RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 USP35Q9P2H5 1018 aa26.65■■□□□ 1.86
LTBP4-208ENST00000593738 CRB1P82279 1406 aa26.65■■□□□ 1.86
LTBP4-208ENST00000593738 SOX12O15370 315 aa26.64■■□□□ 1.86
LTBP4-208ENST00000593738 ABCC6O95255 1503 aa26.64■■□□□ 1.85
LTBP4-208ENST00000593738 EP400Q96L91 3159 aa26.63■■□□□ 1.85
LTBP4-208ENST00000593738 AXIN2Q9Y2T1 843 aa26.62■■□□□ 1.85
LTBP4-208ENST00000593738 WDR17Q8IZU2 1322 aa26.61■■□□□ 1.85
LTBP4-208ENST00000593738 RGPD5Q99666 1765 aa26.61■■□□□ 1.85
LTBP4-208ENST00000593738 OVOS2A0A0J9YW53 1432 aa26.6■■□□□ 1.85
LTBP4-208ENST00000593738 OVOS2Q6IE36 1432 aa26.6■■□□□ 1.85
LTBP4-208ENST00000593738 SF3B2Q13435 895 aaKnown RBP26.6■■□□□ 1.85
LTBP4-208ENST00000593738 EIF4G2P78344 907 aaKnown RBP eCLIP26.59■■□□□ 1.851e-6■■■■□ 19.5
LTBP4-208ENST00000593738 TOM1L2Q6ZVM7 507 aa26.59■■□□□ 1.85
LTBP4-208ENST00000593738 LTN1O94822 1766 aa26.57■■□□□ 1.84
LTBP4-208ENST00000593738 COG3Q96JB2 828 aa26.57■■□□□ 1.84
LTBP4-208ENST00000593738 PDE3BQ13370 1112 aa26.56■■□□□ 1.84
LTBP4-208ENST00000593738 PARP4Q9UKK3 1724 aaKnown RBP26.55■■□□□ 1.84
LTBP4-208ENST00000593738 CSB-PGBD3P0DP91 1061 aa26.54■■□□□ 1.84
LTBP4-208ENST00000593738 FAM196AQ6ZSG2 479 aa26.54■■□□□ 1.84
LTBP4-208ENST00000593738 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
LTBP4-208ENST00000593738 CARD10Q9BWT7 1032 aa26.53■■□□□ 1.84
LTBP4-208ENST00000593738 MYOM1P52179 1685 aa26.52■■□□□ 1.84
LTBP4-208ENST00000593738 FAM182BQ5T319 152 aa26.52■■□□□ 1.84
LTBP4-208ENST00000593738 RGPD1P0DJD0 1748 aa26.51■■□□□ 1.83
LTBP4-208ENST00000593738 HSPA5P11021 654 aaKnown RBP26.51■■□□□ 1.83
LTBP4-208ENST00000593738 C11orf95C9JLR9 678 aaPredicted RBP26.5■■□□□ 1.83
LTBP4-208ENST00000593738 FYB1O15117 783 aa26.5■■□□□ 1.83
LTBP4-208ENST00000593738 BAG6P46379 1132 aa26.49■■□□□ 1.83
LTBP4-208ENST00000593738 WNK3Q9BYP7 1800 aa26.49■■□□□ 1.83
LTBP4-208ENST00000593738 CCDC7Q96M83 1385 aa26.48■■□□□ 1.83
LTBP4-208ENST00000593738 ERBB3P21860 1342 aa26.47■■□□□ 1.83
LTBP4-208ENST00000593738 DEFB132Q7Z7B7 95 aa26.47■■□□□ 1.83
LTBP4-208ENST00000593738 IP6K1Q92551 441 aa26.47■■□□□ 1.83
LTBP4-208ENST00000593738 KIF20BQ96Q89 1820 aa26.46■■□□□ 1.83
LTBP4-208ENST00000593738 DDB1Q16531 1140 aa26.46■■□□□ 1.83
LTBP4-208ENST00000593738 CARD14Q9BXL6 1004 aa26.45■■□□□ 1.82
LTBP4-208ENST00000593738 GGNBP2Q9H3C7 697 aa26.45■■□□□ 1.82
LTBP4-208ENST00000593738 ANKRD24Q8TF21 1146 aa26.44■■□□□ 1.82
LTBP4-208ENST00000593738 LRRC37A3O60309 1634 aa26.43■■□□□ 1.82
LTBP4-208ENST00000593738 TNS1Q9HBL0 1735 aaKnown RBP26.42■■□□□ 1.82
LTBP4-208ENST00000593738 NLRP2Q9NX02 1062 aa26.42■■□□□ 1.82
LTBP4-208ENST00000593738 MAP3K19Q56UN5 1328 aa26.41■■□□□ 1.82
LTBP4-208ENST00000593738 DISP2A7MBM2 1401 aa26.41■■□□□ 1.82
LTBP4-208ENST00000593738 NSD3Q9BZ95 1437 aa26.41■■□□□ 1.82
LTBP4-208ENST00000593738 TRIM37O94972 964 aa26.41■■□□□ 1.82
LTBP4-208ENST00000593738 POLR3GLQ9BT43 218 aa26.41■■□□□ 1.82
LTBP4-208ENST00000593738 AMPHP49418 695 aa26.4■■□□□ 1.82
LTBP4-208ENST00000593738 FAM208AQ9UK61 1670 aaKnown RBP26.4■■□□□ 1.82
LTBP4-208ENST00000593738 OVOS2A0A0G2JMS6 1433 aa26.39■■□□□ 1.82
LTBP4-208ENST00000593738 EXOC5O00471 708 aa26.39■■□□□ 1.82
LTBP4-208ENST00000593738 HOXC9P31274 260 aa26.39■■□□□ 1.82
LTBP4-208ENST00000593738 RTL1A6NKG5 1358 aa26.38■■□□□ 1.81
LTBP4-208ENST00000593738 PEAK1Q9H792 1746 aa26.37■■□□□ 1.81
LTBP4-208ENST00000593738 FBLN1P23142 703 aa26.37■■□□□ 1.81
LTBP4-208ENST00000593738 CGNL1Q0VF96 1302 aa26.37■■□□□ 1.81
LTBP4-208ENST00000593738 EN1Q05925 392 aaPredicted RBP26.36■■□□□ 1.81
LTBP4-208ENST00000593738 KIF24Q5T7B8 1368 aa26.34■■□□□ 1.81
LTBP4-208ENST00000593738 BCL9O00512 1426 aa26.34■■□□□ 1.81
LTBP4-208ENST00000593738 APBA3O96018 575 aa26.34■■□□□ 1.81
LTBP4-208ENST00000593738 IL2RBP14784 551 aa26.34■■□□□ 1.81
LTBP4-208ENST00000593738 RRS1Q15050 365 aaKnown RBP26.34■■□□□ 1.81
LTBP4-208ENST00000593738 MARCH10Q8NA82 808 aaPredicted RBP26.33■■□□□ 1.81
LTBP4-208ENST00000593738 LTV1Q96GA3 475 aaPredicted RBP26.33■■□□□ 1.81
LTBP4-208ENST00000593738 PARD3Q8TEW0 1356 aa26.33■■□□□ 1.8
LTBP4-208ENST00000593738 SBF2Q86WG5 1849 aa26.32■■□□□ 1.8
LTBP4-208ENST00000593738 TNS2Q63HR2 1409 aa26.31■■□□□ 1.8
LTBP4-208ENST00000593738 CAMKK2Q96RR4 588 aa26.3■■□□□ 1.8
LTBP4-208ENST00000593738 PANK3Q9H999 370 aa26.3■■□□□ 1.8
LTBP4-208ENST00000593738 EZH2Q15910 746 aaKnown RBP26.28■■□□□ 1.8
LTBP4-208ENST00000593738 INSRP06213 1382 aa26.28■■□□□ 1.8
LTBP4-208ENST00000593738 FLT4P35916 1363 aa26.28■■□□□ 1.8
LTBP4-208ENST00000593738 BCL11BQ9C0K0 894 aaPredicted RBP26.27■■□□□ 1.8
LTBP4-208ENST00000593738 SMG6Q86US8 1419 aaKnown RBP26.27■■□□□ 1.8
LTBP4-208ENST00000593738 ANKRD26Q9UPS8 1709 aa26.27■■□□□ 1.8
LTBP4-208ENST00000593738 RGPD2P0DJD1 1756 aa26.25■■□□□ 1.79
LTBP4-208ENST00000593738 MAP2P11137 1827 aaKnown RBP26.24■■□□□ 1.79
LTBP4-208ENST00000593738 HSP90AB2PQ58FF8 381 aa26.23■■□□□ 1.79
LTBP4-208ENST00000593738 NSD2O96028 1365 aa26.22■■□□□ 1.79
LTBP4-208ENST00000593738 PLSCR1O15162 318 aa26.22■■□□□ 1.79
LTBP4-208ENST00000593738 RREB1Q92766 1687 aa26.22■■□□□ 1.79
LTBP4-208ENST00000593738 RGPD3A6NKT7 1758 aaPredicted RBP26.21■■□□□ 1.79
LTBP4-208ENST00000593738 RGPD4Q7Z3J3 1758 aa26.21■■□□□ 1.79
LTBP4-208ENST00000593738 NBPF6Q5VWK0 638 aa26.21■■□□□ 1.79
LTBP4-208ENST00000593738 NBPF4Q96M43 638 aa26.21■■□□□ 1.79
LTBP4-208ENST00000593738 EMILIN1Q9Y6C2 1016 aa26.21■■□□□ 1.79
LTBP4-208ENST00000593738 KIF7Q2M1P5 1343 aa26.2■■□□□ 1.79
LTBP4-208ENST00000593738 WASHC2AQ641Q2 1341 aa26.18■■□□□ 1.78
LTBP4-208ENST00000593738 KNSTRNQ9Y448 316 aa26.18■■□□□ 1.78
LTBP4-208ENST00000593738 PPM1GO15355 546 aaPredicted RBP26.17■■□□□ 1.78
LTBP4-208ENST00000593738 POLKQ9UBT6 870 aa26.17■■□□□ 1.78
LTBP4-208ENST00000593738 ZCRB1Q8TBF4 217 aaKnown RBP26.16■■□□□ 1.78
LTBP4-208ENST00000593738 NUP188Q5SRE5 1749 aa26.16■■□□□ 1.78
LTBP4-208ENST00000593738 NHSQ6T4R5 1651 aa26.15■■□□□ 1.78
LTBP4-208ENST00000593738 NBPF14Q5TI25 921 aa26.15■■□□□ 1.78
LTBP4-208ENST00000593738 RAPGEF4Q8WZA2 1011 aa26.15■■□□□ 1.78
LTBP4-208ENST00000593738 PTF1AQ7RTS3 328 aa26.14■■□□□ 1.78
LTBP4-208ENST00000593738 DDX54Q8TDD1 881 aaKnown RBP26.14■■□□□ 1.78
LTBP4-208ENST00000593738 PSDA5PKW4 1024 aaPredicted RBP26.13■■□□□ 1.77
LTBP4-208ENST00000593738 MEGF6O75095 1541 aa26.13■■□□□ 1.77
LTBP4-208ENST00000593738 TATP17735 454 aaPredicted RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms