RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SPATA31A1Q5TZJ5 1347 aa25.93■■□□□ 1.74
CCDC9-205ENST00000600117 YY1P25490 414 aa25.92■■□□□ 1.74
CCDC9-205ENST00000600117 NME9Q86XW9 330 aa25.92■■□□□ 1.74
CCDC9-205ENST00000600117 ABTB2Q8N961 1025 aa25.92■■□□□ 1.74
CCDC9-205ENST00000600117 USP54Q70EL1 1684 aa25.92■■□□□ 1.74
CCDC9-205ENST00000600117 RREB1Q92766 1687 aa25.91■■□□□ 1.74
CCDC9-205ENST00000600117 PER1O15534 1290 aaPredicted RBP25.91■■□□□ 1.74
CCDC9-205ENST00000600117 APBA3O96018 575 aa25.91■■□□□ 1.74
CCDC9-205ENST00000600117 USP31Q70CQ4 1352 aa25.9■■□□□ 1.74
CCDC9-205ENST00000600117 KIF20BQ96Q89 1820 aa25.9■■□□□ 1.74
CCDC9-205ENST00000600117 NUTM2GQ5VZR2 741 aa25.89■■□□□ 1.74
CCDC9-205ENST00000600117 FYB1O15117 783 aa25.88■■□□□ 1.73
CCDC9-205ENST00000600117 NUP188Q5SRE5 1749 aa25.88■■□□□ 1.73
CCDC9-205ENST00000600117 OVOS2A0A0J9YW53 1432 aa25.88■■□□□ 1.73
CCDC9-205ENST00000600117 OVOS2Q6IE36 1432 aa25.88■■□□□ 1.73
CCDC9-205ENST00000600117 USP19O94966 1318 aa25.88■■□□□ 1.73
CCDC9-205ENST00000600117 KIAA0232Q92628 1395 aa25.87■■□□□ 1.73
CCDC9-205ENST00000600117 PHRF1Q9P1Y6 1649 aaKnown RBP25.86■■□□□ 1.73
CCDC9-205ENST00000600117 NLRP6P59044 892 aa25.86■■□□□ 1.73
CCDC9-205ENST00000600117 DDX10Q13206 875 aaKnown RBP25.86■■□□□ 1.73
CCDC9-205ENST00000600117 NLRP13Q86W25 1043 aa25.86■■□□□ 1.73
CCDC9-205ENST00000600117 SLIT3O75094 1523 aa25.86■■□□□ 1.73
CCDC9-205ENST00000600117 KNSTRNQ9Y448 316 aa25.85■■□□□ 1.73
CCDC9-205ENST00000600117 CGNL1Q0VF96 1302 aa25.85■■□□□ 1.73
CCDC9-205ENST00000600117 NBPF14Q5TI25 921 aa25.84■■□□□ 1.73
CCDC9-205ENST00000600117 STRN4Q9NRL3 753 aa25.84■■□□□ 1.73
CCDC9-205ENST00000600117 CHRNA2Q15822 529 aa25.83■■□□□ 1.73
CCDC9-205ENST00000600117 AMER1Q5JTC6 1135 aaPredicted RBP25.83■■□□□ 1.73
CCDC9-205ENST00000600117 GGNBP2Q9H3C7 697 aa25.83■■□□□ 1.73
CCDC9-205ENST00000600117 ANKRD26Q9UPS8 1709 aa25.81■■□□□ 1.72
CCDC9-205ENST00000600117 PDE3BQ13370 1112 aa25.81■■□□□ 1.72
CCDC9-205ENST00000600117 BARGINQ6ZT62 677 aa25.81■■□□□ 1.72
CCDC9-205ENST00000600117 NSD2O96028 1365 aa25.8■■□□□ 1.72
CCDC9-205ENST00000600117 NPC1L1Q9UHC9 1359 aa25.79■■□□□ 1.72
CCDC9-205ENST00000600117 COG3Q96JB2 828 aa25.78■■□□□ 1.72
CCDC9-205ENST00000600117 SPON1Q9HCB6 807 aa25.78■■□□□ 1.72
CCDC9-205ENST00000600117 USP35Q9P2H5 1018 aa25.78■■□□□ 1.72
CCDC9-205ENST00000600117 PPP1R1BQ9UD71 204 aaPredicted RBP25.78■■□□□ 1.72
CCDC9-205ENST00000600117 NFAT5O94916 1531 aa25.78■■□□□ 1.72
CCDC9-205ENST00000600117 DCAF8L1A6NGE4 600 aa25.77■■□□□ 1.72
CCDC9-205ENST00000600117 GCP02774 474 aa25.77■■□□□ 1.72
CCDC9-205ENST00000600117 ZC3H6P61129 1189 aaKnown RBP25.77■■□□□ 1.72
CCDC9-205ENST00000600117 KCNQ2O43526 872 aa25.75■■□□□ 1.71
CCDC9-205ENST00000600117 EVA1CP58658 441 aa25.75■■□□□ 1.71
CCDC9-205ENST00000600117 KCNH5Q8NCM2 988 aa25.73■■□□□ 1.71
CCDC9-205ENST00000600117 CAMTA1Q9Y6Y1 1673 aa25.72■■□□□ 1.71
CCDC9-205ENST00000600117 TCP11L2Q8N4U5 519 aa25.72■■□□□ 1.71
CCDC9-205ENST00000600117 UTRNP46939 3433 aa25.72■■□□□ 1.71
CCDC9-205ENST00000600117 CPDO75976 1380 aa25.71■■□□□ 1.71
CCDC9-205ENST00000600117 SOX12O15370 315 aa25.7■■□□□ 1.7
CCDC9-205ENST00000600117 CC2D1BQ5T0F9 858 aaKnown RBP25.7■■□□□ 1.7
CCDC9-205ENST00000600117 LARP1Q6PKG0 1096 aaKnown RBP25.7■■□□□ 1.7
CCDC9-205ENST00000600117 LMO7Q8WWI1 1683 aa25.7■■□□□ 1.7
CCDC9-205ENST00000600117 PARP4Q9UKK3 1724 aaKnown RBP25.69■■□□□ 1.7
CCDC9-205ENST00000600117 THRAP3Q9Y2W1 955 aaKnown RBP25.69■■□□□ 1.7
CCDC9-205ENST00000600117 FBLN1P23142 703 aa25.68■■□□□ 1.7
CCDC9-205ENST00000600117 RGPD3A6NKT7 1758 aaPredicted RBP25.68■■□□□ 1.7
CCDC9-205ENST00000600117 RGPD4Q7Z3J3 1758 aa25.68■■□□□ 1.7
CCDC9-205ENST00000600117 MORC1Q86VD1 984 aa25.67■■□□□ 1.7
CCDC9-205ENST00000600117 ARHGEF25Q86VW2 580 aa25.67■■□□□ 1.7
CCDC9-205ENST00000600117 AATKQ6ZMQ8 1374 aa25.66■■□□□ 1.7
CCDC9-205ENST00000600117 LTN1O94822 1766 aa25.65■■□□□ 1.7
CCDC9-205ENST00000600117 COL18A1P39060 1754 aa25.65■■□□□ 1.7
CCDC9-205ENST00000600117 MAP3K19Q56UN5 1328 aa25.63■■□□□ 1.69
CCDC9-205ENST00000600117 PEAK1Q9H792 1746 aa25.63■■□□□ 1.69
CCDC9-205ENST00000600117 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
CCDC9-205ENST00000600117 SBF2Q86WG5 1849 aa25.63■■□□□ 1.69
CCDC9-205ENST00000600117 CASZ1Q86V15 1759 aa25.62■■□□□ 1.69
CCDC9-205ENST00000600117 PLSCR1O15162 318 aa25.62■■□□□ 1.69
CCDC9-205ENST00000600117 OVOS2A0A0G2JMS6 1433 aa25.62■■□□□ 1.69
CCDC9-205ENST00000600117 TNNT2P45379 298 aaPredicted RBP25.61■■□□□ 1.69
CCDC9-205ENST00000600117 RRS1Q15050 365 aaKnown RBP25.61■■□□□ 1.69
CCDC9-205ENST00000600117 ABCC6O95255 1503 aa25.61■■□□□ 1.69
CCDC9-205ENST00000600117 MAP2P11137 1827 aaKnown RBP25.6■■□□□ 1.69
CCDC9-205ENST00000600117 COL5A2P05997 1499 aaPredicted RBP25.6■■□□□ 1.69
CCDC9-205ENST00000600117 ZBTB7CA1YPR0 619 aa25.59■■□□□ 1.69
CCDC9-205ENST00000600117 SMG6Q86US8 1419 aaKnown RBP25.58■■□□□ 1.69
CCDC9-205ENST00000600117 POLKQ9UBT6 870 aa25.58■■□□□ 1.69
CCDC9-205ENST00000600117 EMILIN1Q9Y6C2 1016 aa25.58■■□□□ 1.69
CCDC9-205ENST00000600117 CRB1P82279 1406 aa25.57■■□□□ 1.68
CCDC9-205ENST00000600117 RTL1A6NKG5 1358 aa25.56■■□□□ 1.68
CCDC9-205ENST00000600117 ANO8Q9HCE9 1232 aaPredicted RBP25.56■■□□□ 1.68
CCDC9-205ENST00000600117 RGPD5Q99666 1765 aa25.56■■□□□ 1.68
CCDC9-205ENST00000600117 KIF24Q5T7B8 1368 aa25.56■■□□□ 1.68
CCDC9-205ENST00000600117 IP6K1Q92551 441 aa25.55■■□□□ 1.68
CCDC9-205ENST00000600117 AXIN2Q9Y2T1 843 aa25.55■■□□□ 1.68
CCDC9-205ENST00000600117 LRRC37A3O60309 1634 aa25.55■■□□□ 1.68
CCDC9-205ENST00000600117 HOXC9P31274 260 aa25.53■■□□□ 1.68
CCDC9-205ENST00000600117 AMPHP49418 695 aa25.53■■□□□ 1.68
CCDC9-205ENST00000600117 BCL11BQ9C0K0 894 aaPredicted RBP25.53■■□□□ 1.68
CCDC9-205ENST00000600117 RALBP1Q15311 655 aa25.52■■□□□ 1.68
CCDC9-205ENST00000600117 ZNF784Q8NCA9 323 aaPredicted RBP25.52■■□□□ 1.68
CCDC9-205ENST00000600117 FLT4P35916 1363 aa25.52■■□□□ 1.68
CCDC9-205ENST00000600117 PPP2R1AP30153 589 aa25.51■■□□□ 1.67
CCDC9-205ENST00000600117 DDB1Q16531 1140 aa25.51■■□□□ 1.67
CCDC9-205ENST00000600117 PRKRIP1Q9H875 184 aaPredicted RBP25.51■■□□□ 1.67
CCDC9-205ENST00000600117 PDGFDQ9GZP0 370 aaPredicted RBP25.5■■□□□ 1.67
CCDC9-205ENST00000600117 CHD4Q14839 1912 aa25.49■■□□□ 1.67
CCDC9-205ENST00000600117 INSRP06213 1382 aa25.49■■□□□ 1.67
CCDC9-205ENST00000600117 ZBTB7AO95365 584 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms