RNA–Protein interactions for RNA: ENST00000599946.2

AC009041.1-202, humanhuman

TSL 5 BASIC

Gene AC009041.1, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-202ENST00000599946 GLI3P10071 1580 aa17.91■□□□□ 0.46
AC009041.1-202ENST00000599946 PLCH1Q4KWH8 1693 aa17.91■□□□□ 0.46
AC009041.1-202ENST00000599946 FAM98CQ17RN3 349 aaKnown RBP17.91■□□□□ 0.46
AC009041.1-202ENST00000599946 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
AC009041.1-202ENST00000599946 ABCC6O95255 1503 aa17.9■□□□□ 0.46
AC009041.1-202ENST00000599946 IP6K1Q92551 441 aa17.9■□□□□ 0.46
AC009041.1-202ENST00000599946 WDR17Q8IZU2 1322 aa17.9■□□□□ 0.46
AC009041.1-202ENST00000599946 USP54Q70EL1 1684 aa17.9■□□□□ 0.46
AC009041.1-202ENST00000599946 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
AC009041.1-202ENST00000599946 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
AC009041.1-202ENST00000599946 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
AC009041.1-202ENST00000599946 CRB1P82279 1406 aa17.89■□□□□ 0.45
AC009041.1-202ENST00000599946 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
AC009041.1-202ENST00000599946 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
AC009041.1-202ENST00000599946 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
AC009041.1-202ENST00000599946 A0A0G2JS52 829 aa17.87■□□□□ 0.45
AC009041.1-202ENST00000599946 MYT1Q01538 1121 aa17.87■□□□□ 0.45
AC009041.1-202ENST00000599946 KRT27Q7Z3Y8 459 aa17.87■□□□□ 0.45
AC009041.1-202ENST00000599946 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
AC009041.1-202ENST00000599946 CARD10Q9BWT7 1032 aa17.87■□□□□ 0.45
AC009041.1-202ENST00000599946 ERBB3P21860 1342 aa17.87■□□□□ 0.45
AC009041.1-202ENST00000599946 AMPHP49418 695 aa17.86■□□□□ 0.45
AC009041.1-202ENST00000599946 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
AC009041.1-202ENST00000599946 CCDC7Q96M83 1385 aa17.86■□□□□ 0.45
AC009041.1-202ENST00000599946 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
AC009041.1-202ENST00000599946 MYOM1P52179 1685 aa17.86■□□□□ 0.45
AC009041.1-202ENST00000599946 RTL1A6NKG5 1358 aa17.85■□□□□ 0.45
AC009041.1-202ENST00000599946 NSD2O96028 1365 aa17.85■□□□□ 0.45
AC009041.1-202ENST00000599946 HOXC9P31274 260 aa17.85■□□□□ 0.45
AC009041.1-202ENST00000599946 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
AC009041.1-202ENST00000599946 WASHC2AQ641Q2 1341 aa17.85■□□□□ 0.45
AC009041.1-202ENST00000599946 CDCA7Q9BWT1 371 aaPredicted RBP17.85■□□□□ 0.45
AC009041.1-202ENST00000599946 FBLN1P23142 703 aa17.84■□□□□ 0.45
AC009041.1-202ENST00000599946 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
AC009041.1-202ENST00000599946 ANKRD24Q8TF21 1146 aa17.84■□□□□ 0.45
AC009041.1-202ENST00000599946 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.44
AC009041.1-202ENST00000599946 COL18A1P39060 1754 aa17.82■□□□□ 0.44
AC009041.1-202ENST00000599946 PER1O15534 1290 aaPredicted RBP17.81■□□□□ 0.44
AC009041.1-202ENST00000599946 CCDC125Q86Z20 511 aa17.81■□□□□ 0.44
AC009041.1-202ENST00000599946 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
AC009041.1-202ENST00000599946 NLRP2Q9NX02 1062 aa17.8■□□□□ 0.44
AC009041.1-202ENST00000599946 FLT4P35916 1363 aa17.79■□□□□ 0.44
AC009041.1-202ENST00000599946 PDE3BQ13370 1112 aa17.79■□□□□ 0.44
AC009041.1-202ENST00000599946 INSRP06213 1382 aa17.78■□□□□ 0.44
AC009041.1-202ENST00000599946 MORC1Q86VD1 984 aa17.77■□□□□ 0.44
AC009041.1-202ENST00000599946 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
AC009041.1-202ENST00000599946 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
AC009041.1-202ENST00000599946 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.43
AC009041.1-202ENST00000599946 DDB1Q16531 1140 aa17.76■□□□□ 0.43
AC009041.1-202ENST00000599946 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
AC009041.1-202ENST00000599946 FAM196AQ6ZSG2 479 aa17.76■□□□□ 0.43
AC009041.1-202ENST00000599946 LTV1Q96GA3 475 aaPredicted RBP17.76■□□□□ 0.43
AC009041.1-202ENST00000599946 NPC1L1Q9UHC9 1359 aa17.76■□□□□ 0.43
AC009041.1-202ENST00000599946 DISP2A7MBM2 1401 aa17.75■□□□□ 0.43
AC009041.1-202ENST00000599946 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
AC009041.1-202ENST00000599946 EXOC5O00471 708 aa17.74■□□□□ 0.43
AC009041.1-202ENST00000599946 IL2RBP14784 551 aa17.74■□□□□ 0.43
AC009041.1-202ENST00000599946 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
AC009041.1-202ENST00000599946 TNNT2P45379 298 aaPredicted RBP17.72■□□□□ 0.43
AC009041.1-202ENST00000599946 SF3B2Q13435 895 aaKnown RBP17.72■□□□□ 0.43
AC009041.1-202ENST00000599946 NBPF6Q5VWK0 638 aa17.71■□□□□ 0.43
AC009041.1-202ENST00000599946 NBPF4Q96M43 638 aa17.71■□□□□ 0.43
AC009041.1-202ENST00000599946 FAM182BQ5T319 152 aa17.7■□□□□ 0.42
AC009041.1-202ENST00000599946 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
AC009041.1-202ENST00000599946 BCL9O00512 1426 aa17.69■□□□□ 0.42
AC009041.1-202ENST00000599946 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
AC009041.1-202ENST00000599946 LTN1O94822 1766 aa17.68■□□□□ 0.42
AC009041.1-202ENST00000599946 OVOS2A0A0G2JMS6 1433 aa17.67■□□□□ 0.42
AC009041.1-202ENST00000599946 TNS2Q63HR2 1409 aa17.67■□□□□ 0.42
AC009041.1-202ENST00000599946 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
AC009041.1-202ENST00000599946 EIF4A2Q14240 407 aaKnown RBP17.66■□□□□ 0.42
AC009041.1-202ENST00000599946 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
AC009041.1-202ENST00000599946 BAG6P46379 1132 aa17.65■□□□□ 0.42
AC009041.1-202ENST00000599946 PARP4Q9UKK3 1724 aaKnown RBP17.64■□□□□ 0.41
AC009041.1-202ENST00000599946 TRIM37O94972 964 aa17.64■□□□□ 0.41
AC009041.1-202ENST00000599946 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
AC009041.1-202ENST00000599946 EYA1Q99502 592 aa17.64■□□□□ 0.41
AC009041.1-202ENST00000599946 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
AC009041.1-202ENST00000599946 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
AC009041.1-202ENST00000599946 PEAK1Q9H792 1746 aa17.63■□□□□ 0.41
AC009041.1-202ENST00000599946 BRWD3Q6RI45 1802 aa17.63■□□□□ 0.41
AC009041.1-202ENST00000599946 NCAPD2Q15021 1401 aa17.63■□□□□ 0.41
AC009041.1-202ENST00000599946 EP400Q96L91 3159 aa17.62■□□□□ 0.41
AC009041.1-202ENST00000599946 RGPD5Q99666 1765 aa17.62■□□□□ 0.41
AC009041.1-202ENST00000599946 MTHFSP49914 203 aa17.62■□□□□ 0.41
AC009041.1-202ENST00000599946 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
AC009041.1-202ENST00000599946 BCL11BQ9C0K0 894 aaPredicted RBP17.61■□□□□ 0.41
AC009041.1-202ENST00000599946 IGSF1Q8N6C5 1336 aa17.61■□□□□ 0.41
AC009041.1-202ENST00000599946 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
AC009041.1-202ENST00000599946 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
AC009041.1-202ENST00000599946 MEGF6O75095 1541 aa17.6■□□□□ 0.41
AC009041.1-202ENST00000599946 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
AC009041.1-202ENST00000599946 ANKRD26Q9UPS8 1709 aa17.6■□□□□ 0.41
AC009041.1-202ENST00000599946 APBA3O96018 575 aa17.59■□□□□ 0.41
AC009041.1-202ENST00000599946 IL13P35225 146 aa17.59■□□□□ 0.41
AC009041.1-202ENST00000599946 DDX54Q8TDD1 881 aaKnown RBP17.59■□□□□ 0.41
AC009041.1-202ENST00000599946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
AC009041.1-202ENST00000599946 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
AC009041.1-202ENST00000599946 EN1Q05925 392 aaPredicted RBP17.57■□□□□ 0.4
AC009041.1-202ENST00000599946 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms