RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
TPM4-212ENST00000590180 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
TPM4-212ENST00000590180 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
TPM4-212ENST00000590180 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
TPM4-212ENST00000590180 MON2Q7Z3U7 1717 aa16.76■□□□□ 0.27
TPM4-212ENST00000590180 WDR17Q8IZU2 1322 aa16.75■□□□□ 0.27
TPM4-212ENST00000590180 FYB1O15117 783 aa16.75■□□□□ 0.27
TPM4-212ENST00000590180 GGNBP2Q9H3C7 697 aa16.75■□□□□ 0.27
TPM4-212ENST00000590180 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
TPM4-212ENST00000590180 CRB1P82279 1406 aa16.74■□□□□ 0.27
TPM4-212ENST00000590180 FBLN1P23142 703 aa16.74■□□□□ 0.27
TPM4-212ENST00000590180 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
TPM4-212ENST00000590180 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
TPM4-212ENST00000590180 DEFB132Q7Z7B7 95 aa16.73■□□□□ 0.27
TPM4-212ENST00000590180 CARD14Q9BXL6 1004 aa16.73■□□□□ 0.27
TPM4-212ENST00000590180 BLMP54132 1417 aaPredicted RBP16.72■□□□□ 0.27
TPM4-212ENST00000590180 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
TPM4-212ENST00000590180 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
TPM4-212ENST00000590180 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
TPM4-212ENST00000590180 AMPHP49418 695 aa16.71■□□□□ 0.27
TPM4-212ENST00000590180 ANKRD24Q8TF21 1146 aa16.71■□□□□ 0.27
TPM4-212ENST00000590180 NFAT5O94916 1531 aa16.7■□□□□ 0.26
TPM4-212ENST00000590180 DDB1Q16531 1140 aa16.7■□□□□ 0.26
TPM4-212ENST00000590180 IP6K1Q92551 441 aa16.7■□□□□ 0.26
TPM4-212ENST00000590180 COL18A1P39060 1754 aa16.69■□□□□ 0.26
TPM4-212ENST00000590180 TRIM37O94972 964 aa16.69■□□□□ 0.26
TPM4-212ENST00000590180 BAG6P46379 1132 aa16.69■□□□□ 0.26
TPM4-212ENST00000590180 CDCA7Q9BWT1 371 aaPredicted RBP16.69■□□□□ 0.26
TPM4-212ENST00000590180 OVOS2A0A0J9YW53 1432 aa16.69■□□□□ 0.26
TPM4-212ENST00000590180 OVOS2Q6IE36 1432 aa16.69■□□□□ 0.26
TPM4-212ENST00000590180 EXOC5O00471 708 aa16.68■□□□□ 0.26
TPM4-212ENST00000590180 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
TPM4-212ENST00000590180 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
TPM4-212ENST00000590180 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
TPM4-212ENST00000590180 PANK3Q9H999 370 aa16.67■□□□□ 0.26
TPM4-212ENST00000590180 THSD7AQ9UPZ6 1657 aa16.66■□□□□ 0.26
TPM4-212ENST00000590180 HOXC9P31274 260 aa16.66■□□□□ 0.26
TPM4-212ENST00000590180 NSD3Q9BZ95 1437 aa16.66■□□□□ 0.26
TPM4-212ENST00000590180 ERBB3P21860 1342 aa16.66■□□□□ 0.26
TPM4-212ENST00000590180 CCDC7Q96M83 1385 aa16.65■□□□□ 0.26
TPM4-212ENST00000590180 RGPD5Q99666 1765 aa16.65■□□□□ 0.26
TPM4-212ENST00000590180 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
TPM4-212ENST00000590180 APBA3O96018 575 aa16.64■□□□□ 0.25
TPM4-212ENST00000590180 CGNL1Q0VF96 1302 aa16.64■□□□□ 0.25
TPM4-212ENST00000590180 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
TPM4-212ENST00000590180 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
TPM4-212ENST00000590180 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
TPM4-212ENST00000590180 IL2RBP14784 551 aa16.62■□□□□ 0.25
TPM4-212ENST00000590180 EP400Q96L91 3159 aa16.62■□□□□ 0.25
TPM4-212ENST00000590180 ABCC6O95255 1503 aa16.6■□□□□ 0.25
TPM4-212ENST00000590180 LTN1O94822 1766 aa16.6■□□□□ 0.25
TPM4-212ENST00000590180 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
TPM4-212ENST00000590180 HSP90AB2PQ58FF8 381 aa16.6■□□□□ 0.25
TPM4-212ENST00000590180 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
TPM4-212ENST00000590180 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.24
TPM4-212ENST00000590180 EMILIN1Q9Y6C2 1016 aa16.58■□□□□ 0.24
TPM4-212ENST00000590180 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
TPM4-212ENST00000590180 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
TPM4-212ENST00000590180 NBPF6Q5VWK0 638 aa16.57■□□□□ 0.24
TPM4-212ENST00000590180 NBPF4Q96M43 638 aa16.57■□□□□ 0.24
TPM4-212ENST00000590180 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
TPM4-212ENST00000590180 MYOM1P52179 1685 aa16.56■□□□□ 0.24
TPM4-212ENST00000590180 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
TPM4-212ENST00000590180 USHBP1Q8N6Y0 703 aa16.56■□□□□ 0.24
TPM4-212ENST00000590180 DDX54Q8TDD1 881 aaKnown RBP16.56■□□□□ 0.24
TPM4-212ENST00000590180 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
TPM4-212ENST00000590180 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
TPM4-212ENST00000590180 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
TPM4-212ENST00000590180 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
TPM4-212ENST00000590180 INSRP06213 1382 aa16.54■□□□□ 0.24
TPM4-212ENST00000590180 FLT4P35916 1363 aa16.54■□□□□ 0.24
TPM4-212ENST00000590180 PTF1AQ7RTS3 328 aa16.54■□□□□ 0.24
TPM4-212ENST00000590180 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
TPM4-212ENST00000590180 POLKQ9UBT6 870 aa16.54■□□□□ 0.24
TPM4-212ENST00000590180 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
TPM4-212ENST00000590180 PSDA5PKW4 1024 aaPredicted RBP16.53■□□□□ 0.24
TPM4-212ENST00000590180 RAPGEF4Q8WZA2 1011 aa16.53■□□□□ 0.24
TPM4-212ENST00000590180 KIF20BQ96Q89 1820 aa16.53■□□□□ 0.24
TPM4-212ENST00000590180 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
TPM4-212ENST00000590180 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
TPM4-212ENST00000590180 ZCRB1Q8TBF4 217 aaKnown RBP16.52■□□□□ 0.24
TPM4-212ENST00000590180 WASHC2AQ641Q2 1341 aa16.51■□□□□ 0.23
TPM4-212ENST00000590180 KAT6BQ8WYB5 2073 aa16.51■□□□□ 0.23
TPM4-212ENST00000590180 KCNQ2O43526 872 aa16.51■□□□□ 0.23
TPM4-212ENST00000590180 TATP17735 454 aaPredicted RBP16.51■□□□□ 0.23
TPM4-212ENST00000590180 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
TPM4-212ENST00000590180 PLSCR1O15162 318 aa16.5■□□□□ 0.23
TPM4-212ENST00000590180 NBPF14Q5TI25 921 aa16.5■□□□□ 0.23
TPM4-212ENST00000590180 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
TPM4-212ENST00000590180 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
TPM4-212ENST00000590180 R3HDM1Q15032 1099 aaKnown RBP16.49■□□□□ 0.23
TPM4-212ENST00000590180 BCL9O00512 1426 aa16.48■□□□□ 0.23
TPM4-212ENST00000590180 NSD2O96028 1365 aa16.48■□□□□ 0.23
TPM4-212ENST00000590180 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
TPM4-212ENST00000590180 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
TPM4-212ENST00000590180 EYA1Q99502 592 aa16.47■□□□□ 0.23
TPM4-212ENST00000590180 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.23
TPM4-212ENST00000590180 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
TPM4-212ENST00000590180 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
TPM4-212ENST00000590180 WNK3Q9BYP7 1800 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms