RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 LTN1O94822 1766 aa14.66□□□□□ -0.06
TPM4-209ENST00000588483 RGPD5Q99666 1765 aa14.66□□□□□ -0.06
TPM4-209ENST00000588483 EVA1CP58658 441 aa14.66□□□□□ -0.06
TPM4-209ENST00000588483 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
TPM4-209ENST00000588483 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
TPM4-209ENST00000588483 AXIN2Q9Y2T1 843 aa14.66□□□□□ -0.06
TPM4-209ENST00000588483 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
TPM4-209ENST00000588483 TCP11L2Q8N4U5 519 aa14.65□□□□□ -0.06
TPM4-209ENST00000588483 WDR17Q8IZU2 1322 aa14.65□□□□□ -0.06
TPM4-209ENST00000588483 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
TPM4-209ENST00000588483 KIF20BQ96Q89 1820 aa14.63□□□□□ -0.07
TPM4-209ENST00000588483 HSPA5P11021 654 aaKnown RBP14.62□□□□□ -0.07
TPM4-209ENST00000588483 FYB1O15117 783 aa14.61□□□□□ -0.07
TPM4-209ENST00000588483 COG3Q96JB2 828 aa14.61□□□□□ -0.07
TPM4-209ENST00000588483 ERBB3P21860 1342 aa14.61□□□□□ -0.07
TPM4-209ENST00000588483 DISP2A7MBM2 1401 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 LRRC37A3O60309 1634 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 A0A0G2JS52 829 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 SOX12O15370 315 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 MYT1Q01538 1121 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 CARD10Q9BWT7 1032 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 USP35Q9P2H5 1018 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 RGPD1P0DJD0 1748 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 CCDC7Q96M83 1385 aa14.6□□□□□ -0.07
TPM4-209ENST00000588483 FAM208AQ9UK61 1670 aaKnown RBP14.59□□□□□ -0.07
TPM4-209ENST00000588483 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
TPM4-209ENST00000588483 CDCA7Q9BWT1 371 aaPredicted RBP14.59□□□□□ -0.07
TPM4-209ENST00000588483 CARD14Q9BXL6 1004 aa14.59□□□□□ -0.07
TPM4-209ENST00000588483 RTL1A6NKG5 1358 aa14.59□□□□□ -0.07
TPM4-209ENST00000588483 NSD3Q9BZ95 1437 aa14.58□□□□□ -0.07
TPM4-209ENST00000588483 TNS1Q9HBL0 1735 aaKnown RBP14.58□□□□□ -0.07
TPM4-209ENST00000588483 TOM1L2Q6ZVM7 507 aa14.58□□□□□ -0.08
TPM4-209ENST00000588483 PEAK1Q9H792 1746 aa14.58□□□□□ -0.08
TPM4-209ENST00000588483 IP6K1Q92551 441 aa14.57□□□□□ -0.08
TPM4-209ENST00000588483 BCL9O00512 1426 aa14.57□□□□□ -0.08
TPM4-209ENST00000588483 C11orf95C9JLR9 678 aaPredicted RBP14.56□□□□□ -0.08
TPM4-209ENST00000588483 FAM196AQ6ZSG2 479 aa14.56□□□□□ -0.08
TPM4-209ENST00000588483 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
TPM4-209ENST00000588483 KIF24Q5T7B8 1368 aa14.56□□□□□ -0.08
TPM4-209ENST00000588483 GGNBP2Q9H3C7 697 aa14.55□□□□□ -0.08
TPM4-209ENST00000588483 ANKRD26Q9UPS8 1709 aa14.55□□□□□ -0.08
TPM4-209ENST00000588483 CSB-PGBD3P0DP91 1061 aa14.54□□□□□ -0.08
TPM4-209ENST00000588483 PDE3BQ13370 1112 aa14.54□□□□□ -0.08
TPM4-209ENST00000588483 ANKRD24Q8TF21 1146 aa14.54□□□□□ -0.08
TPM4-209ENST00000588483 OVOS2A0A0G2JMS6 1433 aa14.54□□□□□ -0.08
TPM4-209ENST00000588483 TNS2Q63HR2 1409 aa14.53□□□□□ -0.08
TPM4-209ENST00000588483 CGNL1Q0VF96 1302 aa14.53□□□□□ -0.08
TPM4-209ENST00000588483 HOXC9P31274 260 aa14.53□□□□□ -0.08
TPM4-209ENST00000588483 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
TPM4-209ENST00000588483 FAM182BQ5T319 152 aa14.53□□□□□ -0.08
TPM4-209ENST00000588483 DDB1Q16531 1140 aa14.52□□□□□ -0.09
TPM4-209ENST00000588483 SBF2Q86WG5 1849 aa14.52□□□□□ -0.09
TPM4-209ENST00000588483 SRCAPQ6ZRS2 3230 aa14.51□□□□□ -0.09
TPM4-209ENST00000588483 NSD2O96028 1365 aa14.5□□□□□ -0.09
TPM4-209ENST00000588483 INSRP06213 1382 aa14.5□□□□□ -0.09
TPM4-209ENST00000588483 FLT4P35916 1363 aa14.5□□□□□ -0.09
TPM4-209ENST00000588483 FBLN1P23142 703 aa14.5□□□□□ -0.09
TPM4-209ENST00000588483 BAG6P46379 1132 aa14.5□□□□□ -0.09
TPM4-209ENST00000588483 DEFB132Q7Z7B7 95 aa14.5□□□□□ -0.09
TPM4-209ENST00000588483 PARD3Q8TEW0 1356 aa14.49□□□□□ -0.09
TPM4-209ENST00000588483 KIF7Q2M1P5 1343 aa14.49□□□□□ -0.09
TPM4-209ENST00000588483 AMPHP49418 695 aa14.49□□□□□ -0.09
TPM4-209ENST00000588483 RRS1Q15050 365 aaKnown RBP14.49□□□□□ -0.09
TPM4-209ENST00000588483 NLRP2Q9NX02 1062 aa14.49□□□□□ -0.09
TPM4-209ENST00000588483 RGPD3A6NKT7 1758 aaPredicted RBP14.49□□□□□ -0.09
TPM4-209ENST00000588483 RGPD4Q7Z3J3 1758 aa14.49□□□□□ -0.09
TPM4-209ENST00000588483 IL2RBP14784 551 aa14.48□□□□□ -0.09
TPM4-209ENST00000588483 MARCH10Q8NA82 808 aaPredicted RBP14.48□□□□□ -0.09
TPM4-209ENST00000588483 PANK3Q9H999 370 aa14.48□□□□□ -0.09
TPM4-209ENST00000588483 RGPD2P0DJD1 1756 aa14.47□□□□□ -0.09
TPM4-209ENST00000588483 RREB1Q92766 1687 aa14.47□□□□□ -0.09
TPM4-209ENST00000588483 EXOC5O00471 708 aa14.47□□□□□ -0.09
TPM4-209ENST00000588483 TRIM37O94972 964 aa14.47□□□□□ -0.09
TPM4-209ENST00000588483 MAP2P11137 1827 aaKnown RBP14.47□□□□□ -0.09
TPM4-209ENST00000588483 NCAPD2Q15021 1401 aa14.47□□□□□ -0.09
TPM4-209ENST00000588483 SMG6Q86US8 1419 aaKnown RBP14.47□□□□□ -0.09
TPM4-209ENST00000588483 CAMKK2Q96RR4 588 aa14.46□□□□□ -0.09
TPM4-209ENST00000588483 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
TPM4-209ENST00000588483 WASHC2AQ641Q2 1341 aa14.44□□□□□ -0.1
TPM4-209ENST00000588483 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
TPM4-209ENST00000588483 EN1Q05925 392 aaPredicted RBP14.44□□□□□ -0.1
TPM4-209ENST00000588483 HSP90AB2PQ58FF8 381 aa14.44□□□□□ -0.1
TPM4-209ENST00000588483 EMILIN1Q9Y6C2 1016 aa14.44□□□□□ -0.1
TPM4-209ENST00000588483 NHSQ6T4R5 1651 aa14.43□□□□□ -0.1
TPM4-209ENST00000588483 MEGF6O75095 1541 aa14.43□□□□□ -0.1
TPM4-209ENST00000588483 NBPF6Q5VWK0 638 aa14.43□□□□□ -0.1
TPM4-209ENST00000588483 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
TPM4-209ENST00000588483 NBPF4Q96M43 638 aa14.43□□□□□ -0.1
TPM4-209ENST00000588483 BCL11BQ9C0K0 894 aaPredicted RBP14.43□□□□□ -0.1
TPM4-209ENST00000588483 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
TPM4-209ENST00000588483 NUP188Q5SRE5 1749 aa14.43□□□□□ -0.1
TPM4-209ENST00000588483 PLSCR1O15162 318 aa14.42□□□□□ -0.1
TPM4-209ENST00000588483 APBA3O96018 575 aa14.42□□□□□ -0.1
TPM4-209ENST00000588483 PER1O15534 1290 aaPredicted RBP14.41□□□□□ -0.1
TPM4-209ENST00000588483 EZH2Q15910 746 aaKnown RBP14.41□□□□□ -0.1
TPM4-209ENST00000588483 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
TPM4-209ENST00000588483 PLEKHG2Q9H7P9 1386 aa14.41□□□□□ -0.1
TPM4-209ENST00000588483 KNSTRNQ9Y448 316 aa14.4□□□□□ -0.1
TPM4-209ENST00000588483 NPC1L1Q9UHC9 1359 aa14.39□□□□□ -0.11
TPM4-209ENST00000588483 PKD1L3Q7Z443 1732 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms