RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
PTBP1-216ENST00000590887 HOXC9P31274 260 aa17.03■□□□□ 0.32
PTBP1-216ENST00000590887 EIF4A2Q14240 407 aaKnown RBP17.03■□□□□ 0.32
PTBP1-216ENST00000590887 MARF1Q9Y4F3 1742 aaKnown RBP17.03■□□□□ 0.32
PTBP1-216ENST00000590887 SOS2Q07890 1332 aaPredicted RBP17.02■□□□□ 0.32
PTBP1-216ENST00000590887 PXDNQ92626 1479 aa17.02■□□□□ 0.32
PTBP1-216ENST00000590887 LMOD3Q0VAK6 560 aa17.02■□□□□ 0.32
PTBP1-216ENST00000590887 HSP90AB2PQ58FF8 381 aa17.02■□□□□ 0.32
PTBP1-216ENST00000590887 WDR63Q8IWG1 891 aa17.02■□□□□ 0.32
PTBP1-216ENST00000590887 LTN1O94822 1766 aa17.02■□□□□ 0.31
PTBP1-216ENST00000590887 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
PTBP1-216ENST00000590887 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
PTBP1-216ENST00000590887 PLEKHF1Q96S99 279 aa17.01■□□□□ 0.31
PTBP1-216ENST00000590887 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
PTBP1-216ENST00000590887 PHRF1Q9P1Y6 1649 aaKnown RBP17■□□□□ 0.31
PTBP1-216ENST00000590887 E9PSI1 815 aa17■□□□□ 0.31
PTBP1-216ENST00000590887 PRKAR2BP31323 418 aa17■□□□□ 0.31
PTBP1-216ENST00000590887 NFAT5O94916 1531 aa17■□□□□ 0.31
PTBP1-216ENST00000590887 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
PTBP1-216ENST00000590887 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
PTBP1-216ENST00000590887 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
PTBP1-216ENST00000590887 HAP1P54257 671 aaPredicted RBP16.98■□□□□ 0.31
PTBP1-216ENST00000590887 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
PTBP1-216ENST00000590887 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
PTBP1-216ENST00000590887 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
PTBP1-216ENST00000590887 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
PTBP1-216ENST00000590887 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
PTBP1-216ENST00000590887 HMOX1P09601 288 aa16.97■□□□□ 0.31
PTBP1-216ENST00000590887 RIPK4P57078 832 aa16.97■□□□□ 0.31
PTBP1-216ENST00000590887 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
PTBP1-216ENST00000590887 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
PTBP1-216ENST00000590887 ABCC6O95255 1503 aa16.96■□□□□ 0.31
PTBP1-216ENST00000590887 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
PTBP1-216ENST00000590887 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
PTBP1-216ENST00000590887 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
PTBP1-216ENST00000590887 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
PTBP1-216ENST00000590887 IGSF1Q8N6C5 1336 aa16.95■□□□□ 0.3
PTBP1-216ENST00000590887 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
PTBP1-216ENST00000590887 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
PTBP1-216ENST00000590887 GTF3C3Q9Y5Q9 886 aa16.94■□□□□ 0.3
PTBP1-216ENST00000590887 IL16Q14005 1332 aa16.94■□□□□ 0.3
PTBP1-216ENST00000590887 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
PTBP1-216ENST00000590887 LTV1Q96GA3 475 aaPredicted RBP16.93■□□□□ 0.3
PTBP1-216ENST00000590887 EYA1Q99502 592 aa16.93■□□□□ 0.3
PTBP1-216ENST00000590887 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
PTBP1-216ENST00000590887 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
PTBP1-216ENST00000590887 CPDO75976 1380 aa16.92■□□□□ 0.3
PTBP1-216ENST00000590887 ZC3H6P61129 1189 aaKnown RBP16.92■□□□□ 0.3
PTBP1-216ENST00000590887 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
PTBP1-216ENST00000590887 AHDC1Q5TGY3 1603 aaPredicted RBP16.92■□□□□ 0.3
PTBP1-216ENST00000590887 KDRP35968 1356 aa16.91■□□□□ 0.3
PTBP1-216ENST00000590887 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
PTBP1-216ENST00000590887 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
PTBP1-216ENST00000590887 TRMT2AQ8IZ69 625 aaKnown RBP16.9■□□□□ 0.3
PTBP1-216ENST00000590887 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
PTBP1-216ENST00000590887 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
PTBP1-216ENST00000590887 COL16A1Q07092 1604 aaPredicted RBP16.89■□□□□ 0.29
PTBP1-216ENST00000590887 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
PTBP1-216ENST00000590887 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
PTBP1-216ENST00000590887 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
PTBP1-216ENST00000590887 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
PTBP1-216ENST00000590887 RTF1Q92541 710 aaKnown RBP16.89■□□□□ 0.29
PTBP1-216ENST00000590887 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
PTBP1-216ENST00000590887 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
PTBP1-216ENST00000590887 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
PTBP1-216ENST00000590887 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
PTBP1-216ENST00000590887 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
PTBP1-216ENST00000590887 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
PTBP1-216ENST00000590887 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
PTBP1-216ENST00000590887 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
PTBP1-216ENST00000590887 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
PTBP1-216ENST00000590887 TRIM35Q9UPQ4 493 aa16.87■□□□□ 0.29
PTBP1-216ENST00000590887 CRYBG1Q9Y4K1 1723 aa16.87■□□□□ 0.29
PTBP1-216ENST00000590887 GNAI1P63096 354 aa16.86■□□□□ 0.29
PTBP1-216ENST00000590887 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-216ENST00000590887 AEBP1Q8IUX7 1158 aa16.86■□□□□ 0.29
PTBP1-216ENST00000590887 CABLES1Q8TDN4 633 aa16.86■□□□□ 0.29
PTBP1-216ENST00000590887 PLEKHG2Q9H7P9 1386 aa16.86■□□□□ 0.29
PTBP1-216ENST00000590887 ERBB3P21860 1342 aa16.85■□□□□ 0.29
PTBP1-216ENST00000590887 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
PTBP1-216ENST00000590887 NBPF6Q5VWK0 638 aa16.84■□□□□ 0.29
PTBP1-216ENST00000590887 NBPF4Q96M43 638 aa16.84■□□□□ 0.29
PTBP1-216ENST00000590887 DLG5Q8TDM6 1919 aa16.83■□□□□ 0.28
PTBP1-216ENST00000590887 IFT57Q9NWB7 429 aa16.83■□□□□ 0.28
PTBP1-216ENST00000590887 EVA1CP58658 441 aa16.82■□□□□ 0.28
PTBP1-216ENST00000590887 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
PTBP1-216ENST00000590887 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
PTBP1-216ENST00000590887 COL18A1P39060 1754 aa16.82■□□□□ 0.28
PTBP1-216ENST00000590887 RGPD5Q99666 1765 aa16.82■□□□□ 0.28
PTBP1-216ENST00000590887 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
PTBP1-216ENST00000590887 JCADQ9P266 1359 aa16.81■□□□□ 0.28
PTBP1-216ENST00000590887 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
PTBP1-216ENST00000590887 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
PTBP1-216ENST00000590887 FKBP8Q14318 412 aa16.81■□□□□ 0.28
PTBP1-216ENST00000590887 MTHFSDQ2M296 383 aaKnown RBP16.81■□□□□ 0.28
PTBP1-216ENST00000590887 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
PTBP1-216ENST00000590887 AXIN2Q9Y2T1 843 aa16.81■□□□□ 0.28
PTBP1-216ENST00000590887 NCAPD2Q15021 1401 aa16.8■□□□□ 0.28
PTBP1-216ENST00000590887 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
PTBP1-216ENST00000590887 ABCA3Q99758 1704 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms