RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 NME9Q86XW9 330 aa15.78■□□□□ 0.12
GRAMD1A-209ENST00000598580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.78■□□□□ 0.12
GRAMD1A-209ENST00000598580 CARD10Q9BWT7 1032 aa15.78■□□□□ 0.12
GRAMD1A-209ENST00000598580 PDGFDQ9GZP0 370 aaPredicted RBP15.78■□□□□ 0.12
GRAMD1A-209ENST00000598580 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
GRAMD1A-209ENST00000598580 RREB1Q92766 1687 aa15.78■□□□□ 0.12
GRAMD1A-209ENST00000598580 NFAT5O94916 1531 aa15.78■□□□□ 0.12
GRAMD1A-209ENST00000598580 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.12
GRAMD1A-209ENST00000598580 TTC21AQ8NDW8 1320 aa15.77■□□□□ 0.12
GRAMD1A-209ENST00000598580 LRRC37A3O60309 1634 aa15.77■□□□□ 0.12
GRAMD1A-209ENST00000598580 KCNH5Q8NCM2 988 aa15.77■□□□□ 0.12
GRAMD1A-209ENST00000598580 SLC12A5Q9H2X9 1139 aa15.77■□□□□ 0.12
GRAMD1A-209ENST00000598580 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
GRAMD1A-209ENST00000598580 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.11
GRAMD1A-209ENST00000598580 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.11
GRAMD1A-209ENST00000598580 SBNO2Q9Y2G9 1366 aa15.76■□□□□ 0.11
GRAMD1A-209ENST00000598580 PLSCR1O15162 318 aa15.76■□□□□ 0.11
GRAMD1A-209ENST00000598580 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
GRAMD1A-209ENST00000598580 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
GRAMD1A-209ENST00000598580 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
GRAMD1A-209ENST00000598580 CARD11Q9BXL7 1154 aa15.75■□□□□ 0.11
GRAMD1A-209ENST00000598580 AKAP12Q02952 1782 aa15.75■□□□□ 0.11
GRAMD1A-209ENST00000598580 KCNQ2O43526 872 aa15.74■□□□□ 0.11
GRAMD1A-209ENST00000598580 CSB-PGBD3P0DP91 1061 aa15.74■□□□□ 0.11
GRAMD1A-209ENST00000598580 RGPD5Q99666 1765 aa15.73■□□□□ 0.11
GRAMD1A-209ENST00000598580 BCL9O00512 1426 aa15.73■□□□□ 0.11
GRAMD1A-209ENST00000598580 C11orf95C9JLR9 678 aaPredicted RBP15.72■□□□□ 0.11
GRAMD1A-209ENST00000598580 TMC1Q8TDI8 760 aa15.72■□□□□ 0.11
GRAMD1A-209ENST00000598580 CDCA7Q9BWT1 371 aaPredicted RBP15.72■□□□□ 0.11
GRAMD1A-209ENST00000598580 SBF2Q86WG5 1849 aa15.71■□□□□ 0.11
GRAMD1A-209ENST00000598580 EXOC5O00471 708 aa15.71■□□□□ 0.11
GRAMD1A-209ENST00000598580 TESK2Q96S53 571 aa15.71■□□□□ 0.11
GRAMD1A-209ENST00000598580 ERBB3P21860 1342 aa15.69■□□□□ 0.1
GRAMD1A-209ENST00000598580 FBLN1P23142 703 aa15.69■□□□□ 0.1
GRAMD1A-209ENST00000598580 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
GRAMD1A-209ENST00000598580 SPON1Q9HCB6 807 aa15.69■□□□□ 0.1
GRAMD1A-209ENST00000598580 MON2Q7Z3U7 1717 aa15.68■□□□□ 0.1
GRAMD1A-209ENST00000598580 A0A1W2PP64 1363 aa15.68■□□□□ 0.1
GRAMD1A-209ENST00000598580 CCDC7Q96M83 1385 aa15.68■□□□□ 0.1
GRAMD1A-209ENST00000598580 NLRP2Q9NX02 1062 aa15.68■□□□□ 0.1
GRAMD1A-209ENST00000598580 WNK3Q9BYP7 1800 aa15.67■□□□□ 0.1
GRAMD1A-209ENST00000598580 ANKRD24Q8TF21 1146 aa15.67■□□□□ 0.1
GRAMD1A-209ENST00000598580 ACSBG1Q96GR2 724 aa15.67■□□□□ 0.1
GRAMD1A-209ENST00000598580 ST20-MTHFSA0A0A6YYL1 179 aa15.66■□□□□ 0.1
GRAMD1A-209ENST00000598580 PTGER2P43116 358 aa15.66■□□□□ 0.1
GRAMD1A-209ENST00000598580 ZBTB7AO95365 584 aa15.65■□□□□ 0.1
GRAMD1A-209ENST00000598580 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
GRAMD1A-209ENST00000598580 PUS7Q96PZ0 661 aaKnown RBP15.65■□□□□ 0.1
GRAMD1A-209ENST00000598580 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
GRAMD1A-209ENST00000598580 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
GRAMD1A-209ENST00000598580 ABCC6O95255 1503 aa15.64■□□□□ 0.09
GRAMD1A-209ENST00000598580 USP54Q70EL1 1684 aa15.64■□□□□ 0.09
GRAMD1A-209ENST00000598580 IL2RBP14784 551 aa15.64■□□□□ 0.09
GRAMD1A-209ENST00000598580 TONSLQ96HA7 1378 aa15.63■□□□□ 0.09
GRAMD1A-209ENST00000598580 RGPD3A6NKT7 1758 aaPredicted RBP15.63■□□□□ 0.09
GRAMD1A-209ENST00000598580 RGPD4Q7Z3J3 1758 aa15.63■□□□□ 0.09
GRAMD1A-209ENST00000598580 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
GRAMD1A-209ENST00000598580 IP6K1Q92551 441 aa15.63■□□□□ 0.09
GRAMD1A-209ENST00000598580 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
GRAMD1A-209ENST00000598580 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
GRAMD1A-209ENST00000598580 CASZ1Q86V15 1759 aa15.62■□□□□ 0.09
GRAMD1A-209ENST00000598580 LRRC4BQ9NT99 713 aa15.62■□□□□ 0.09
GRAMD1A-209ENST00000598580 LTV1Q96GA3 475 aaPredicted RBP15.61■□□□□ 0.09
GRAMD1A-209ENST00000598580 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
GRAMD1A-209ENST00000598580 PPP1R1BQ9UD71 204 aaPredicted RBP15.61■□□□□ 0.09
GRAMD1A-209ENST00000598580 STK32BQ9NY57 414 aa15.6■□□□□ 0.09
GRAMD1A-209ENST00000598580 MAP3K19Q56UN5 1328 aa15.6■□□□□ 0.09
GRAMD1A-209ENST00000598580 ZNF827Q17R98 1081 aa15.59■□□□□ 0.09
GRAMD1A-209ENST00000598580 NINLQ9Y2I6 1382 aa15.59■□□□□ 0.09
GRAMD1A-209ENST00000598580 LTN1O94822 1766 aa15.58■□□□□ 0.08
GRAMD1A-209ENST00000598580 HOXC9P31274 260 aa15.58■□□□□ 0.08
GRAMD1A-209ENST00000598580 YY1P25490 414 aa15.57■□□□□ 0.08
GRAMD1A-209ENST00000598580 KCNQ4P56696 695 aa15.57■□□□□ 0.08
GRAMD1A-209ENST00000598580 DDX54Q8TDD1 881 aaKnown RBP15.57■□□□□ 0.08
GRAMD1A-209ENST00000598580 FYB1O15117 783 aa15.56■□□□□ 0.08
GRAMD1A-209ENST00000598580 NHSQ6T4R5 1651 aa15.56■□□□□ 0.08
GRAMD1A-209ENST00000598580 RRS1Q15050 365 aaKnown RBP15.55■□□□□ 0.08
GRAMD1A-209ENST00000598580 NBPF6Q5VWK0 638 aa15.55■□□□□ 0.08
GRAMD1A-209ENST00000598580 COG3Q96JB2 828 aa15.55■□□□□ 0.08
GRAMD1A-209ENST00000598580 NBPF4Q96M43 638 aa15.55■□□□□ 0.08
GRAMD1A-209ENST00000598580 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
GRAMD1A-209ENST00000598580 PAPPAQ13219 1627 aa15.54■□□□□ 0.08
GRAMD1A-209ENST00000598580 PRIM1P49642 420 aaKnown RBP15.54■□□□□ 0.08
GRAMD1A-209ENST00000598580 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
GRAMD1A-209ENST00000598580 SYT17Q9BSW7 474 aa15.54■□□□□ 0.08
GRAMD1A-209ENST00000598580 FHDC1Q9C0D6 1143 aaPredicted RBP15.54■□□□□ 0.08
GRAMD1A-209ENST00000598580 MTFR1LQ9H019 292 aa15.54■□□□□ 0.08
GRAMD1A-209ENST00000598580 NSD2O96028 1365 aa15.53■□□□□ 0.08
GRAMD1A-209ENST00000598580 ANKRD36BQ8N2N9 1353 aa15.53■□□□□ 0.08
GRAMD1A-209ENST00000598580 MYOM1P52179 1685 aa15.53■□□□□ 0.08
GRAMD1A-209ENST00000598580 AMPHP49418 695 aa15.52■□□□□ 0.08
GRAMD1A-209ENST00000598580 USHBP1Q8N6Y0 703 aa15.52■□□□□ 0.08
GRAMD1A-209ENST00000598580 CARD14Q9BXL6 1004 aa15.52■□□□□ 0.08
GRAMD1A-209ENST00000598580 MEGF6O75095 1541 aa15.52■□□□□ 0.07
GRAMD1A-209ENST00000598580 BTAF1O14981 1849 aa15.52■□□□□ 0.07
GRAMD1A-209ENST00000598580 FAM208AQ9UK61 1670 aaKnown RBP15.51■□□□□ 0.07
GRAMD1A-209ENST00000598580 UTRNP46939 3433 aa15.5■□□□□ 0.07
GRAMD1A-209ENST00000598580 USP47Q96K76 1375 aa15.5■□□□□ 0.07
GRAMD1A-209ENST00000598580 HSP90AB2PQ58FF8 381 aa15.5■□□□□ 0.07
GRAMD1A-209ENST00000598580 ZCRB1Q8TBF4 217 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 243.8 ms