RNA–Protein interactions for RNA: ENST00000598913.5

SAMD4B-208, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SAMD4B, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-208ENST00000598913 C16orf71Q8IYS4 520 aaPredicted RBP28.53■■■□□ 2.16
SAMD4B-208ENST00000598913 FAM135BQ49AJ0 1406 aa28.51■■■□□ 2.16
SAMD4B-208ENST00000598913 RIMS2Q9UQ26 1411 aa28.51■■■□□ 2.15
SAMD4B-208ENST00000598913 COG3Q96JB2 828 aa28.51■■■□□ 2.15
SAMD4B-208ENST00000598913 SULT6B1Q6IMI4 303 aa28.5■■■□□ 2.15
SAMD4B-208ENST00000598913 MAP2P11137 1827 aaKnown RBP28.49■■■□□ 2.15
SAMD4B-208ENST00000598913 ALDH1L2Q3SY69 923 aa28.48■■■□□ 2.15
SAMD4B-208ENST00000598913 PANK2Q9BZ23 570 aa28.48■■■□□ 2.15
SAMD4B-208ENST00000598913 PNNQ9H307 717 aaKnown RBP28.48■■■□□ 2.15
SAMD4B-208ENST00000598913 OTUD7AQ8TE49 926 aaPredicted RBP28.48■■■□□ 2.15
SAMD4B-208ENST00000598913 MCM4P33991 863 aa28.47■■■□□ 2.15
SAMD4B-208ENST00000598913 HSCBQ8IWL3 235 aa28.47■■■□□ 2.15
SAMD4B-208ENST00000598913 PRR36Q9H6K5 1346 aa28.47■■■□□ 2.15
SAMD4B-208ENST00000598913 GNAI1P63096 354 aa28.45■■■□□ 2.15
SAMD4B-208ENST00000598913 CPS1P31327 1500 aa28.45■■■□□ 2.15
SAMD4B-208ENST00000598913 HSP90AB2PQ58FF8 381 aa28.45■■■□□ 2.14
SAMD4B-208ENST00000598913 A2ML1A8K2U0 1454 aa28.45■■■□□ 2.14
SAMD4B-208ENST00000598913 FOXO3O43524 673 aa28.44■■■□□ 2.14
SAMD4B-208ENST00000598913 SMARCA5O60264 1052 aaPredicted RBP28.44■■■□□ 2.14
SAMD4B-208ENST00000598913 NCBP3Q53F19 620 aaKnown RBP28.44■■■□□ 2.14
SAMD4B-208ENST00000598913 TBC1D9Q6ZT07 1266 aa28.44■■■□□ 2.14
SAMD4B-208ENST00000598913 SLC26A8Q96RN1 970 aa28.42■■■□□ 2.14
SAMD4B-208ENST00000598913 MED14O60244 1454 aa28.42■■■□□ 2.14
SAMD4B-208ENST00000598913 CCDC61Q9Y6R9 512 aa28.42■■■□□ 2.14
SAMD4B-208ENST00000598913 ESF1Q9H501 851 aaKnown RBP28.41■■■□□ 2.14
SAMD4B-208ENST00000598913 IFT57Q9NWB7 429 aa28.41■■■□□ 2.14
SAMD4B-208ENST00000598913 ZNF853P0CG23 659 aa28.4■■■□□ 2.14
SAMD4B-208ENST00000598913 EIF4A2Q14240 407 aaKnown RBP28.4■■■□□ 2.14
SAMD4B-208ENST00000598913 KIF2CQ99661 725 aa28.4■■■□□ 2.14
SAMD4B-208ENST00000598913 CHMP5Q9NZZ3 219 aa28.4■■■□□ 2.14
SAMD4B-208ENST00000598913 HSP90AB1P08238 724 aaKnown RBP28.39■■■□□ 2.14
SAMD4B-208ENST00000598913 NECTIN2Q92692 538 aa28.39■■■□□ 2.14
SAMD4B-208ENST00000598913 CFAP44Q96MT7 982 aa28.39■■■□□ 2.14
SAMD4B-208ENST00000598913 CEBPAP49715 358 aaPredicted RBP28.39■■■□□ 2.13
SAMD4B-208ENST00000598913 TRAK2O60296 914 aa28.38■■■□□ 2.13
SAMD4B-208ENST00000598913 HSP90AA1P07900 732 aaKnown RBP28.37■■■□□ 2.13
SAMD4B-208ENST00000598913 GSPT1P15170 499 aaKnown RBP28.37■■■□□ 2.13
SAMD4B-208ENST00000598913 CLTCQ00610 1675 aaKnown RBP28.37■■■□□ 2.13
SAMD4B-208ENST00000598913 ZNF692Q9BU19 519 aaPredicted RBP28.37■■■□□ 2.13
SAMD4B-208ENST00000598913 KIF20BQ96Q89 1820 aa28.37■■■□□ 2.13
SAMD4B-208ENST00000598913 NUTM2GQ5VZR2 741 aa28.36■■■□□ 2.13
SAMD4B-208ENST00000598913 PLEKHG5O94827 1062 aa28.36■■■□□ 2.13
SAMD4B-208ENST00000598913 F6X3S4 739 aa28.36■■■□□ 2.13
SAMD4B-208ENST00000598913 XRCC6P12956 609 aaKnown RBP eCLIP28.36■■■□□ 2.13
SAMD4B-208ENST00000598913 ANKRD26Q9UPS8 1709 aa28.35■■■□□ 2.13
SAMD4B-208ENST00000598913 SLC4A10Q6U841 1118 aa28.34■■■□□ 2.13
SAMD4B-208ENST00000598913 BMP2KLQ5H9B9 411 aa28.34■■■□□ 2.13
SAMD4B-208ENST00000598913 ABCC4O15439 1325 aa28.34■■■□□ 2.13
SAMD4B-208ENST00000598913 EIF5BO60841 1220 aaKnown RBP28.33■■■□□ 2.13
SAMD4B-208ENST00000598913 CPSF1Q10570 1443 aaKnown RBP28.33■■■□□ 2.13
SAMD4B-208ENST00000598913 TSHZ3Q63HK5 1081 aa28.33■■■□□ 2.13
SAMD4B-208ENST00000598913 TNPO1Q92973 898 aaKnown RBP28.32■■■□□ 2.12
SAMD4B-208ENST00000598913 MEIS3Q99687 375 aa28.32■■■□□ 2.12
SAMD4B-208ENST00000598913 ACEP12821 1306 aa28.32■■■□□ 2.12
SAMD4B-208ENST00000598913 EDC4Q6P2E9 1401 aaKnown RBP28.32■■■□□ 2.12
SAMD4B-208ENST00000598913 RRAGDQ9NQL2 400 aaPredicted RBP28.31■■■□□ 2.12
SAMD4B-208ENST00000598913 ROBO2Q9HCK4 1378 aa28.31■■■□□ 2.12
SAMD4B-208ENST00000598913 RBM25P49756 843 aaKnown RBP28.31■■■□□ 2.12
SAMD4B-208ENST00000598913 G2E3Q7L622 706 aa28.31■■■□□ 2.12
SAMD4B-208ENST00000598913 GCC1Q96CN9 775 aa28.29■■■□□ 2.12
SAMD4B-208ENST00000598913 ZMYM3Q14202 1370 aa28.29■■■□□ 2.12
SAMD4B-208ENST00000598913 PLEKHM2Q8IWE5 1019 aa28.29■■■□□ 2.12
SAMD4B-208ENST00000598913 ATP7BP35670 1465 aa28.29■■■□□ 2.12
SAMD4B-208ENST00000598913 GAS2L2Q8NHY3 880 aa28.29■■■□□ 2.12
SAMD4B-208ENST00000598913 CALD1Q05682 793 aaKnown RBP28.28■■■□□ 2.12
SAMD4B-208ENST00000598913 GOLGA6L3A6NEY3 463 aa28.28■■■□□ 2.12
SAMD4B-208ENST00000598913 LTKP29376 864 aa28.28■■■□□ 2.12
SAMD4B-208ENST00000598913 SLC4A2P04920 1241 aa28.27■■■□□ 2.12
SAMD4B-208ENST00000598913 TTC21BQ7Z4L5 1316 aa28.26■■■□□ 2.11
SAMD4B-208ENST00000598913 ARHGAP45Q92619 1136 aa28.26■■■□□ 2.11
SAMD4B-208ENST00000598913 CHAMP1Q96JM3 812 aa28.26■■■□□ 2.11
SAMD4B-208ENST00000598913 PTCH1Q13635 1447 aa28.26■■■□□ 2.11
SAMD4B-208ENST00000598913 SSFA2P28290 1259 aa28.25■■■□□ 2.11
SAMD4B-208ENST00000598913 API5Q9BZZ5 524 aaKnown RBP28.25■■■□□ 2.11
SAMD4B-208ENST00000598913 DLG5Q8TDM6 1919 aa28.24■■■□□ 2.11
SAMD4B-208ENST00000598913 BRPF1P55201 1214 aaPredicted RBP28.24■■■□□ 2.11
SAMD4B-208ENST00000598913 LTV1Q96GA3 475 aaPredicted RBP28.24■■■□□ 2.11
SAMD4B-208ENST00000598913 RBM33Q96EV2 1170 aaKnown RBP28.23■■■□□ 2.11
SAMD4B-208ENST00000598913 MSH6P52701 1360 aa28.23■■■□□ 2.11
SAMD4B-208ENST00000598913 RIMBP3CA6NJZ7 1639 aa28.22■■■□□ 2.11
SAMD4B-208ENST00000598913 RIMBP3BA6NNM3 1639 aa28.22■■■□□ 2.11
SAMD4B-208ENST00000598913 RIMBP3Q9UFD9 1639 aa28.22■■■□□ 2.11
SAMD4B-208ENST00000598913 ZNF428Q96B54 188 aa28.21■■■□□ 2.11
SAMD4B-208ENST00000598913 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
SAMD4B-208ENST00000598913 MTHFSDQ2M296 383 aaKnown RBP28.2■■■□□ 2.11
SAMD4B-208ENST00000598913 CDK12Q9NYV4 1490 aaPredicted RBP28.2■■■□□ 2.1
SAMD4B-208ENST00000598913 PKP1Q13835 747 aa28.2■■■□□ 2.1
SAMD4B-208ENST00000598913 GAS2L3Q86XJ1 694 aa28.2■■■□□ 2.1
SAMD4B-208ENST00000598913 CDC45O75419 566 aa28.19■■■□□ 2.1
SAMD4B-208ENST00000598913 DDIT3P35638 169 aa28.19■■■□□ 2.1
SAMD4B-208ENST00000598913 CEP85Q6P2H3 762 aa28.19■■■□□ 2.1
SAMD4B-208ENST00000598913 MAP3K19Q56UN5 1328 aa28.19■■■□□ 2.1
SAMD4B-208ENST00000598913 FOXD4L5Q5VV16 416 aaPredicted RBP28.19■■■□□ 2.1
SAMD4B-208ENST00000598913 FOXD4L4Q8WXT5 416 aaPredicted RBP28.19■■■□□ 2.1
SAMD4B-208ENST00000598913 CDC42BPGQ6DT37 1551 aa28.19■■■□□ 2.1
SAMD4B-208ENST00000598913 DCTPP1Q9H773 170 aa28.18■■■□□ 2.1
SAMD4B-208ENST00000598913 PIK3R4Q99570 1358 aa28.18■■■□□ 2.1
SAMD4B-208ENST00000598913 AK9Q5TCS8 1911 aa28.18■■■□□ 2.1
SAMD4B-208ENST00000598913 KNDC1Q76NI1 1749 aa28.17■■■□□ 2.1
SAMD4B-208ENST00000598913 NRXN3Q9Y4C0 1643 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms