RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 USP47Q96K76 1375 aa21.88■■□□□ 1.09
PPFIA4-208ENST00000597023 USP31Q70CQ4 1352 aa21.87■■□□□ 1.09
PPFIA4-208ENST00000597023 MON2Q7Z3U7 1717 aa21.86■■□□□ 1.09
PPFIA4-208ENST00000597023 WDR17Q8IZU2 1322 aa21.86■■□□□ 1.09
PPFIA4-208ENST00000597023 COL18A1P39060 1754 aa21.86■■□□□ 1.09
PPFIA4-208ENST00000597023 TMF1P82094 1093 aa21.85■■□□□ 1.09
PPFIA4-208ENST00000597023 EDC4Q6P2E9 1401 aaKnown RBP21.85■■□□□ 1.09
PPFIA4-208ENST00000597023 NFAT5O94916 1531 aa21.85■■□□□ 1.09
PPFIA4-208ENST00000597023 EZH2Q15910 746 aaKnown RBP21.83■■□□□ 1.09
PPFIA4-208ENST00000597023 SLC24A1O60721 1099 aa21.82■■□□□ 1.08
PPFIA4-208ENST00000597023 APBA3O96018 575 aa21.82■■□□□ 1.08
PPFIA4-208ENST00000597023 TIMELESSQ9UNS1 1208 aa21.82■■□□□ 1.08
PPFIA4-208ENST00000597023 PSDA5PKW4 1024 aaPredicted RBP21.81■■□□□ 1.08
PPFIA4-208ENST00000597023 DDB1Q16531 1140 aa21.81■■□□□ 1.08
PPFIA4-208ENST00000597023 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
PPFIA4-208ENST00000597023 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
PPFIA4-208ENST00000597023 FBLN1P23142 703 aa21.8■■□□□ 1.08
PPFIA4-208ENST00000597023 CARD10Q9BWT7 1032 aa21.8■■□□□ 1.08
PPFIA4-208ENST00000597023 NINLQ9Y2I6 1382 aa21.78■■□□□ 1.08
PPFIA4-208ENST00000597023 CAMKK2Q96RR4 588 aa21.78■■□□□ 1.08
PPFIA4-208ENST00000597023 NLRP2Q9NX02 1062 aa21.78■■□□□ 1.08
PPFIA4-208ENST00000597023 RGPD5Q99666 1765 aa21.78■■□□□ 1.08
PPFIA4-208ENST00000597023 COG3Q96JB2 828 aa21.77■■□□□ 1.08
PPFIA4-208ENST00000597023 OVOS2A0A0J9YW53 1432 aa21.77■■□□□ 1.08
PPFIA4-208ENST00000597023 OVOS2Q6IE36 1432 aa21.77■■□□□ 1.08
PPFIA4-208ENST00000597023 RGPD1P0DJD0 1748 aa21.77■■□□□ 1.08
PPFIA4-208ENST00000597023 ANKRD24Q8TF21 1146 aa21.76■■□□□ 1.07
PPFIA4-208ENST00000597023 ANKRD36BQ8N2N9 1353 aa21.75■■□□□ 1.07
PPFIA4-208ENST00000597023 MARCH10Q8NA82 808 aaPredicted RBP21.75■■□□□ 1.07
PPFIA4-208ENST00000597023 LTV1Q96GA3 475 aaPredicted RBP21.75■■□□□ 1.07
PPFIA4-208ENST00000597023 ERBB3P21860 1342 aa21.75■■□□□ 1.07
PPFIA4-208ENST00000597023 PARP4Q9UKK3 1724 aaKnown RBP21.75■■□□□ 1.07
PPFIA4-208ENST00000597023 DISP2A7MBM2 1401 aa21.74■■□□□ 1.07
PPFIA4-208ENST00000597023 CDCA7Q9BWT1 371 aaPredicted RBP21.74■■□□□ 1.07
PPFIA4-208ENST00000597023 GGNBP2Q9H3C7 697 aa21.74■■□□□ 1.07
PPFIA4-208ENST00000597023 TNS1Q9HBL0 1735 aaKnown RBP21.74■■□□□ 1.07
PPFIA4-208ENST00000597023 R3HDM1Q15032 1099 aaKnown RBP21.73■■□□□ 1.07
PPFIA4-208ENST00000597023 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
PPFIA4-208ENST00000597023 EXOC5O00471 708 aa21.72■■□□□ 1.07
PPFIA4-208ENST00000597023 FYB1O15117 783 aa21.72■■□□□ 1.07
PPFIA4-208ENST00000597023 CDCA8Q53HL2 280 aa21.72■■□□□ 1.07
PPFIA4-208ENST00000597023 IP6K1Q92551 441 aa21.72■■□□□ 1.07
PPFIA4-208ENST00000597023 USP54Q70EL1 1684 aa21.72■■□□□ 1.07
PPFIA4-208ENST00000597023 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
PPFIA4-208ENST00000597023 OVOS2A0A0G2JMS6 1433 aa21.72■■□□□ 1.07
PPFIA4-208ENST00000597023 LRRC37A3O60309 1634 aa21.71■■□□□ 1.07
PPFIA4-208ENST00000597023 POLR3GLQ9BT43 218 aa21.71■■□□□ 1.07
PPFIA4-208ENST00000597023 SRCAPQ6ZRS2 3230 aa21.71■■□□□ 1.07
PPFIA4-208ENST00000597023 MAP3K19Q56UN5 1328 aa21.7■■□□□ 1.06
PPFIA4-208ENST00000597023 AMPHP49418 695 aa21.69■■□□□ 1.06
PPFIA4-208ENST00000597023 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
PPFIA4-208ENST00000597023 ABCC6O95255 1503 aa21.69■■□□□ 1.06
PPFIA4-208ENST00000597023 CARD14Q9BXL6 1004 aa21.68■■□□□ 1.06
PPFIA4-208ENST00000597023 LTN1O94822 1766 aa21.68■■□□□ 1.06
PPFIA4-208ENST00000597023 C11orf95C9JLR9 678 aaPredicted RBP21.67■■□□□ 1.06
PPFIA4-208ENST00000597023 IL2RBP14784 551 aa21.67■■□□□ 1.06
PPFIA4-208ENST00000597023 HOXC9P31274 260 aa21.67■■□□□ 1.06
PPFIA4-208ENST00000597023 PEAK1Q9H792 1746 aa21.66■■□□□ 1.06
PPFIA4-208ENST00000597023 HSPA5P11021 654 aaKnown RBP21.65■■□□□ 1.06
PPFIA4-208ENST00000597023 BCL11BQ9C0K0 894 aaPredicted RBP21.65■■□□□ 1.06
PPFIA4-208ENST00000597023 ACSBG1Q96GR2 724 aa21.64■■□□□ 1.05
PPFIA4-208ENST00000597023 WNK3Q9BYP7 1800 aa21.64■■□□□ 1.05
PPFIA4-208ENST00000597023 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
PPFIA4-208ENST00000597023 KCNQ2O43526 872 aa21.63■■□□□ 1.05
PPFIA4-208ENST00000597023 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
PPFIA4-208ENST00000597023 TNS2Q63HR2 1409 aa21.62■■□□□ 1.05
PPFIA4-208ENST00000597023 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
PPFIA4-208ENST00000597023 PLSCR1O15162 318 aa21.6■■□□□ 1.05
PPFIA4-208ENST00000597023 NBPF14Q5TI25 921 aa21.6■■□□□ 1.05
PPFIA4-208ENST00000597023 USHBP1Q8N6Y0 703 aa21.59■■□□□ 1.05
PPFIA4-208ENST00000597023 DDX54Q8TDD1 881 aaKnown RBP21.59■■□□□ 1.05
PPFIA4-208ENST00000597023 BCL9O00512 1426 aa21.58■■□□□ 1.05
PPFIA4-208ENST00000597023 PROM2Q8N271 834 aa21.58■■□□□ 1.05
PPFIA4-208ENST00000597023 HSP90AB2PQ58FF8 381 aa21.57■■□□□ 1.04
PPFIA4-208ENST00000597023 NBPF6Q5VWK0 638 aa21.57■■□□□ 1.04
PPFIA4-208ENST00000597023 NBPF4Q96M43 638 aa21.57■■□□□ 1.04
PPFIA4-208ENST00000597023 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
PPFIA4-208ENST00000597023 MYOM1P52179 1685 aa21.56■■□□□ 1.04
PPFIA4-208ENST00000597023 EMILIN1Q9Y6C2 1016 aa21.55■■□□□ 1.04
PPFIA4-208ENST00000597023 RREB1Q92766 1687 aa21.55■■□□□ 1.04
PPFIA4-208ENST00000597023 NUP188Q5SRE5 1749 aa21.55■■□□□ 1.04
PPFIA4-208ENST00000597023 RTL1A6NKG5 1358 aa21.54■■□□□ 1.04
PPFIA4-208ENST00000597023 PPM1GO15355 546 aaPredicted RBP21.54■■□□□ 1.04
PPFIA4-208ENST00000597023 ANO8Q9HCE9 1232 aaPredicted RBP21.54■■□□□ 1.04
PPFIA4-208ENST00000597023 TXNRD1Q16881 649 aa21.53■■□□□ 1.04
PPFIA4-208ENST00000597023 CGNL1Q0VF96 1302 aa21.52■■□□□ 1.03
PPFIA4-208ENST00000597023 TNNT2P45379 298 aaPredicted RBP21.51■■□□□ 1.03
PPFIA4-208ENST00000597023 PANK3Q9H999 370 aa21.51■■□□□ 1.03
PPFIA4-208ENST00000597023 KIF20BQ96Q89 1820 aa21.5■■□□□ 1.03
PPFIA4-208ENST00000597023 ZCRB1Q8TBF4 217 aaKnown RBP21.5■■□□□ 1.03
PPFIA4-208ENST00000597023 MEGF6O75095 1541 aa21.5■■□□□ 1.03
PPFIA4-208ENST00000597023 INSRP06213 1382 aa21.49■■□□□ 1.03
PPFIA4-208ENST00000597023 FLT4P35916 1363 aa21.49■■□□□ 1.03
PPFIA4-208ENST00000597023 RGPD2P0DJD1 1756 aa21.49■■□□□ 1.03
PPFIA4-208ENST00000597023 LRP5O75197 1615 aa21.49■■□□□ 1.03
PPFIA4-208ENST00000597023 SMG6Q86US8 1419 aaKnown RBP21.48■■□□□ 1.03
PPFIA4-208ENST00000597023 SYTL4Q96C24 671 aaPredicted RBP21.48■■□□□ 1.03
PPFIA4-208ENST00000597023 RAPGEF4Q8WZA2 1011 aa21.47■■□□□ 1.03
PPFIA4-208ENST00000597023 PDGFDQ9GZP0 370 aaPredicted RBP21.47■■□□□ 1.03
PPFIA4-208ENST00000597023 FAM208AQ9UK61 1670 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms