RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 PHLPP1O60346 1717 aa18.66■□□□□ 0.58
NLE1-205ENST00000588642 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.58
NLE1-205ENST00000588642 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
NLE1-205ENST00000588642 HSPA1LP34931 641 aa18.65■□□□□ 0.58
NLE1-205ENST00000588642 CCDC146Q8IYE0 955 aa18.65■□□□□ 0.58
NLE1-205ENST00000588642 CPDO75976 1380 aa18.65■□□□□ 0.58
NLE1-205ENST00000588642 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
NLE1-205ENST00000588642 AXIN2Q9Y2T1 843 aa18.64■□□□□ 0.57
NLE1-205ENST00000588642 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
NLE1-205ENST00000588642 NUTM2BA6NNL0 878 aaPredicted RBP18.63■□□□□ 0.57
NLE1-205ENST00000588642 NUTM2EB1AL46 878 aaPredicted RBP18.63■□□□□ 0.57
NLE1-205ENST00000588642 NUTM2AQ8IVF1 878 aaPredicted RBP18.63■□□□□ 0.57
NLE1-205ENST00000588642 PNNQ9H307 717 aaKnown RBP18.63■□□□□ 0.57
NLE1-205ENST00000588642 FCHSD2O94868 740 aa18.62■□□□□ 0.57
NLE1-205ENST00000588642 HMOX1P09601 288 aa18.62■□□□□ 0.57
NLE1-205ENST00000588642 ANKRD24Q8TF21 1146 aa18.62■□□□□ 0.57
NLE1-205ENST00000588642 JCADQ9P266 1359 aa18.62■□□□□ 0.57
NLE1-205ENST00000588642 SENP3-EIF4A1A0A087X0R7 540 aa18.61■□□□□ 0.57
NLE1-205ENST00000588642 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
NLE1-205ENST00000588642 EYA1Q99502 592 aa18.61■□□□□ 0.57
NLE1-205ENST00000588642 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
NLE1-205ENST00000588642 BLMP54132 1417 aaPredicted RBP18.6■□□□□ 0.57
NLE1-205ENST00000588642 FAM83GA6ND36 823 aa18.6■□□□□ 0.57
NLE1-205ENST00000588642 ADAMTS2O95450 1211 aa18.6■□□□□ 0.57
NLE1-205ENST00000588642 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
NLE1-205ENST00000588642 SULT6B1Q6IMI4 303 aa18.6■□□□□ 0.57
NLE1-205ENST00000588642 NEFMP07197 916 aa18.59■□□□□ 0.57
NLE1-205ENST00000588642 SHPRHQ149N8 1683 aa18.58■□□□□ 0.57
NLE1-205ENST00000588642 APAF1O14727 1248 aa18.58■□□□□ 0.56
NLE1-205ENST00000588642 PRKAR2BP31323 418 aa18.58■□□□□ 0.56
NLE1-205ENST00000588642 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.56
NLE1-205ENST00000588642 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.56
NLE1-205ENST00000588642 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
NLE1-205ENST00000588642 EVA1CP58658 441 aa18.57■□□□□ 0.56
NLE1-205ENST00000588642 NBPF6Q5VWK0 638 aa18.57■□□□□ 0.56
NLE1-205ENST00000588642 NBPF4Q96M43 638 aa18.57■□□□□ 0.56
NLE1-205ENST00000588642 NLRP2Q9NX02 1062 aa18.57■□□□□ 0.56
NLE1-205ENST00000588642 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
NLE1-205ENST00000588642 COL22A1Q8NFW1 1626 aaPredicted RBP18.56■□□□□ 0.56
NLE1-205ENST00000588642 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
NLE1-205ENST00000588642 ILDR1Q86SU0 546 aaPredicted RBP18.56■□□□□ 0.56
NLE1-205ENST00000588642 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
NLE1-205ENST00000588642 CRYBG1Q9Y4K1 1723 aa18.56■□□□□ 0.56
NLE1-205ENST00000588642 LTN1O94822 1766 aa18.55■□□□□ 0.56
NLE1-205ENST00000588642 ERBB3P21860 1342 aa18.55■□□□□ 0.56
NLE1-205ENST00000588642 TCP11L2Q8N4U5 519 aa18.55■□□□□ 0.56
NLE1-205ENST00000588642 USHBP1Q8N6Y0 703 aa18.55■□□□□ 0.56
NLE1-205ENST00000588642 SPATA31A6Q5VVP1 1343 aa18.54■□□□□ 0.56
NLE1-205ENST00000588642 BTG4Q9NY30 223 aa18.54■□□□□ 0.56
NLE1-205ENST00000588642 STRN4Q9NRL3 753 aa18.53■□□□□ 0.56
NLE1-205ENST00000588642 ABCC6O95255 1503 aa18.53■□□□□ 0.56
NLE1-205ENST00000588642 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
NLE1-205ENST00000588642 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.56
NLE1-205ENST00000588642 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.56
NLE1-205ENST00000588642 TOM1L2Q6ZVM7 507 aa18.51■□□□□ 0.55
NLE1-205ENST00000588642 ABCA3Q99758 1704 aa18.51■□□□□ 0.55
NLE1-205ENST00000588642 CAMTA1Q9Y6Y1 1673 aa18.5■□□□□ 0.55
NLE1-205ENST00000588642 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
NLE1-205ENST00000588642 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
NLE1-205ENST00000588642 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
NLE1-205ENST00000588642 KDRP35968 1356 aa18.5■□□□□ 0.55
NLE1-205ENST00000588642 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
NLE1-205ENST00000588642 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
NLE1-205ENST00000588642 COL18A1P39060 1754 aa18.49■□□□□ 0.55
NLE1-205ENST00000588642 CENPBP07199 599 aaPredicted RBP18.48■□□□□ 0.55
NLE1-205ENST00000588642 RIPK4P57078 832 aa18.48■□□□□ 0.55
NLE1-205ENST00000588642 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
NLE1-205ENST00000588642 MEX3CQ5U5Q3 659 aaKnown RBP18.48■□□□□ 0.55
NLE1-205ENST00000588642 LARP1Q6PKG0 1096 aaKnown RBP18.48■□□□□ 0.55
NLE1-205ENST00000588642 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
NLE1-205ENST00000588642 C8orf37Q96NL8 207 aa18.48■□□□□ 0.55
NLE1-205ENST00000588642 COL5A2P05997 1499 aaPredicted RBP18.47■□□□□ 0.55
NLE1-205ENST00000588642 RAPGEF4Q8WZA2 1011 aa18.46■□□□□ 0.55
NLE1-205ENST00000588642 CARD10Q9BWT7 1032 aa18.46■□□□□ 0.55
NLE1-205ENST00000588642 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
NLE1-205ENST00000588642 RGPD1P0DJD0 1748 aa18.45■□□□□ 0.54
NLE1-205ENST00000588642 COL14A1Q05707 1796 aaKnown RBP18.45■□□□□ 0.54
NLE1-205ENST00000588642 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
NLE1-205ENST00000588642 TATP17735 454 aaPredicted RBP18.44■□□□□ 0.54
NLE1-205ENST00000588642 MTHFSDQ2M296 383 aaKnown RBP18.44■□□□□ 0.54
NLE1-205ENST00000588642 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
NLE1-205ENST00000588642 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
NLE1-205ENST00000588642 CCDC27Q2M243 656 aa18.43■□□□□ 0.54
NLE1-205ENST00000588642 USP35Q9P2H5 1018 aa18.43■□□□□ 0.54
NLE1-205ENST00000588642 NCAPD2Q15021 1401 aa18.42■□□□□ 0.54
NLE1-205ENST00000588642 PDE3BQ13370 1112 aa18.42■□□□□ 0.54
NLE1-205ENST00000588642 AMOTQ4VCS5 1084 aa18.42■□□□□ 0.54
NLE1-205ENST00000588642 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
NLE1-205ENST00000588642 RGPD5Q99666 1765 aa18.41■□□□□ 0.54
NLE1-205ENST00000588642 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
NLE1-205ENST00000588642 UNC5CLQ8IV45 518 aa18.41■□□□□ 0.54
NLE1-205ENST00000588642 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
NLE1-205ENST00000588642 CCDC9Q9Y3X0 531 aaKnown RBP18.41■□□□□ 0.54
NLE1-205ENST00000588642 LRP6O75581 1613 aa18.41■□□□□ 0.54
NLE1-205ENST00000588642 CRB1P82279 1406 aa18.4■□□□□ 0.54
NLE1-205ENST00000588642 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
NLE1-205ENST00000588642 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
NLE1-205ENST00000588642 SLIT2O94813 1529 aa18.39■□□□□ 0.54
NLE1-205ENST00000588642 ZNF530Q6P9A1 599 aaPredicted RBP18.39■□□□□ 0.53
NLE1-205ENST00000588642 WDR63Q8IWG1 891 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms