RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
MBD1-227ENST00000592060 NEFMP07197 916 aa20.25■□□□□ 0.83
MBD1-227ENST00000592060 ZKSCAN2Q63HK3 967 aa20.25■□□□□ 0.83
MBD1-227ENST00000592060 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
MBD1-227ENST00000592060 ZNF142P52746 1687 aaPredicted RBP20.25■□□□□ 0.83
MBD1-227ENST00000592060 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
MBD1-227ENST00000592060 FMN2Q9NZ56 1722 aa20.24■□□□□ 0.83
MBD1-227ENST00000592060 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
MBD1-227ENST00000592060 NUTM2FA1L443 756 aa20.23■□□□□ 0.83
MBD1-227ENST00000592060 MVPQ14764 893 aaKnown RBP20.23■□□□□ 0.83
MBD1-227ENST00000592060 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
MBD1-227ENST00000592060 PAK3O75914 559 aaPredicted RBP20.21■□□□□ 0.83
MBD1-227ENST00000592060 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
MBD1-227ENST00000592060 PCDHB15Q9Y5E8 787 aa20.21■□□□□ 0.83
MBD1-227ENST00000592060 PIK3C2AO00443 1686 aa20.21■□□□□ 0.83
MBD1-227ENST00000592060 C8orf34Q49A92 452 aa20.21■□□□□ 0.83
MBD1-227ENST00000592060 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
MBD1-227ENST00000592060 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
MBD1-227ENST00000592060 FAM161AQ3B820 660 aa20.2■□□□□ 0.82
MBD1-227ENST00000592060 ANKARQ7Z5J8 1434 aa20.2■□□□□ 0.82
MBD1-227ENST00000592060 TRIM27P14373 513 aa20.19■□□□□ 0.82
MBD1-227ENST00000592060 RGS3P49796 1198 aa20.19■□□□□ 0.82
MBD1-227ENST00000592060 USP54Q70EL1 1684 aa20.19■□□□□ 0.82
MBD1-227ENST00000592060 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
MBD1-227ENST00000592060 EIF4A2Q14240 407 aaKnown RBP20.19■□□□□ 0.82
MBD1-227ENST00000592060 ALDH1L2Q3SY69 923 aa20.19■□□□□ 0.82
MBD1-227ENST00000592060 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
MBD1-227ENST00000592060 MARF1Q9Y4F3 1742 aaKnown RBP20.18■□□□□ 0.82
MBD1-227ENST00000592060 CHD2O14647 1828 aaKnown RBP20.18■□□□□ 0.82
MBD1-227ENST00000592060 ADAMTSL3P82987 1691 aa20.18■□□□□ 0.82
MBD1-227ENST00000592060 ZNF853P0CG23 659 aa20.18■□□□□ 0.82
MBD1-227ENST00000592060 ATF7IPQ6VMQ6 1270 aa20.17■□□□□ 0.82
MBD1-227ENST00000592060 FTSJ3Q8IY81 847 aaKnown RBP20.17■□□□□ 0.82
MBD1-227ENST00000592060 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
MBD1-227ENST00000592060 IFT57Q9NWB7 429 aa20.17■□□□□ 0.82
MBD1-227ENST00000592060 KIF16BQ96L93 1317 aa20.17■□□□□ 0.82
MBD1-227ENST00000592060 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
MBD1-227ENST00000592060 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
MBD1-227ENST00000592060 NOB1Q9ULX3 412 aaKnown RBP20.16■□□□□ 0.82
MBD1-227ENST00000592060 BRPF1P55201 1214 aaPredicted RBP20.15■□□□□ 0.82
MBD1-227ENST00000592060 GNAI1P63096 354 aa20.15■□□□□ 0.82
MBD1-227ENST00000592060 KCNA6P17658 529 aa20.15■□□□□ 0.82
MBD1-227ENST00000592060 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.81
MBD1-227ENST00000592060 AEBP1Q8IUX7 1158 aa20.14■□□□□ 0.81
MBD1-227ENST00000592060 LAS1LQ9Y4W2 734 aaKnown RBP20.13■□□□□ 0.81
MBD1-227ENST00000592060 MBIPQ9NS73 344 aa20.12■□□□□ 0.81
MBD1-227ENST00000592060 DDX19BQ9UMR2 479 aa20.12■□□□□ 0.81
MBD1-227ENST00000592060 VAMP4O75379 141 aa20.12■□□□□ 0.81
MBD1-227ENST00000592060 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
MBD1-227ENST00000592060 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
MBD1-227ENST00000592060 SULT6B1Q6IMI4 303 aa20.11■□□□□ 0.81
MBD1-227ENST00000592060 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
MBD1-227ENST00000592060 SBNO1A3KN83 1393 aa20.11■□□□□ 0.81
MBD1-227ENST00000592060 ARHGEF10O15013 1369 aa20.11■□□□□ 0.81
MBD1-227ENST00000592060 HSP90AB2PQ58FF8 381 aa20.1■□□□□ 0.81
MBD1-227ENST00000592060 TMEM57Q8N5G2 664 aa20.1■□□□□ 0.81
MBD1-227ENST00000592060 NGDNQ8NEJ9 315 aaKnown RBP20.1■□□□□ 0.81
MBD1-227ENST00000592060 MAP3K19Q56UN5 1328 aa20.1■□□□□ 0.81
MBD1-227ENST00000592060 ITPRIPQ8IWB1 547 aa20.1■□□□□ 0.81
MBD1-227ENST00000592060 FAM83GA6ND36 823 aa20.09■□□□□ 0.81
MBD1-227ENST00000592060 MRPL50Q8N5N7 158 aaKnown RBP20.09■□□□□ 0.81
MBD1-227ENST00000592060 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
MBD1-227ENST00000592060 FLT4P35916 1363 aa20.09■□□□□ 0.81
MBD1-227ENST00000592060 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
MBD1-227ENST00000592060 HDAC1Q13547 482 aaPredicted RBP20.07■□□□□ 0.8
MBD1-227ENST00000592060 ZBTB40Q9NUA8 1239 aa20.06■□□□□ 0.8
MBD1-227ENST00000592060 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
MBD1-227ENST00000592060 KDRP35968 1356 aa20.05■□□□□ 0.8
MBD1-227ENST00000592060 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
MBD1-227ENST00000592060 ARHGAP45Q92619 1136 aa20.05■□□□□ 0.8
MBD1-227ENST00000592060 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
MBD1-227ENST00000592060 SETD1BQ9UPS6 1966 aaKnown RBP20.05■□□□□ 0.8
MBD1-227ENST00000592060 SOX12O15370 315 aa20.04■□□□□ 0.8
MBD1-227ENST00000592060 TWISTNBQ3B726 338 aaPredicted RBP20.04■□□□□ 0.8
MBD1-227ENST00000592060 C8orf58Q8NAV2 365 aa20.04■□□□□ 0.8
MBD1-227ENST00000592060 KIF24Q5T7B8 1368 aa20.02■□□□□ 0.8
MBD1-227ENST00000592060 NWD1Q149M9 1564 aa20.02■□□□□ 0.8
MBD1-227ENST00000592060 ABCC4O15439 1325 aa20.02■□□□□ 0.79
MBD1-227ENST00000592060 IGSF1Q8N6C5 1336 aa20.02■□□□□ 0.79
MBD1-227ENST00000592060 CRB1P82279 1406 aa20.01■□□□□ 0.79
MBD1-227ENST00000592060 LRRC37A3O60309 1634 aa20.01■□□□□ 0.79
MBD1-227ENST00000592060 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
MBD1-227ENST00000592060 ELL2O00472 640 aaPredicted RBP20■□□□□ 0.79
MBD1-227ENST00000592060 CHL1O00533 1208 aa19.99■□□□□ 0.79
MBD1-227ENST00000592060 NLRP6P59044 892 aa19.99■□□□□ 0.79
MBD1-227ENST00000592060 SMC5Q8IY18 1101 aa19.99■□□□□ 0.79
MBD1-227ENST00000592060 LTN1O94822 1766 aa19.99■□□□□ 0.79
MBD1-227ENST00000592060 USP19O94966 1318 aa19.99■□□□□ 0.79
MBD1-227ENST00000592060 KIAA0232Q92628 1395 aa19.98■□□□□ 0.79
MBD1-227ENST00000592060 AMPHP49418 695 aa19.98■□□□□ 0.79
MBD1-227ENST00000592060 MCM10Q7L590 875 aa19.98■□□□□ 0.79
MBD1-227ENST00000592060 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
MBD1-227ENST00000592060 EYA1Q99502 592 aa19.97■□□□□ 0.79
MBD1-227ENST00000592060 ZBTB7BO15156 539 aaPredicted RBP19.96■□□□□ 0.79
MBD1-227ENST00000592060 PHF8Q9UPP1 1060 aa19.96■□□□□ 0.79
MBD1-227ENST00000592060 NFAT5O94916 1531 aa19.96■□□□□ 0.79
MBD1-227ENST00000592060 HOXC9P31274 260 aa19.95■□□□□ 0.78
MBD1-227ENST00000592060 MTHFSDQ2M296 383 aaKnown RBP19.95■□□□□ 0.78
MBD1-227ENST00000592060 RTL1A6NKG5 1358 aa19.95■□□□□ 0.78
MBD1-227ENST00000592060 RGS12O14924 1447 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms