RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 NRKQ7Z2Y5 1582 aa13.87□□□□□ -0.19
BRCA1-227ENST00000591849 SLIT3O75094 1523 aa13.86□□□□□ -0.19
BRCA1-227ENST00000591849 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
BRCA1-227ENST00000591849 AXIN2Q9Y2T1 843 aa13.86□□□□□ -0.19
BRCA1-227ENST00000591849 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
BRCA1-227ENST00000591849 NSD3Q9BZ95 1437 aa13.85□□□□□ -0.19
BRCA1-227ENST00000591849 PDE3BQ13370 1112 aa13.85□□□□□ -0.19
BRCA1-227ENST00000591849 PANK3Q9H999 370 aa13.85□□□□□ -0.19
BRCA1-227ENST00000591849 THRAP3Q9Y2W1 955 aaKnown RBP13.85□□□□□ -0.19
BRCA1-227ENST00000591849 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
BRCA1-227ENST00000591849 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
BRCA1-227ENST00000591849 C11orf95C9JLR9 678 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-227ENST00000591849 SF3B2Q13435 895 aaKnown RBP13.84□□□□□ -0.19
BRCA1-227ENST00000591849 BARGINQ6ZT62 677 aa13.84□□□□□ -0.19
BRCA1-227ENST00000591849 LTV1Q96GA3 475 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-227ENST00000591849 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
BRCA1-227ENST00000591849 RGPD1P0DJD0 1748 aa13.84□□□□□ -0.19
BRCA1-227ENST00000591849 MON2Q7Z3U7 1717 aa13.84□□□□□ -0.19
BRCA1-227ENST00000591849 WDR17Q8IZU2 1322 aa13.83□□□□□ -0.2
BRCA1-227ENST00000591849 LRP5O75197 1615 aa13.82□□□□□ -0.2
BRCA1-227ENST00000591849 CRB1P82279 1406 aa13.82□□□□□ -0.2
BRCA1-227ENST00000591849 COL5A2P05997 1499 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-227ENST00000591849 FBLN1P23142 703 aa13.82□□□□□ -0.2
BRCA1-227ENST00000591849 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
BRCA1-227ENST00000591849 IP6K1Q92551 441 aa13.82□□□□□ -0.2
BRCA1-227ENST00000591849 KNSTRNQ9Y448 316 aa13.82□□□□□ -0.2
BRCA1-227ENST00000591849 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
BRCA1-227ENST00000591849 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
BRCA1-227ENST00000591849 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-227ENST00000591849 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
BRCA1-227ENST00000591849 CARD10Q9BWT7 1032 aa13.81□□□□□ -0.2
BRCA1-227ENST00000591849 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
BRCA1-227ENST00000591849 CDCA7Q9BWT1 371 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-227ENST00000591849 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
BRCA1-227ENST00000591849 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
BRCA1-227ENST00000591849 HOXC9P31274 260 aa13.79□□□□□ -0.2
BRCA1-227ENST00000591849 TNNT2P45379 298 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-227ENST00000591849 DDB1Q16531 1140 aa13.79□□□□□ -0.2
BRCA1-227ENST00000591849 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
BRCA1-227ENST00000591849 NFAT5O94916 1531 aa13.79□□□□□ -0.2
BRCA1-227ENST00000591849 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
BRCA1-227ENST00000591849 EXOC5O00471 708 aa13.78□□□□□ -0.2
BRCA1-227ENST00000591849 FAM196AQ6ZSG2 479 aa13.78□□□□□ -0.2
BRCA1-227ENST00000591849 ERBB3P21860 1342 aa13.77□□□□□ -0.21
BRCA1-227ENST00000591849 MORC1Q86VD1 984 aa13.77□□□□□ -0.21
BRCA1-227ENST00000591849 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
BRCA1-227ENST00000591849 CCDC7Q96M83 1385 aa13.77□□□□□ -0.21
BRCA1-227ENST00000591849 IL2RBP14784 551 aa13.74□□□□□ -0.21
BRCA1-227ENST00000591849 BAG6P46379 1132 aa13.74□□□□□ -0.21
BRCA1-227ENST00000591849 CNGB1Q14028 1251 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-227ENST00000591849 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
BRCA1-227ENST00000591849 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
BRCA1-227ENST00000591849 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
BRCA1-227ENST00000591849 TRIM37O94972 964 aa13.73□□□□□ -0.21
BRCA1-227ENST00000591849 ABCC6O95255 1503 aa13.73□□□□□ -0.21
BRCA1-227ENST00000591849 FLT4P35916 1363 aa13.72□□□□□ -0.21
BRCA1-227ENST00000591849 ZEB1P37275 1124 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-227ENST00000591849 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
BRCA1-227ENST00000591849 COL18A1P39060 1754 aa13.72□□□□□ -0.21
BRCA1-227ENST00000591849 MYOM1P52179 1685 aa13.72□□□□□ -0.21
BRCA1-227ENST00000591849 DISP2A7MBM2 1401 aa13.72□□□□□ -0.21
BRCA1-227ENST00000591849 NSD2O96028 1365 aa13.71□□□□□ -0.21
BRCA1-227ENST00000591849 WASHC2AQ641Q2 1341 aa13.71□□□□□ -0.21
BRCA1-227ENST00000591849 CC2D1BQ5T0F9 858 aaKnown RBP13.71□□□□□ -0.21
BRCA1-227ENST00000591849 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
BRCA1-227ENST00000591849 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
BRCA1-227ENST00000591849 USP54Q70EL1 1684 aa13.71□□□□□ -0.21
BRCA1-227ENST00000591849 INSRP06213 1382 aa13.71□□□□□ -0.22
BRCA1-227ENST00000591849 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.22
BRCA1-227ENST00000591849 APBA3O96018 575 aa13.7□□□□□ -0.22
BRCA1-227ENST00000591849 USHBP1Q8N6Y0 703 aa13.7□□□□□ -0.22
BRCA1-227ENST00000591849 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
BRCA1-227ENST00000591849 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-227ENST00000591849 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
BRCA1-227ENST00000591849 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-227ENST00000591849 DDX54Q8TDD1 881 aaKnown RBP13.69□□□□□ -0.22
BRCA1-227ENST00000591849 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
BRCA1-227ENST00000591849 RREB1Q92766 1687 aa13.69□□□□□ -0.22
BRCA1-227ENST00000591849 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
BRCA1-227ENST00000591849 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
BRCA1-227ENST00000591849 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-227ENST00000591849 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-227ENST00000591849 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
BRCA1-227ENST00000591849 LTN1O94822 1766 aa13.67□□□□□ -0.22
BRCA1-227ENST00000591849 OVOS2A0A0G2JMS6 1433 aa13.66□□□□□ -0.22
BRCA1-227ENST00000591849 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
BRCA1-227ENST00000591849 PER1O15534 1290 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-227ENST00000591849 WNK3Q9BYP7 1800 aa13.66□□□□□ -0.22
BRCA1-227ENST00000591849 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
BRCA1-227ENST00000591849 RGPD3A6NKT7 1758 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-227ENST00000591849 RGPD4Q7Z3J3 1758 aa13.65□□□□□ -0.22
BRCA1-227ENST00000591849 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
BRCA1-227ENST00000591849 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
BRCA1-227ENST00000591849 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-227ENST00000591849 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
BRCA1-227ENST00000591849 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
BRCA1-227ENST00000591849 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
BRCA1-227ENST00000591849 EYA1Q99502 592 aa13.63□□□□□ -0.23
BRCA1-227ENST00000591849 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
BRCA1-227ENST00000591849 MTHFSP49914 203 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms