□□□ 0.36
SYMPK-215ENST00000600237 NUTM2EB1AL46 878 aaPredicted RBP17.29■□□□□ 0.36
SYMPK-215ENST00000600237 KIF6Q6ZMV9 814 aa17.29■□□□□ 0.36
SYMPK-215ENST00000600237 NUTM2AQ8IVF1 878 aaPredicted RBP17.29■□□□□ 0.36
SYMPK-215ENST00000600237 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
SYMPK-215ENST00000600237 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
SYMPK-215ENST00000600237 CABP4P57796 275 aa17.28■□□□□ 0.36
SYMPK-215ENST00000600237 STK38Q15208 465 aa17.28■□□□□ 0.36
SYMPK-215ENST00000600237 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
SYMPK-215ENST00000600237 KRT85P78386 507 aa17.28■□□□□ 0.36
SYMPK-215ENST00000600237 PDILTQ8N807 584 aa17.28■□□□□ 0.36
SYMPK-215ENST00000600237 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
SYMPK-215ENST00000600237 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.35
SYMPK-215ENST00000600237 FILIP1LQ4L180 1135 aa17.27■□□□□ 0.35
SYMPK-215ENST00000600237 ERCC4Q92889 916 aaPredicted RBP17.27■□□□□ 0.35
SYMPK-215ENST00000600237 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
SYMPK-215ENST00000600237 OFD1O75665 1012 aa17.26■□□□□ 0.35
SYMPK-215ENST00000600237 DDX54Q8TDD1 881 aaKnown RBP17.26■□□□□ 0.35
SYMPK-215ENST00000600237 FANCAO15360 1455 aa17.26■□□□□ 0.35
SYMPK-215ENST00000600237 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
SYMPK-215ENST00000600237 SMC2O95347 1197 aa17.26■□□□□ 0.35
SYMPK-215ENST00000600237 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
SYMPK-215ENST00000600237 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
SYMPK-215ENST00000600237 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
SYMPK-215ENST00000600237 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
SYMPK-215ENST00000600237 SMARCE1Q969G3 411 aa17.25■□□□□ 0.35
SYMPK-215ENST00000600237 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
SYMPK-215ENST00000600237 NFE2L2Q16236 605 aa17.24■□□□□ 0.35
SYMPK-215ENST00000600237 TXLNAP40222 546 aa17.24■□□□□ 0.35
SYMPK-215ENST00000600237 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
SYMPK-215ENST00000600237 PRM3Q9NNZ6 103 aa17.24■□□□□ 0.35
SYMPK-215ENST00000600237 WAPLQ7Z5K2 1190 aa17.24■□□□□ 0.35
SYMPK-215ENST00000600237 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.357e-7■■■■□ 19.9
SYMPK-215ENST00000600237 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
SYMPK-215ENST00000600237 NOM1Q5C9Z4 860 aaKnown RBP17.23■□□□□ 0.35
SYMPK-215ENST00000600237 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-215ENST00000600237 IDI1Q13907 227 aa17.23■□□□□ 0.35
SYMPK-215ENST00000600237 FBXO31Q5XUX0 539 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-215ENST00000600237 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
SYMPK-215ENST00000600237 TNMDQ9H2S6 317 aa17.23■□□□□ 0.35
SYMPK-215ENST00000600237 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
SYMPK-215ENST00000600237 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
SYMPK-215ENST00000600237 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
SYMPK-215ENST00000600237 SLC3A2P08195 630 aaKnown RBP17.22■□□□□ 0.35
SYMPK-215ENST00000600237 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
SYMPK-215ENST00000600237 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
SYMPK-215ENST00000600237 FAM177BA6PVY3 158 aa17.22■□□□□ 0.35
SYMPK-215ENST00000600237 PIP4K2BP78356 416 aa17.22■□□□□ 0.35
SYMPK-215ENST00000600237 EPS15P42566 896 aa17.21■□□□□ 0.35
SYMPK-215ENST00000600237 KRT32Q14532 448 aa17.21■□□□□ 0.35
SYMPK-215ENST00000600237 FYB1O15117 783 aa17.21■□□□□ 0.35
SYMPK-215ENST00000600237 SRGAP3O43295 1099 aa17.21■□□□□ 0.35
SYMPK-215ENST00000600237 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
SYMPK-215ENST00000600237 TMEM57Q8N5G2 664 aa17.21■□□□□ 0.35
SYMPK-215ENST00000600237 ATP2B1P20020 1258 aa17.2■□□□□ 0.34
SYMPK-215ENST00000600237 TRIM22Q8IYM9 498 aa17.2■□□□□ 0.34
SYMPK-215ENST00000600237 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
SYMPK-215ENST00000600237 ESPNB1AK53 854 aa17.2■□□□□ 0.34
SYMPK-215ENST00000600237 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
SYMPK-215ENST00000600237 CAGE1Q8TC20 777 aa17.2■□□□□ 0.34
SYMPK-215ENST00000600237 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
SYMPK-215ENST00000600237 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
SYMPK-215ENST00000600237 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
SYMPK-215ENST00000600237 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
SYMPK-215ENST00000600237 CT47A1Q5JQC4 288 aaPredicted RBP17.19■□□□□ 0.34
SYMPK-215ENST00000600237 CWC15Q9P013 229 aaKnown RBP17.19■□□□□ 0.34
SYMPK-215ENST00000600237 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms