RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	FAM98C	Q17RN3	349 aa	Known RBP	24.15	■■□□□ 1.46
MBD1-221	ENST00000589867	ZBTB7C	A1YPR0	619 aa		24.13	■■□□□ 1.45
MBD1-221	ENST00000589867	FYB1	O15117	783 aa		24.12	■■□□□ 1.45
MBD1-221	ENST00000589867	LTN1	O94822	1766 aa		24.11	■■□□□ 1.45
MBD1-221	ENST00000589867	FBLN1	P23142	703 aa		24.1	■■□□□ 1.45
MBD1-221	ENST00000589867	EVA1C	P58658	441 aa		24.1	■■□□□ 1.45
MBD1-221	ENST00000589867	ABCC6	O95255	1503 aa		24.1	■■□□□ 1.45
MBD1-221	ENST00000589867	KIF20B	Q96Q89	1820 aa		24.08	■■□□□ 1.45
MBD1-221	ENST00000589867	NSD3	Q9BZ95	1437 aa		24.08	■■□□□ 1.44
MBD1-221	ENST00000589867	GGNBP2	Q9H3C7	697 aa		24.07	■■□□□ 1.44
MBD1-221	ENST00000589867	CRB1	P82279	1406 aa		24.07	■■□□□ 1.44
MBD1-221	ENST00000589867	BARGIN	Q6ZT62	677 aa		24.06	■■□□□ 1.44
MBD1-221	ENST00000589867	USP35	Q9P2H5	1018 aa		24.06	■■□□□ 1.44
MBD1-221	ENST00000589867	COG3	Q96JB2	828 aa		24.05	■■□□□ 1.44
MBD1-221	ENST00000589867	WDR17	Q8IZU2	1322 aa		24.05	■■□□□ 1.44
MBD1-221	ENST00000589867	KRT27	Q7Z3Y8	459 aa		24.04	■■□□□ 1.44
MBD1-221	ENST00000589867	TCP11L2	Q8N4U5	519 aa		24.04	■■□□□ 1.44
MBD1-221	ENST00000589867	POLR3GL	Q9BT43	218 aa		24.04	■■□□□ 1.44
MBD1-221	ENST00000589867	MAP3K19	Q56UN5	1328 aa		24.02	■■□□□ 1.44
MBD1-221	ENST00000589867	THRAP3	Q9Y2W1	955 aa	Known RBP	24.01	■■□□□ 1.43
MBD1-221	ENST00000589867	KIF7	Q2M1P5	1343 aa		24.01	■■□□□ 1.43
MBD1-221	ENST00000589867	WNK3	Q9BYP7	1800 aa		24	■■□□□ 1.43
MBD1-221	ENST00000589867		A0A0G2JS52	829 aa		24	■■□□□ 1.43
MBD1-221	ENST00000589867	MYT1	Q01538	1121 aa		24	■■□□□ 1.43
MBD1-221	ENST00000589867	ERBB3	P21860	1342 aa		24	■■□□□ 1.43
MBD1-221	ENST00000589867	PARP4	Q9UKK3	1724 aa	Known RBP	23.99	■■□□□ 1.43
MBD1-221	ENST00000589867	FAM182B	Q5T319	152 aa		23.99	■■□□□ 1.43
MBD1-221	ENST00000589867	TOM1L2	Q6ZVM7	507 aa		23.99	■■□□□ 1.43
MBD1-221	ENST00000589867	IP6K1	Q92551	441 aa		23.99	■■□□□ 1.43
MBD1-221	ENST00000589867	PANK3	Q9H999	370 aa		23.99	■■□□□ 1.43
MBD1-221	ENST00000589867	CARD10	Q9BWT7	1032 aa		23.98	■■□□□ 1.43
MBD1-221	ENST00000589867	DISP2	A7MBM2	1401 aa		23.97	■■□□□ 1.43
MBD1-221	ENST00000589867	RRS1	Q15050	365 aa	Known RBP	23.97	■■□□□ 1.43
MBD1-221	ENST00000589867	PEAK1	Q9H792	1746 aa		23.97	■■□□□ 1.43
MBD1-221	ENST00000589867	BLM	P54132	1417 aa	Predicted RBP	23.95	■■□□□ 1.42
MBD1-221	ENST00000589867	HOXC9	P31274	260 aa		23.95	■■□□□ 1.42
MBD1-221	ENST00000589867	LRRC37A3	O60309	1634 aa		23.95	■■□□□ 1.42
MBD1-221	ENST00000589867	ANKRD24	Q8TF21	1146 aa		23.94	■■□□□ 1.42
MBD1-221	ENST00000589867	CGNL1	Q0VF96	1302 aa		23.93	■■□□□ 1.42
MBD1-221	ENST00000589867	CSB-PGBD3	P0DP91	1061 aa		23.93	■■□□□ 1.42
MBD1-221	ENST00000589867	ANKRD26	Q9UPS8	1709 aa		23.93	■■□□□ 1.42
MBD1-221	ENST00000589867	RGPD2	P0DJD1	1756 aa		23.92	■■□□□ 1.42
MBD1-221	ENST00000589867	WASHC2A	Q641Q2	1341 aa		23.9	■■□□□ 1.42
MBD1-221	ENST00000589867	RTL1	A6NKG5	1358 aa		23.9	■■□□□ 1.42
MBD1-221	ENST00000589867	CCDC7	Q96M83	1385 aa		23.9	■■□□□ 1.42
MBD1-221	ENST00000589867	CCDC125	Q86Z20	511 aa		23.89	■■□□□ 1.41
MBD1-221	ENST00000589867	MAP2	P11137	1827 aa	Known RBP	23.89	■■□□□ 1.41
MBD1-221	ENST00000589867	AMPH	P49418	695 aa		23.88	■■□□□ 1.41
MBD1-221	ENST00000589867	NLRP2	Q9NX02	1062 aa		23.88	■■□□□ 1.41
MBD1-221	ENST00000589867	EMILIN1	Q9Y6C2	1016 aa		23.88	■■□□□ 1.41
MBD1-221	ENST00000589867	FAM208A	Q9UK61	1670 aa	Known RBP	23.88	■■□□□ 1.41
MBD1-221	ENST00000589867	LTV1	Q96GA3	475 aa	Predicted RBP	23.87	■■□□□ 1.41
MBD1-221	ENST00000589867	TNS1	Q9HBL0	1735 aa	Known RBP	23.87	■■□□□ 1.41
MBD1-221	ENST00000589867	PER1	O15534	1290 aa	Predicted RBP	23.85	■■□□□ 1.41
MBD1-221	ENST00000589867	PDE3B	Q13370	1112 aa		23.85	■■□□□ 1.41
MBD1-221	ENST00000589867	HSP90AB2P	Q58FF8	381 aa		23.85	■■□□□ 1.41
MBD1-221	ENST00000589867	DEFB132	Q7Z7B7	95 aa		23.85	■■□□□ 1.41
MBD1-221	ENST00000589867	INSR	P06213	1382 aa		23.84	■■□□□ 1.41
MBD1-221	ENST00000589867	KIF24	Q5T7B8	1368 aa		23.84	■■□□□ 1.41
MBD1-221	ENST00000589867	DDB1	Q16531	1140 aa		23.84	■■□□□ 1.41
MBD1-221	ENST00000589867	AMER1	Q5JTC6	1135 aa	Predicted RBP	23.84	■■□□□ 1.41
MBD1-221	ENST00000589867	CDCA7	Q9BWT1	371 aa	Predicted RBP	23.84	■■□□□ 1.41
MBD1-221	ENST00000589867	FAM196A	Q6ZSG2	479 aa		23.83	■■□□□ 1.41
MBD1-221	ENST00000589867	MARCH10	Q8NA82	808 aa	Predicted RBP	23.83	■■□□□ 1.41
MBD1-221	ENST00000589867	POLK	Q9UBT6	870 aa		23.83	■■□□□ 1.41
MBD1-221	ENST00000589867	RGPD1	P0DJD0	1748 aa		23.83	■■□□□ 1.41
MBD1-221	ENST00000589867	FLT4	P35916	1363 aa		23.82	■■□□□ 1.4
MBD1-221	ENST00000589867	SBF2	Q86WG5	1849 aa		23.82	■■□□□ 1.4
MBD1-221	ENST00000589867	NSD2	O96028	1365 aa		23.81	■■□□□ 1.4
MBD1-221	ENST00000589867	NBPF6	Q5VWK0	638 aa		23.81	■■□□□ 1.4
MBD1-221	ENST00000589867	NBPF4	Q96M43	638 aa		23.81	■■□□□ 1.4
MBD1-221	ENST00000589867	TNS2	Q63HR2	1409 aa		23.81	■■□□□ 1.4
MBD1-221	ENST00000589867	TRIM37	O94972	964 aa		23.8	■■□□□ 1.4
MBD1-221	ENST00000589867	IL2RB	P14784	551 aa		23.79	■■□□□ 1.4
MBD1-221	ENST00000589867	TNNT2	P45379	298 aa	Predicted RBP	23.78	■■□□□ 1.4
MBD1-221	ENST00000589867	KNSTRN	Q9Y448	316 aa		23.78	■■□□□ 1.4
MBD1-221	ENST00000589867	OVOS2	A0A0G2JMS6	1433 aa		23.77	■■□□□ 1.4
MBD1-221	ENST00000589867	BCL9	O00512	1426 aa		23.77	■■□□□ 1.4
MBD1-221	ENST00000589867	SMG6	Q86US8	1419 aa	Known RBP	23.76	■■□□□ 1.39
MBD1-221	ENST00000589867	MEGF6	O75095	1541 aa		23.76	■■□□□ 1.39
MBD1-221	ENST00000589867	EXOC5	O00471	708 aa		23.76	■■□□□ 1.39
MBD1-221	ENST00000589867	PTF1A	Q7RTS3	328 aa		23.76	■■□□□ 1.39
MBD1-221	ENST00000589867	SHANK3	Q9BYB0	1731 aa		23.76	■■□□□ 1.39
MBD1-221	ENST00000589867	USHBP1	Q8N6Y0	703 aa		23.75	■■□□□ 1.39
MBD1-221	ENST00000589867	NCAPD2	Q15021	1401 aa		23.75	■■□□□ 1.39
MBD1-221	ENST00000589867	PPM1G	O15355	546 aa	Predicted RBP	23.73	■■□□□ 1.39
MBD1-221	ENST00000589867	EN1	Q05925	392 aa	Predicted RBP	23.73	■■□□□ 1.39
MBD1-221	ENST00000589867	SF3B2	Q13435	895 aa	Known RBP	23.73	■■□□□ 1.39
MBD1-221	ENST00000589867	MORC1	Q86VD1	984 aa		23.72	■■□□□ 1.39
MBD1-221	ENST00000589867	BAG6	P46379	1132 aa		23.7	■■□□□ 1.38
MBD1-221	ENST00000589867	CAMKK2	Q96RR4	588 aa		23.7	■■□□□ 1.38
MBD1-221	ENST00000589867	EIF4A2	Q14240	407 aa	Known RBP	23.69	■■□□□ 1.38
MBD1-221	ENST00000589867	EYA1	Q99502	592 aa		23.69	■■□□□ 1.38
MBD1-221	ENST00000589867	NPC1L1	Q9UHC9	1359 aa		23.68	■■□□□ 1.38
MBD1-221	ENST00000589867	EZH2	Q15910	746 aa	Known RBP	23.68	■■□□□ 1.38
MBD1-221	ENST00000589867	APBA3	O96018	575 aa		23.67	■■□□□ 1.38
MBD1-221	ENST00000589867	CC2D1B	Q5T0F9	858 aa	Known RBP	23.66	■■□□□ 1.38
MBD1-221	ENST00000589867	NHS	Q6T4R5	1651 aa		23.65	■■□□□ 1.38
MBD1-221	ENST00000589867	RREB1	Q92766	1687 aa		23.65	■■□□□ 1.38
MBD1-221	ENST00000589867	KCNQ2	O43526	872 aa		23.65	■■□□□ 1.38

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms