RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-219ENST00000592927 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-219ENST00000592927 CASZ1Q86V15 1759 aa16.42■□□□□ 0.22
DDX39A-219ENST00000592927 ZC3H6P61129 1189 aaKnown RBP16.42■□□□□ 0.22
DDX39A-219ENST00000592927 GPR162Q16538 588 aa16.42■□□□□ 0.22
DDX39A-219ENST00000592927 ITSN1Q15811 1721 aa16.42■□□□□ 0.22
DDX39A-219ENST00000592927 LARP1Q6PKG0 1096 aaKnown RBP16.41■□□□□ 0.22
DDX39A-219ENST00000592927 PROM2Q8N271 834 aa16.41■□□□□ 0.22
DDX39A-219ENST00000592927 TCP11L2Q8N4U5 519 aa16.41■□□□□ 0.22
DDX39A-219ENST00000592927 ACEP12821 1306 aa16.41■□□□□ 0.22
DDX39A-219ENST00000592927 C11orf95C9JLR9 678 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-219ENST00000592927 SGIP1Q9BQI5 828 aa16.4■□□□□ 0.22
DDX39A-219ENST00000592927 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
DDX39A-219ENST00000592927 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
DDX39A-219ENST00000592927 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-219ENST00000592927 PTF1AQ7RTS3 328 aa16.39■□□□□ 0.21
DDX39A-219ENST00000592927 MTFR1LQ9H019 292 aa16.39■□□□□ 0.21
DDX39A-219ENST00000592927 CHD4Q14839 1912 aa16.39■□□□□ 0.21
DDX39A-219ENST00000592927 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
DDX39A-219ENST00000592927 ARXQ96QS3 562 aa16.38■□□□□ 0.21
DDX39A-219ENST00000592927 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
DDX39A-219ENST00000592927 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
DDX39A-219ENST00000592927 TRPM3Q9HCF6 1732 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-219ENST00000592927 KIF7Q2M1P5 1343 aa16.38■□□□□ 0.21
DDX39A-219ENST00000592927 CCDC7Q96M83 1385 aa16.38■□□□□ 0.21
DDX39A-219ENST00000592927 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
DDX39A-219ENST00000592927 HDGFL2Q7Z4V5 671 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-219ENST00000592927 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-219ENST00000592927 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
DDX39A-219ENST00000592927 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
DDX39A-219ENST00000592927 THRAP3Q9Y2W1 955 aaKnown RBP16.35■□□□□ 0.21
DDX39A-219ENST00000592927 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
DDX39A-219ENST00000592927 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
DDX39A-219ENST00000592927 OVOS2A0A0G2JMS6 1433 aa16.34■□□□□ 0.21
DDX39A-219ENST00000592927 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
DDX39A-219ENST00000592927 CPSF1Q10570 1443 aaKnown RBP16.34■□□□□ 0.21
DDX39A-219ENST00000592927 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
DDX39A-219ENST00000592927 TXNRD1Q16881 649 aa16.33■□□□□ 0.2
DDX39A-219ENST00000592927 NUTM2GQ5VZR2 741 aa16.33■□□□□ 0.2
DDX39A-219ENST00000592927 A0A1W2PP64 1363 aa16.32■□□□□ 0.2
DDX39A-219ENST00000592927 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-219ENST00000592927 HSPA6P17066 643 aa16.32■□□□□ 0.2
DDX39A-219ENST00000592927 USP6P35125 1406 aa16.32■□□□□ 0.2
DDX39A-219ENST00000592927 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
DDX39A-219ENST00000592927 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
DDX39A-219ENST00000592927 MAP3K5Q99683 1374 aa16.32■□□□□ 0.2
DDX39A-219ENST00000592927 CD163L1Q9NR16 1453 aa16.32■□□□□ 0.2
DDX39A-219ENST00000592927 CRYBG1Q9Y4K1 1723 aa16.31■□□□□ 0.2
DDX39A-219ENST00000592927 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
DDX39A-219ENST00000592927 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
DDX39A-219ENST00000592927 PANK3Q9H999 370 aa16.29■□□□□ 0.2
DDX39A-219ENST00000592927 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-219ENST00000592927 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
DDX39A-219ENST00000592927 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
DDX39A-219ENST00000592927 TTC21AQ8NDW8 1320 aa16.28■□□□□ 0.2
DDX39A-219ENST00000592927 DDB1Q16531 1140 aa16.28■□□□□ 0.2
DDX39A-219ENST00000592927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDX39A-219ENST00000592927 ABTB2Q8N961 1025 aa16.28■□□□□ 0.2
DDX39A-219ENST00000592927 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
DDX39A-219ENST00000592927 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
DDX39A-219ENST00000592927 CARD14Q9BXL6 1004 aa16.26■□□□□ 0.19
DDX39A-219ENST00000592927 PEAK1Q9H792 1746 aa16.25■□□□□ 0.19
DDX39A-219ENST00000592927 MARCH10Q8NA82 808 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-219ENST00000592927 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
DDX39A-219ENST00000592927 NLRP6P59044 892 aa16.24■□□□□ 0.19
DDX39A-219ENST00000592927 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
DDX39A-219ENST00000592927 PARP4Q9UKK3 1724 aaKnown RBP16.23■□□□□ 0.19
DDX39A-219ENST00000592927 CAPN15O75808 1086 aa16.23■□□□□ 0.19
DDX39A-219ENST00000592927 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
DDX39A-219ENST00000592927 NME9Q86XW9 330 aa16.23■□□□□ 0.19
DDX39A-219ENST00000592927 GPBP1L1Q9HC44 474 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-219ENST00000592927 ATP10DQ9P241 1426 aa16.22■□□□□ 0.19
DDX39A-219ENST00000592927 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
DDX39A-219ENST00000592927 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
DDX39A-219ENST00000592927 CPDO75976 1380 aa16.22■□□□□ 0.19
DDX39A-219ENST00000592927 PHRF1Q9P1Y6 1649 aaKnown RBP16.22■□□□□ 0.19
DDX39A-219ENST00000592927 CRB1P82279 1406 aa16.21■□□□□ 0.19
DDX39A-219ENST00000592927 GRIN3BO60391 1043 aa16.21■□□□□ 0.19
DDX39A-219ENST00000592927 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
DDX39A-219ENST00000592927 YBX3P16989 372 aaKnown RBP eCLIP16.2■□□□□ 0.182e-7■□□□□ 10
DDX39A-219ENST00000592927 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
DDX39A-219ENST00000592927 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-219ENST00000592927 ZBTB7CA1YPR0 619 aa16.19■□□□□ 0.18
DDX39A-219ENST00000592927 FYB1O15117 783 aa16.19■□□□□ 0.18
DDX39A-219ENST00000592927 POLD1P28340 1107 aa16.19■□□□□ 0.18
DDX39A-219ENST00000592927 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
DDX39A-219ENST00000592927 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 ANP32CO43423 234 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 GCP02774 474 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 MIER1Q8N108 512 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 COG3Q96JB2 828 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 GGNBP2Q9H3C7 697 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 BCL9O00512 1426 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 USP19O94966 1318 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 PIK3C2AO00443 1686 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
DDX39A-219ENST00000592927 AATKQ6ZMQ8 1374 aa16.17■□□□□ 0.18
DDX39A-219ENST00000592927 ZNF827Q17R98 1081 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms