RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 A0A0G2JS52 829 aa31.63■■■□□ 2.65
IRF3-220ENST00000598108 MYT1Q01538 1121 aa31.63■■■□□ 2.65
IRF3-220ENST00000598108 GGNBP2Q9H3C7 697 aa31.63■■■□□ 2.65
IRF3-220ENST00000598108 FBLN1P23142 703 aa31.62■■■□□ 2.65
IRF3-220ENST00000598108 COL18A1P39060 1754 aa31.6■■■□□ 2.65
IRF3-220ENST00000598108 USP54Q70EL1 1684 aa31.6■■■□□ 2.65
IRF3-220ENST00000598108 TCP11L2Q8N4U5 519 aa31.59■■■□□ 2.65
IRF3-220ENST00000598108 MYOM1P52179 1685 aa31.59■■■□□ 2.65
IRF3-220ENST00000598108 NSD3Q9BZ95 1437 aa31.58■■■□□ 2.65
IRF3-220ENST00000598108 KRT27Q7Z3Y8 459 aa31.58■■■□□ 2.65
IRF3-220ENST00000598108 BARGINQ6ZT62 677 aa31.57■■■□□ 2.64
IRF3-220ENST00000598108 WDR17Q8IZU2 1322 aa31.55■■■□□ 2.64
IRF3-220ENST00000598108 TOM1L2Q6ZVM7 507 aa31.55■■■□□ 2.64
IRF3-220ENST00000598108 PANK3Q9H999 370 aa31.55■■■□□ 2.64
IRF3-220ENST00000598108 CRB1P82279 1406 aa31.54■■■□□ 2.64
IRF3-220ENST00000598108 KIF7Q2M1P5 1343 aa31.52■■■□□ 2.64
IRF3-220ENST00000598108 CSB-PGBD3P0DP91 1061 aa31.52■■■□□ 2.64
IRF3-220ENST00000598108 THRAP3Q9Y2W1 955 aaKnown RBP31.52■■■□□ 2.64
IRF3-220ENST00000598108 MAP3K19Q56UN5 1328 aa31.51■■■□□ 2.64
IRF3-220ENST00000598108 EP400Q96L91 3159 aa31.51■■■□□ 2.64
IRF3-220ENST00000598108 FAM182BQ5T319 152 aa31.5■■■□□ 2.63
IRF3-220ENST00000598108 IP6K1Q92551 441 aa31.5■■■□□ 2.63
IRF3-220ENST00000598108 BRWD3Q6RI45 1802 aa31.49■■■□□ 2.63
IRF3-220ENST00000598108 THSD7AQ9UPZ6 1657 aa31.48■■■□□ 2.63
IRF3-220ENST00000598108 RRS1Q15050 365 aaKnown RBP31.48■■■□□ 2.63
IRF3-220ENST00000598108 CARD10Q9BWT7 1032 aa31.48■■■□□ 2.63
IRF3-220ENST00000598108 ERBB3P21860 1342 aa31.47■■■□□ 2.63
IRF3-220ENST00000598108 CGNL1Q0VF96 1302 aa31.47■■■□□ 2.63
IRF3-220ENST00000598108 ABCC6O95255 1503 aa31.46■■■□□ 2.63
IRF3-220ENST00000598108 ANKRD24Q8TF21 1146 aa31.46■■■□□ 2.63
IRF3-220ENST00000598108 HOXC9P31274 260 aa31.44■■■□□ 2.62
IRF3-220ENST00000598108 AMPHP49418 695 aa31.44■■■□□ 2.62
IRF3-220ENST00000598108 RGPD5Q99666 1765 aa31.43■■■□□ 2.62
IRF3-220ENST00000598108 LTV1Q96GA3 475 aaPredicted RBP31.42■■■□□ 2.62
IRF3-220ENST00000598108 NLRP2Q9NX02 1062 aa31.42■■■□□ 2.62
IRF3-220ENST00000598108 CCDC125Q86Z20 511 aa31.4■■■□□ 2.62
IRF3-220ENST00000598108 BLMP54132 1417 aaPredicted RBP31.4■■■□□ 2.62
IRF3-220ENST00000598108 LTN1O94822 1766 aa31.39■■■□□ 2.62
IRF3-220ENST00000598108 PDE3BQ13370 1112 aa31.39■■■□□ 2.62
IRF3-220ENST00000598108 WASHC2AQ641Q2 1341 aa31.37■■■□□ 2.61
IRF3-220ENST00000598108 CCDC7Q96M83 1385 aa31.36■■■□□ 2.61
IRF3-220ENST00000598108 EMILIN1Q9Y6C2 1016 aa31.35■■■□□ 2.61
IRF3-220ENST00000598108 KIF20BQ96Q89 1820 aa31.35■■■□□ 2.61
IRF3-220ENST00000598108 CDCA7Q9BWT1 371 aaPredicted RBP31.34■■■□□ 2.61
IRF3-220ENST00000598108 DISP2A7MBM2 1401 aa31.33■■■□□ 2.61
IRF3-220ENST00000598108 DDB1Q16531 1140 aa31.33■■■□□ 2.61
IRF3-220ENST00000598108 HSP90AB2PQ58FF8 381 aa31.33■■■□□ 2.61
IRF3-220ENST00000598108 RTL1A6NKG5 1358 aa31.32■■■□□ 2.6
IRF3-220ENST00000598108 TNNT2P45379 298 aaPredicted RBP31.32■■■□□ 2.6
IRF3-220ENST00000598108 FAM196AQ6ZSG2 479 aa31.32■■■□□ 2.6
IRF3-220ENST00000598108 KNSTRNQ9Y448 316 aa31.32■■■□□ 2.6
IRF3-220ENST00000598108 DEFB132Q7Z7B7 95 aa31.3■■■□□ 2.6
IRF3-220ENST00000598108 POLKQ9UBT6 870 aa31.29■■■□□ 2.6
IRF3-220ENST00000598108 PPM1GO15355 546 aaPredicted RBP31.28■■■□□ 2.6
IRF3-220ENST00000598108 PER1O15534 1290 aaPredicted RBP31.28■■■□□ 2.6
IRF3-220ENST00000598108 AMER1Q5JTC6 1135 aaPredicted RBP31.28■■■□□ 2.6
IRF3-220ENST00000598108 MARCH10Q8NA82 808 aaPredicted RBP31.27■■■□□ 2.6
IRF3-220ENST00000598108 INSRP06213 1382 aa31.27■■■□□ 2.6
IRF3-220ENST00000598108 FLT4P35916 1363 aa31.27■■■□□ 2.6
IRF3-220ENST00000598108 EXOC5O00471 708 aa31.26■■■□□ 2.59
IRF3-220ENST00000598108 TRIM37O94972 964 aa31.26■■■□□ 2.59
IRF3-220ENST00000598108 IL2RBP14784 551 aa31.26■■■□□ 2.59
IRF3-220ENST00000598108 SF3B2Q13435 895 aaKnown RBP31.26■■■□□ 2.59
IRF3-220ENST00000598108 NBPF6Q5VWK0 638 aa31.26■■■□□ 2.59
IRF3-220ENST00000598108 NBPF4Q96M43 638 aa31.26■■■□□ 2.59
IRF3-220ENST00000598108 KIF24Q5T7B8 1368 aa31.26■■■□□ 2.59
IRF3-220ENST00000598108 PARP4Q9UKK3 1724 aaKnown RBP31.26■■■□□ 2.59
IRF3-220ENST00000598108 PEAK1Q9H792 1746 aa31.24■■■□□ 2.59
IRF3-220ENST00000598108 NSD2O96028 1365 aa31.24■■■□□ 2.59
IRF3-220ENST00000598108 MORC1Q86VD1 984 aa31.23■■■□□ 2.59
IRF3-220ENST00000598108 LRRC37A3O60309 1634 aa31.21■■■□□ 2.59
IRF3-220ENST00000598108 USHBP1Q8N6Y0 703 aa31.21■■■□□ 2.59
IRF3-220ENST00000598108 OVOS2A0A0G2JMS6 1433 aa31.16■■■□□ 2.58
IRF3-220ENST00000598108 SMG6Q86US8 1419 aaKnown RBP31.16■■■□□ 2.58
IRF3-220ENST00000598108 BAG6P46379 1132 aa31.16■■■□□ 2.58
IRF3-220ENST00000598108 TNS2Q63HR2 1409 aa31.15■■■□□ 2.58
IRF3-220ENST00000598108 WNK3Q9BYP7 1800 aa31.15■■■□□ 2.58
IRF3-220ENST00000598108 EN1Q05925 392 aaPredicted RBP31.15■■■□□ 2.58
IRF3-220ENST00000598108 CC2D1BQ5T0F9 858 aaKnown RBP31.14■■■□□ 2.58
IRF3-220ENST00000598108 PTF1AQ7RTS3 328 aa31.14■■■□□ 2.58
IRF3-220ENST00000598108 APBA3O96018 575 aa31.13■■■□□ 2.57
IRF3-220ENST00000598108 ANKRD26Q9UPS8 1709 aa31.12■■■□□ 2.57
IRF3-220ENST00000598108 MEGF6O75095 1541 aa31.1■■■□□ 2.57
IRF3-220ENST00000598108 BCL9O00512 1426 aa31.1■■■□□ 2.57
IRF3-220ENST00000598108 EIF4A2Q14240 407 aaKnown RBP31.1■■■□□ 2.57
IRF3-220ENST00000598108 EYA1Q99502 592 aa31.1■■■□□ 2.57
IRF3-220ENST00000598108 FAM208AQ9UK61 1670 aaKnown RBP31.09■■■□□ 2.57
IRF3-220ENST00000598108 DDX54Q8TDD1 881 aaKnown RBP31.09■■■□□ 2.57
IRF3-220ENST00000598108 RGPD2P0DJD1 1756 aa31.09■■■□□ 2.57
IRF3-220ENST00000598108 MAP2P11137 1827 aaKnown RBP31.08■■■□□ 2.57
IRF3-220ENST00000598108 CNGB1Q14028 1251 aaPredicted RBP31.08■■■□□ 2.57
IRF3-220ENST00000598108 CAMKK2Q96RR4 588 aa31.08■■■□□ 2.57
IRF3-220ENST00000598108 EZH2Q15910 746 aaKnown RBP31.07■■■□□ 2.56
IRF3-220ENST00000598108 ZCRB1Q8TBF4 217 aaKnown RBP31.07■■■□□ 2.56
IRF3-220ENST00000598108 RAPGEF4Q8WZA2 1011 aa31.07■■■□□ 2.56
IRF3-220ENST00000598108 BCL11BQ9C0K0 894 aaPredicted RBP31.06■■■□□ 2.56
IRF3-220ENST00000598108 RGPD1P0DJD0 1748 aa31.05■■■□□ 2.56
IRF3-220ENST00000598108 KCNQ2O43526 872 aa31.05■■■□□ 2.56
IRF3-220ENST00000598108 NPC1L1Q9UHC9 1359 aa31.05■■■□□ 2.56
IRF3-220ENST00000598108 TATP17735 454 aaPredicted RBP31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms