RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 WDR17Q8IZU2 1322 aa23.25■■□□□ 1.31
RAB3D-202ENST00000589655 ROCK2O75116 1388 aaKnown RBP23.25■■□□□ 1.31
RAB3D-202ENST00000589655 DDB1Q16531 1140 aa23.24■■□□□ 1.31
RAB3D-202ENST00000589655 RGPD3A6NKT7 1758 aaPredicted RBP23.23■■□□□ 1.31
RAB3D-202ENST00000589655 RGPD4Q7Z3J3 1758 aa23.23■■□□□ 1.31
RAB3D-202ENST00000589655 NBPF14Q5TI25 921 aa23.23■■□□□ 1.31
RAB3D-202ENST00000589655 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
RAB3D-202ENST00000589655 NFAT5O94916 1531 aa23.23■■□□□ 1.31
RAB3D-202ENST00000589655 C11orf95C9JLR9 678 aaPredicted RBP23.22■■□□□ 1.31
RAB3D-202ENST00000589655 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
RAB3D-202ENST00000589655 MARCH10Q8NA82 808 aaPredicted RBP23.22■■□□□ 1.31
RAB3D-202ENST00000589655 TTC21AQ8NDW8 1320 aa23.2■■□□□ 1.3
RAB3D-202ENST00000589655 PLSCR1O15162 318 aa23.2■■□□□ 1.3
RAB3D-202ENST00000589655 SOX12O15370 315 aa23.2■■□□□ 1.3
RAB3D-202ENST00000589655 KCNH5Q8NCM2 988 aa23.19■■□□□ 1.3
RAB3D-202ENST00000589655 BCL9O00512 1426 aa23.18■■□□□ 1.3
RAB3D-202ENST00000589655 BCL11BQ9C0K0 894 aaPredicted RBP23.18■■□□□ 1.3
RAB3D-202ENST00000589655 ANO8Q9HCE9 1232 aaPredicted RBP23.18■■□□□ 1.3
RAB3D-202ENST00000589655 MON2Q7Z3U7 1717 aa23.18■■□□□ 1.3
RAB3D-202ENST00000589655 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
RAB3D-202ENST00000589655 PROM2Q8N271 834 aa23.17■■□□□ 1.3
RAB3D-202ENST00000589655 CARD10Q9BWT7 1032 aa23.17■■□□□ 1.3
RAB3D-202ENST00000589655 CD163L1Q9NR16 1453 aa23.16■■□□□ 1.3
RAB3D-202ENST00000589655 CDCA7Q9BWT1 371 aaPredicted RBP23.15■■□□□ 1.3
RAB3D-202ENST00000589655 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.3
RAB3D-202ENST00000589655 KCNQ2O43526 872 aa23.14■■□□□ 1.29
RAB3D-202ENST00000589655 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
RAB3D-202ENST00000589655 CASZ1Q86V15 1759 aa23.14■■□□□ 1.29
RAB3D-202ENST00000589655 ABCC6O95255 1503 aa23.13■■□□□ 1.29
RAB3D-202ENST00000589655 USP54Q70EL1 1684 aa23.13■■□□□ 1.29
RAB3D-202ENST00000589655 CSB-PGBD3P0DP91 1061 aa23.13■■□□□ 1.29
RAB3D-202ENST00000589655 USP31Q70CQ4 1352 aa23.13■■□□□ 1.29
RAB3D-202ENST00000589655 PDGFDQ9GZP0 370 aaPredicted RBP23.12■■□□□ 1.29
RAB3D-202ENST00000589655 NME9Q86XW9 330 aa23.1■■□□□ 1.29
RAB3D-202ENST00000589655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.1■■□□□ 1.29
RAB3D-202ENST00000589655 CCDC7Q96M83 1385 aa23.1■■□□□ 1.29
RAB3D-202ENST00000589655 TNS2Q63HR2 1409 aa23.08■■□□□ 1.29
RAB3D-202ENST00000589655 EXOC5O00471 708 aa23.08■■□□□ 1.29
RAB3D-202ENST00000589655 PPP1R1BQ9UD71 204 aaPredicted RBP23.07■■□□□ 1.28
RAB3D-202ENST00000589655 ERBB3P21860 1342 aa23.07■■□□□ 1.28
RAB3D-202ENST00000589655 NINLQ9Y2I6 1382 aa23.06■■□□□ 1.28
RAB3D-202ENST00000589655 TXNRD1Q16881 649 aa23.06■■□□□ 1.28
RAB3D-202ENST00000589655 CARD11Q9BXL7 1154 aa23.06■■□□□ 1.28
RAB3D-202ENST00000589655 SLC12A5Q9H2X9 1139 aa23.06■■□□□ 1.28
RAB3D-202ENST00000589655 LTN1O94822 1766 aa23.06■■□□□ 1.28
RAB3D-202ENST00000589655 NHSQ6T4R5 1651 aa23.04■■□□□ 1.28
RAB3D-202ENST00000589655 ZBTB7AO95365 584 aa23.02■■□□□ 1.28
RAB3D-202ENST00000589655 TMC1Q8TDI8 760 aa23.02■■□□□ 1.28
RAB3D-202ENST00000589655 NLRP2Q9NX02 1062 aa23.02■■□□□ 1.28
RAB3D-202ENST00000589655 EDC4Q6P2E9 1401 aaKnown RBP23.01■■□□□ 1.27
RAB3D-202ENST00000589655 PTGER2P43116 358 aa23.01■■□□□ 1.27
RAB3D-202ENST00000589655 A0A1W2PP64 1363 aa23.01■■□□□ 1.27
RAB3D-202ENST00000589655 MYOM1P52179 1685 aa23■■□□□ 1.27
RAB3D-202ENST00000589655 YY1P25490 414 aa23■■□□□ 1.27
RAB3D-202ENST00000589655 SLC15A2Q16348 729 aa22.99■■□□□ 1.27
RAB3D-202ENST00000589655 HDGFL2Q7Z4V5 671 aaPredicted RBP22.99■■□□□ 1.27
RAB3D-202ENST00000589655 ANKRD24Q8TF21 1146 aa22.99■■□□□ 1.27
RAB3D-202ENST00000589655 ACSBG1Q96GR2 724 aa22.99■■□□□ 1.27
RAB3D-202ENST00000589655 IL2RBP14784 551 aa22.98■■□□□ 1.27
RAB3D-202ENST00000589655 STK32BQ9NY57 414 aa22.98■■□□□ 1.27
RAB3D-202ENST00000589655 PAPPAQ13219 1627 aa22.97■■□□□ 1.27
RAB3D-202ENST00000589655 ATF5Q9Y2D1 282 aaPredicted RBP22.97■■□□□ 1.27
RAB3D-202ENST00000589655 BTAF1O14981 1849 aa22.96■■□□□ 1.27
RAB3D-202ENST00000589655 PUS7Q96PZ0 661 aaKnown RBP22.95■■□□□ 1.26
RAB3D-202ENST00000589655 TERF2IPQ9NYB0 399 aa22.95■■□□□ 1.26
RAB3D-202ENST00000589655 TESK2Q96S53 571 aa22.94■■□□□ 1.26
RAB3D-202ENST00000589655 SGIP1Q9BQI5 828 aa22.94■■□□□ 1.26
RAB3D-202ENST00000589655 TONSLQ96HA7 1378 aa22.93■■□□□ 1.26
RAB3D-202ENST00000589655 IP6K1Q92551 441 aa22.92■■□□□ 1.26
RAB3D-202ENST00000589655 MTFR1LQ9H019 292 aa22.9■■□□□ 1.26
RAB3D-202ENST00000589655 LRRC4BQ9NT99 713 aa22.9■■□□□ 1.26
RAB3D-202ENST00000589655 ZNF827Q17R98 1081 aa22.89■■□□□ 1.25
RAB3D-202ENST00000589655 FAM208AQ9UK61 1670 aaKnown RBP22.88■■□□□ 1.25
RAB3D-202ENST00000589655 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
RAB3D-202ENST00000589655 DCAF8L1A6NGE4 600 aa22.88■■□□□ 1.25
RAB3D-202ENST00000589655 FBLN1P23142 703 aa22.88■■□□□ 1.25
RAB3D-202ENST00000589655 FHDC1Q9C0D6 1143 aaPredicted RBP22.88■■□□□ 1.25
RAB3D-202ENST00000589655 KAT6BQ8WYB5 2073 aa22.88■■□□□ 1.25
RAB3D-202ENST00000589655 LTV1Q96GA3 475 aaPredicted RBP22.87■■□□□ 1.25
RAB3D-202ENST00000589655 SYT17Q9BSW7 474 aa22.87■■□□□ 1.25
RAB3D-202ENST00000589655 MAP3K19Q56UN5 1328 aa22.86■■□□□ 1.25
RAB3D-202ENST00000589655 DDX54Q8TDD1 881 aaKnown RBP22.85■■□□□ 1.25
RAB3D-202ENST00000589655 RGPD2P0DJD1 1756 aa22.85■■□□□ 1.25
RAB3D-202ENST00000589655 HOXC9P31274 260 aa22.84■■□□□ 1.25
RAB3D-202ENST00000589655 SHANK3Q9BYB0 1731 aa22.84■■□□□ 1.25
RAB3D-202ENST00000589655 AKT1S1Q96B36 256 aa22.83■■□□□ 1.25
RAB3D-202ENST00000589655 COG3Q96JB2 828 aa22.82■■□□□ 1.24
RAB3D-202ENST00000589655 MEGF6O75095 1541 aa22.81■■□□□ 1.24
RAB3D-202ENST00000589655 DOT1LQ8TEK3 1739 aa22.8■■□□□ 1.24
RAB3D-202ENST00000589655 NSD2O96028 1365 aa22.8■■□□□ 1.24
RAB3D-202ENST00000589655 ANKRD36BQ8N2N9 1353 aa22.8■■□□□ 1.24
RAB3D-202ENST00000589655 ARXQ96QS3 562 aa22.8■■□□□ 1.24
RAB3D-202ENST00000589655 QSER1Q2KHR3 1735 aa22.79■■□□□ 1.24
RAB3D-202ENST00000589655 KCNQ4P56696 695 aa22.79■■□□□ 1.24
RAB3D-202ENST00000589655 AMPHP49418 695 aa22.78■■□□□ 1.24
RAB3D-202ENST00000589655 PRIM1P49642 420 aaKnown RBP22.78■■□□□ 1.24
RAB3D-202ENST00000589655 TUBGCP6Q96RT7 1819 aa22.78■■□□□ 1.24
RAB3D-202ENST00000589655 UTRNP46939 3433 aa22.78■■□□□ 1.24
RAB3D-202ENST00000589655 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
RAB3D-202ENST00000589655 LY75O60449 1722 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms