RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ONECUT3O60422 494 aaPredicted RBP30.32■■■□□ 2.44
HOMER3-206ENST00000594439 AXIN2Q9Y2T1 843 aa30.32■■■□□ 2.44
HOMER3-206ENST00000594439 ABCC6O95255 1503 aa30.32■■■□□ 2.44
HOMER3-206ENST00000594439 GGNBP2Q9H3C7 697 aa30.31■■■□□ 2.44
HOMER3-206ENST00000594439 SPATA31A1Q5TZJ5 1347 aa30.3■■■□□ 2.44
HOMER3-206ENST00000594439 LARP1Q6PKG0 1096 aaKnown RBP30.3■■■□□ 2.44
HOMER3-206ENST00000594439 BRWD3Q6RI45 1802 aa30.29■■■□□ 2.44
HOMER3-206ENST00000594439 PANK3Q9H999 370 aa30.28■■■□□ 2.44
HOMER3-206ENST00000594439 SEPT12Q8IYM1 358 aa30.27■■■□□ 2.44
HOMER3-206ENST00000594439 FAM98CQ17RN3 349 aaKnown RBP30.26■■■□□ 2.43
HOMER3-206ENST00000594439 THSD7AQ9UPZ6 1657 aa30.25■■■□□ 2.43
HOMER3-206ENST00000594439 CRB1P82279 1406 aa30.23■■■□□ 2.43
HOMER3-206ENST00000594439 FBLN1P23142 703 aa30.23■■■□□ 2.43
HOMER3-206ENST00000594439 CGNL1Q0VF96 1302 aa30.22■■■□□ 2.43
HOMER3-206ENST00000594439 CCDC7Q96M83 1385 aa30.22■■■□□ 2.43
HOMER3-206ENST00000594439 WDR17Q8IZU2 1322 aa30.22■■■□□ 2.43
HOMER3-206ENST00000594439 USP35Q9P2H5 1018 aa30.21■■■□□ 2.43
HOMER3-206ENST00000594439 MAP3K19Q56UN5 1328 aa30.2■■■□□ 2.42
HOMER3-206ENST00000594439 WASHC2AQ641Q2 1341 aa30.2■■■□□ 2.42
HOMER3-206ENST00000594439 ANKRD26Q9UPS8 1709 aa30.19■■■□□ 2.42
HOMER3-206ENST00000594439 TCP11L2Q8N4U5 519 aa30.19■■■□□ 2.42
HOMER3-206ENST00000594439 BARGINQ6ZT62 677 aa30.18■■■□□ 2.42
HOMER3-206ENST00000594439 A0A0G2JS52 829 aa30.17■■■□□ 2.42
HOMER3-206ENST00000594439 MYT1Q01538 1121 aa30.17■■■□□ 2.42
HOMER3-206ENST00000594439 TOM1L2Q6ZVM7 507 aa30.17■■■□□ 2.42
HOMER3-206ENST00000594439 IP6K1Q92551 441 aa30.17■■■□□ 2.42
HOMER3-206ENST00000594439 BLMP54132 1417 aaPredicted RBP30.16■■■□□ 2.42
HOMER3-206ENST00000594439 UPF1Q92900 1129 aaKnown RBP eCLIP30.16■■■□□ 2.42
HOMER3-206ENST00000594439 THRAP3Q9Y2W1 955 aaKnown RBP30.16■■■□□ 2.42
HOMER3-206ENST00000594439 ERBB3P21860 1342 aa30.15■■■□□ 2.42
HOMER3-206ENST00000594439 CSB-PGBD3P0DP91 1061 aa30.14■■■□□ 2.42
HOMER3-206ENST00000594439 RRS1Q15050 365 aaKnown RBP30.14■■■□□ 2.42
HOMER3-206ENST00000594439 WNK3Q9BYP7 1800 aa30.13■■■□□ 2.41
HOMER3-206ENST00000594439 HOXC9P31274 260 aa30.12■■■□□ 2.41
HOMER3-206ENST00000594439 AMPHP49418 695 aa30.12■■■□□ 2.41
HOMER3-206ENST00000594439 KRT27Q7Z3Y8 459 aa30.12■■■□□ 2.41
HOMER3-206ENST00000594439 ANKRD24Q8TF21 1146 aa30.12■■■□□ 2.41
HOMER3-206ENST00000594439 CARD10Q9BWT7 1032 aa30.12■■■□□ 2.41
HOMER3-206ENST00000594439 RTL1A6NKG5 1358 aa30.12■■■□□ 2.41
HOMER3-206ENST00000594439 PEAK1Q9H792 1746 aa30.11■■■□□ 2.41
HOMER3-206ENST00000594439 PARP4Q9UKK3 1724 aaKnown RBP30.1■■■□□ 2.41
HOMER3-206ENST00000594439 NSD2O96028 1365 aa30.1■■■□□ 2.41
HOMER3-206ENST00000594439 KNSTRNQ9Y448 316 aa30.09■■■□□ 2.41
HOMER3-206ENST00000594439 MAP2P11137 1827 aaKnown RBP30.08■■■□□ 2.41
HOMER3-206ENST00000594439 FAM208AQ9UK61 1670 aaKnown RBP30.07■■■□□ 2.41
HOMER3-206ENST00000594439 KIF24Q5T7B8 1368 aa30.06■■■□□ 2.4
HOMER3-206ENST00000594439 PER1O15534 1290 aaPredicted RBP30.06■■■□□ 2.4
HOMER3-206ENST00000594439 LTV1Q96GA3 475 aaPredicted RBP30.05■■■□□ 2.4
HOMER3-206ENST00000594439 NLRP2Q9NX02 1062 aa30.05■■■□□ 2.4
HOMER3-206ENST00000594439 DISP2A7MBM2 1401 aa30.05■■■□□ 2.4
HOMER3-206ENST00000594439 AMER1Q5JTC6 1135 aaPredicted RBP30.04■■■□□ 2.4
HOMER3-206ENST00000594439 EMILIN1Q9Y6C2 1016 aa30.04■■■□□ 2.4
HOMER3-206ENST00000594439 LRRC37A3O60309 1634 aa30.04■■■□□ 2.4
HOMER3-206ENST00000594439 FLT4P35916 1363 aa30.03■■■□□ 2.4
HOMER3-206ENST00000594439 RGPD2P0DJD1 1756 aa30.03■■■□□ 2.4
HOMER3-206ENST00000594439 INSRP06213 1382 aa30.02■■■□□ 2.4
HOMER3-206ENST00000594439 ZEB1P37275 1124 aaPredicted RBP30■■■□□ 2.39
HOMER3-206ENST00000594439 TNNT2P45379 298 aaPredicted RBP30■■■□□ 2.39
HOMER3-206ENST00000594439 HSP90AB2PQ58FF8 381 aa30■■■□□ 2.39
HOMER3-206ENST00000594439 FAM182BQ5T319 152 aa30■■■□□ 2.39
HOMER3-206ENST00000594439 CDCA7Q9BWT1 371 aaPredicted RBP30■■■□□ 2.39
HOMER3-206ENST00000594439 POLKQ9UBT6 870 aa30■■■□□ 2.39
HOMER3-206ENST00000594439 PDE3BQ13370 1112 aa29.98■■■□□ 2.39
HOMER3-206ENST00000594439 MORC1Q86VD1 984 aa29.98■■■□□ 2.39
HOMER3-206ENST00000594439 EP400Q96L91 3159 aa29.96■■■□□ 2.39
HOMER3-206ENST00000594439 PPM1GO15355 546 aaPredicted RBP29.95■■■□□ 2.39
HOMER3-206ENST00000594439 DDB1Q16531 1140 aa29.95■■■□□ 2.39
HOMER3-206ENST00000594439 SMG6Q86US8 1419 aaKnown RBP29.95■■■□□ 2.38
HOMER3-206ENST00000594439 CCDC125Q86Z20 511 aa29.94■■■□□ 2.38
HOMER3-206ENST00000594439 NPC1L1Q9UHC9 1359 aa29.92■■■□□ 2.38
HOMER3-206ENST00000594439 IL2RBP14784 551 aa29.92■■■□□ 2.38
HOMER3-206ENST00000594439 NBPF6Q5VWK0 638 aa29.92■■■□□ 2.38
HOMER3-206ENST00000594439 NBPF4Q96M43 638 aa29.92■■■□□ 2.38
HOMER3-206ENST00000594439 FAM196AQ6ZSG2 479 aa29.91■■■□□ 2.38
HOMER3-206ENST00000594439 TNS2Q63HR2 1409 aa29.89■■■□□ 2.38
HOMER3-206ENST00000594439 CC2D1BQ5T0F9 858 aaKnown RBP29.89■■■□□ 2.38
HOMER3-206ENST00000594439 RGPD1P0DJD0 1748 aa29.88■■■□□ 2.37
HOMER3-206ENST00000594439 EXOC5O00471 708 aa29.88■■■□□ 2.37
HOMER3-206ENST00000594439 MARCH10Q8NA82 808 aaPredicted RBP29.87■■■□□ 2.37
HOMER3-206ENST00000594439 USHBP1Q8N6Y0 703 aa29.86■■■□□ 2.37
HOMER3-206ENST00000594439 OVOS2A0A0G2JMS6 1433 aa29.86■■■□□ 2.37
HOMER3-206ENST00000594439 TNS1Q9HBL0 1735 aaKnown RBP29.85■■■□□ 2.37
HOMER3-206ENST00000594439 MEGF6O75095 1541 aa29.83■■■□□ 2.37
HOMER3-206ENST00000594439 NCAPD2Q15021 1401 aa29.83■■■□□ 2.37
HOMER3-206ENST00000594439 SBF2Q86WG5 1849 aa29.82■■■□□ 2.36
HOMER3-206ENST00000594439 EIF4A2Q14240 407 aaKnown RBP29.82■■■□□ 2.36
HOMER3-206ENST00000594439 SF3B2Q13435 895 aaKnown RBP29.81■■■□□ 2.36
HOMER3-206ENST00000594439 BCL9O00512 1426 aa29.8■■■□□ 2.36
HOMER3-206ENST00000594439 TRIM37O94972 964 aa29.8■■■□□ 2.36
HOMER3-206ENST00000594439 CNGB1Q14028 1251 aaPredicted RBP29.79■■■□□ 2.36
HOMER3-206ENST00000594439 EYA1Q99502 592 aa29.79■■■□□ 2.36
HOMER3-206ENST00000594439 SHANK3Q9BYB0 1731 aa29.79■■■□□ 2.36
HOMER3-206ENST00000594439 DEFB132Q7Z7B7 95 aa29.78■■■□□ 2.36
HOMER3-206ENST00000594439 RAPGEF4Q8WZA2 1011 aa29.76■■■□□ 2.35
HOMER3-206ENST00000594439 MTHFSP49914 203 aa29.75■■■□□ 2.35
HOMER3-206ENST00000594439 TATP17735 454 aaPredicted RBP29.74■■■□□ 2.35
HOMER3-206ENST00000594439 ZCRB1Q8TBF4 217 aaKnown RBP29.74■■■□□ 2.35
HOMER3-206ENST00000594439 BAG6P46379 1132 aa29.73■■■□□ 2.35
HOMER3-206ENST00000594439 IGSF1Q8N6C5 1336 aa29.71■■■□□ 2.35
HOMER3-206ENST00000594439 DDX54Q8TDD1 881 aaKnown RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms