RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CEP170BQ9Y4F5 1589 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-210ENST00000590061 SETBP1Q9Y6X0 1596 aa10.2□□□□□ -0.78
SMAD4-210ENST00000590061 ZNF142P52746 1687 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-210ENST00000590061 MYO3AQ8NEV4 1616 aa10.19□□□□□ -0.78
SMAD4-210ENST00000590061 ARHGAP23Q9P227 1491 aa10.19□□□□□ -0.78
SMAD4-210ENST00000590061 SPDYE16A6NNV3 312 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-210ENST00000590061 HSPA2P54652 639 aa10.19□□□□□ -0.78
SMAD4-210ENST00000590061 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
SMAD4-210ENST00000590061 TBX22Q9Y458 520 aa10.19□□□□□ -0.78
SMAD4-210ENST00000590061 PIK3R4Q99570 1358 aa10.18□□□□□ -0.78
SMAD4-210ENST00000590061 ADGRF5Q8IZF2 1346 aa10.18□□□□□ -0.78
SMAD4-210ENST00000590061 EPAS1Q99814 870 aa10.18□□□□□ -0.78
SMAD4-210ENST00000590061 SCAF11Q99590 1463 aaKnown RBP10.17□□□□□ -0.78
SMAD4-210ENST00000590061 USP47Q96K76 1375 aa10.17□□□□□ -0.78
SMAD4-210ENST00000590061 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
SMAD4-210ENST00000590061 COL9A1P20849 921 aa10.17□□□□□ -0.78
SMAD4-210ENST00000590061 WDR70Q9NW82 654 aa10.17□□□□□ -0.78
SMAD4-210ENST00000590061 TRPM1Q7Z4N2 1603 aa10.17□□□□□ -0.78
SMAD4-210ENST00000590061 BHMG1C9JSJ3 638 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-210ENST00000590061 PLCB2Q00722 1185 aa10.16□□□□□ -0.78
SMAD4-210ENST00000590061 DDX12PQ92771 950 aa10.16□□□□□ -0.78
SMAD4-210ENST00000590061 DIP2AQ14689 1571 aa10.16□□□□□ -0.78
SMAD4-210ENST00000590061 MYO5BQ9ULV0 1848 aa10.15□□□□□ -0.78
SMAD4-210ENST00000590061 TMF1P82094 1093 aa10.15□□□□□ -0.78
SMAD4-210ENST00000590061 CFAP70Q5T0N1 1121 aa10.15□□□□□ -0.78
SMAD4-210ENST00000590061 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
SMAD4-210ENST00000590061 HSPA5P11021 654 aaKnown RBP10.14□□□□□ -0.79
SMAD4-210ENST00000590061 ABCC11Q96J66 1382 aa10.14□□□□□ -0.79
SMAD4-210ENST00000590061 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
SMAD4-210ENST00000590061 PRIM1P49642 420 aaKnown RBP10.13□□□□□ -0.79
SMAD4-210ENST00000590061 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-210ENST00000590061 NBPF1Q3BBV0 1214 aa10.13□□□□□ -0.79
SMAD4-210ENST00000590061 CERKQ8TCT0 537 aa10.13□□□□□ -0.79
SMAD4-210ENST00000590061 LRPPRCP42704 1394 aaKnown RBP10.13□□□□□ -0.79
SMAD4-210ENST00000590061 CENPJQ9HC77 1338 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-210ENST00000590061 MED14O60244 1454 aa10.12□□□□□ -0.79
SMAD4-210ENST00000590061 ALKQ9UM73 1620 aa10.12□□□□□ -0.79
SMAD4-210ENST00000590061 C6orf132Q5T0Z8 1188 aa10.12□□□□□ -0.79
SMAD4-210ENST00000590061 KCNV2Q8TDN2 545 aa10.12□□□□□ -0.79
SMAD4-210ENST00000590061 POGKQ9P215 609 aa10.12□□□□□ -0.79
SMAD4-210ENST00000590061 FAM135BQ49AJ0 1406 aa10.11□□□□□ -0.79
SMAD4-210ENST00000590061 YTHDC2Q9H6S0 1430 aaKnown RBP10.11□□□□□ -0.79
SMAD4-210ENST00000590061 ST20-MTHFSA0A0A6YYL1 179 aa10.11□□□□□ -0.79
SMAD4-210ENST00000590061 LTKP29376 864 aa10.11□□□□□ -0.79
SMAD4-210ENST00000590061 NBR1Q14596 966 aa10.11□□□□□ -0.79
SMAD4-210ENST00000590061 PROX2Q3B8N5 592 aa10.1□□□□□ -0.79
SMAD4-210ENST00000590061 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
SMAD4-210ENST00000590061 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
SMAD4-210ENST00000590061 EVC2Q86UK5 1308 aa10.09□□□□□ -0.79
SMAD4-210ENST00000590061 NPHP4O75161 1426 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-210ENST00000590061 ARXQ96QS3 562 aa10.09□□□□□ -0.79
SMAD4-210ENST00000590061 TRAK1Q9UPV9 953 aa10.09□□□□□ -0.79
SMAD4-210ENST00000590061 ADGRB1O14514 1584 aa10.09□□□□□ -0.79
SMAD4-210ENST00000590061 TECPR2O15040 1411 aa10.08□□□□□ -0.8
SMAD4-210ENST00000590061 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
SMAD4-210ENST00000590061 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
SMAD4-210ENST00000590061 NINLQ9Y2I6 1382 aa10.08□□□□□ -0.8
SMAD4-210ENST00000590061 IQGAP1P46940 1657 aa10.08□□□□□ -0.8
SMAD4-210ENST00000590061 KCNA6P17658 529 aa10.07□□□□□ -0.8
SMAD4-210ENST00000590061 TMEM132EQ6IEE7 984 aa10.07□□□□□ -0.8
SMAD4-210ENST00000590061 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
SMAD4-210ENST00000590061 POLR1AO95602 1720 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-210ENST00000590061 ADAMTS13Q76LX8 1427 aa10.07□□□□□ -0.8
SMAD4-210ENST00000590061 DISP3Q9P2K9 1392 aa10.06□□□□□ -0.8
SMAD4-210ENST00000590061 OSBPP22059 807 aa10.06□□□□□ -0.8
SMAD4-210ENST00000590061 STK26Q9P289 416 aa10.06□□□□□ -0.8
SMAD4-210ENST00000590061 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
SMAD4-210ENST00000590061 PTCH1Q13635 1447 aa10.06□□□□□ -0.8
SMAD4-210ENST00000590061 NCOA3Q9Y6Q9 1424 aa10.06□□□□□ -0.8
SMAD4-210ENST00000590061 WASHC2AQ641Q2 1341 aa10.06□□□□□ -0.8
SMAD4-210ENST00000590061 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
SMAD4-210ENST00000590061 SLC26A8Q96RN1 970 aa10.05□□□□□ -0.8
SMAD4-210ENST00000590061 TESK2Q96S53 571 aa10.05□□□□□ -0.8
SMAD4-210ENST00000590061 AMOTL2Q9Y2J4 779 aa10.05□□□□□ -0.8
SMAD4-210ENST00000590061 METP08581 1390 aa10.04□□□□□ -0.8
SMAD4-210ENST00000590061 ATAD2Q6PL18 1390 aa10.04□□□□□ -0.8
SMAD4-210ENST00000590061 CCDC7Q96M83 1385 aa10.04□□□□□ -0.8
SMAD4-210ENST00000590061 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-210ENST00000590061 DIEXFQ68CQ4 756 aaKnown RBP10.04□□□□□ -0.8
SMAD4-210ENST00000590061 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
SMAD4-210ENST00000590061 PRAM1Q96QH2 718 aa10.04□□□□□ -0.8
SMAD4-210ENST00000590061 KNDC1Q76NI1 1749 aa10.04□□□□□ -0.8
SMAD4-210ENST00000590061 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
SMAD4-210ENST00000590061 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
SMAD4-210ENST00000590061 MAP3K7O43318 606 aa10.03□□□□□ -0.8
SMAD4-210ENST00000590061 ERICH6Q7L0X2 663 aa10.03□□□□□ -0.8
SMAD4-210ENST00000590061 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
SMAD4-210ENST00000590061 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
SMAD4-210ENST00000590061 NRXN3Q9Y4C0 1643 aa10.03□□□□□ -0.8
SMAD4-210ENST00000590061 SOCS7O14512 581 aa10.02□□□□□ -0.81
SMAD4-210ENST00000590061 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
SMAD4-210ENST00000590061 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.81
SMAD4-210ENST00000590061 CPS1P31327 1500 aa10.02□□□□□ -0.81
SMAD4-210ENST00000590061 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
SMAD4-210ENST00000590061 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
SMAD4-210ENST00000590061 CDHR5Q9HBB8 845 aa10.01□□□□□ -0.81
SMAD4-210ENST00000590061 TERF2IPQ9NYB0 399 aa10.01□□□□□ -0.81
SMAD4-210ENST00000590061 NKTRP30414 1462 aaKnown RBP10.01□□□□□ -0.81
SMAD4-210ENST00000590061 SETD1AO15047 1707 aaKnown RBP10.01□□□□□ -0.81
SMAD4-210ENST00000590061 ARHGEF28Q8N1W1 1705 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms