RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.7
CCDC43-203ENST00000588210 SLIT2O94813 1529 aa19.39■□□□□ 0.69
CCDC43-203ENST00000588210 USP21Q9UK80 565 aa19.39■□□□□ 0.69
CCDC43-203ENST00000588210 COL14A1Q05707 1796 aaKnown RBP19.38■□□□□ 0.69
CCDC43-203ENST00000588210 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
CCDC43-203ENST00000588210 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
CCDC43-203ENST00000588210 KNSTRNQ9Y448 316 aa19.36■□□□□ 0.69
CCDC43-203ENST00000588210 BCL9LQ86UU0 1499 aa19.36■□□□□ 0.69
CCDC43-203ENST00000588210 SOX12O15370 315 aa19.36■□□□□ 0.69
CCDC43-203ENST00000588210 UNC5CLQ8IV45 518 aa19.36■□□□□ 0.69
CCDC43-203ENST00000588210 NFAT5O94916 1531 aa19.35■□□□□ 0.69
CCDC43-203ENST00000588210 NWD2Q9ULI1 1742 aa19.35■□□□□ 0.69
CCDC43-203ENST00000588210 PLCH1Q4KWH8 1693 aa19.35■□□□□ 0.69
CCDC43-203ENST00000588210 INSRP06213 1382 aa19.35■□□□□ 0.69
CCDC43-203ENST00000588210 CHRNA2Q15822 529 aa19.35■□□□□ 0.69
CCDC43-203ENST00000588210 ARHGEF25Q86VW2 580 aa19.35■□□□□ 0.69
CCDC43-203ENST00000588210 BTG4Q9NY30 223 aa19.34■□□□□ 0.69
CCDC43-203ENST00000588210 POTEAQ6S8J7 498 aa19.34■□□□□ 0.69
CCDC43-203ENST00000588210 PER1O15534 1290 aaPredicted RBP19.33■□□□□ 0.69
CCDC43-203ENST00000588210 QTRT2Q9H974 415 aaKnown RBP19.33■□□□□ 0.69
CCDC43-203ENST00000588210 TRPC5Q9UL62 973 aaPredicted RBP19.33■□□□□ 0.69
CCDC43-203ENST00000588210 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.33■□□□□ 0.68
CCDC43-203ENST00000588210 NSD2O96028 1365 aa19.33■□□□□ 0.68
CCDC43-203ENST00000588210 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.68
CCDC43-203ENST00000588210 ZBTB7CA1YPR0 619 aa19.31■□□□□ 0.68
CCDC43-203ENST00000588210 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
CCDC43-203ENST00000588210 BLMP54132 1417 aaPredicted RBP19.3■□□□□ 0.68
CCDC43-203ENST00000588210 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
CCDC43-203ENST00000588210 ATRNO75882 1429 aa19.3■□□□□ 0.68
CCDC43-203ENST00000588210 CAMTA1Q9Y6Y1 1673 aa19.29■□□□□ 0.68
CCDC43-203ENST00000588210 NRAPQ86VF7 1730 aa19.29■□□□□ 0.68
CCDC43-203ENST00000588210 AMER1Q5JTC6 1135 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-203ENST00000588210 ABCC6O95255 1503 aa19.29■□□□□ 0.68
CCDC43-203ENST00000588210 ANKRD26Q9UPS8 1709 aa19.28■□□□□ 0.68
CCDC43-203ENST00000588210 COL18A1P39060 1754 aa19.28■□□□□ 0.68
CCDC43-203ENST00000588210 PDE3BQ13370 1112 aa19.28■□□□□ 0.68
CCDC43-203ENST00000588210 VPS72Q15906 364 aa19.28■□□□□ 0.68
CCDC43-203ENST00000588210 ERICH6Q7L0X2 663 aa19.28■□□□□ 0.68
CCDC43-203ENST00000588210 RXRBP28702 533 aa19.28■□□□□ 0.68
CCDC43-203ENST00000588210 LTN1O94822 1766 aa19.27■□□□□ 0.68
CCDC43-203ENST00000588210 EVA1CP58658 441 aa19.27■□□□□ 0.68
CCDC43-203ENST00000588210 RBM6P78332 1123 aaKnown RBP19.27■□□□□ 0.68
CCDC43-203ENST00000588210 FBLN1P23142 703 aa19.26■□□□□ 0.67
CCDC43-203ENST00000588210 GJD4Q96KN9 370 aaPredicted RBP19.26■□□□□ 0.67
CCDC43-203ENST00000588210 AXIN2Q9Y2T1 843 aa19.26■□□□□ 0.67
CCDC43-203ENST00000588210 STRN4Q9NRL3 753 aa19.26■□□□□ 0.67
CCDC43-203ENST00000588210 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
CCDC43-203ENST00000588210 MAP3K19Q56UN5 1328 aa19.25■□□□□ 0.67
CCDC43-203ENST00000588210 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
CCDC43-203ENST00000588210 COL5A2P05997 1499 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-203ENST00000588210 SENP3-EIF4A1A0A087X0R7 540 aa19.24■□□□□ 0.67
CCDC43-203ENST00000588210 RRS1Q15050 365 aaKnown RBP19.24■□□□□ 0.67
CCDC43-203ENST00000588210 MORC1Q86VD1 984 aa19.24■□□□□ 0.67
CCDC43-203ENST00000588210 IP6K1Q92551 441 aa19.24■□□□□ 0.67
CCDC43-203ENST00000588210 CCDC9Q9Y3X0 531 aaKnown RBP19.24■□□□□ 0.67
CCDC43-203ENST00000588210 AMPHP49418 695 aa19.23■□□□□ 0.67
CCDC43-203ENST00000588210 RTL1A6NKG5 1358 aa19.22■□□□□ 0.67
CCDC43-203ENST00000588210 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
CCDC43-203ENST00000588210 SPATA31A5Q5VU36 1347 aa19.22■□□□□ 0.67
CCDC43-203ENST00000588210 SPATA31A7Q8IWB4 1347 aa19.22■□□□□ 0.67
CCDC43-203ENST00000588210 HOXC9P31274 260 aa19.21■□□□□ 0.67
CCDC43-203ENST00000588210 RGPD5Q99666 1765 aa19.21■□□□□ 0.67
CCDC43-203ENST00000588210 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
CCDC43-203ENST00000588210 LARP1Q6PKG0 1096 aaKnown RBP19.21■□□□□ 0.67
CCDC43-203ENST00000588210 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
CCDC43-203ENST00000588210 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-203ENST00000588210 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
CCDC43-203ENST00000588210 TNNT2P45379 298 aaPredicted RBP19.2■□□□□ 0.66
CCDC43-203ENST00000588210 GLI3P10071 1580 aa19.2■□□□□ 0.66
CCDC43-203ENST00000588210 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
CCDC43-203ENST00000588210 CRB1P82279 1406 aa19.19■□□□□ 0.66
CCDC43-203ENST00000588210 ERBB3P21860 1342 aa19.19■□□□□ 0.66
CCDC43-203ENST00000588210 ILDR2Q71H61 639 aa19.19■□□□□ 0.66
CCDC43-203ENST00000588210 EMILIN1Q9Y6C2 1016 aa19.19■□□□□ 0.66
CCDC43-203ENST00000588210 MAP2P11137 1827 aaKnown RBP19.19■□□□□ 0.66
CCDC43-203ENST00000588210 FLT4P35916 1363 aa19.18■□□□□ 0.66
CCDC43-203ENST00000588210 CSB-PGBD3P0DP91 1061 aa19.18■□□□□ 0.66
CCDC43-203ENST00000588210 POLKQ9UBT6 870 aa19.18■□□□□ 0.66
CCDC43-203ENST00000588210 TOM1L2Q6ZVM7 507 aa19.18■□□□□ 0.66
CCDC43-203ENST00000588210 ANKRD24Q8TF21 1146 aa19.18■□□□□ 0.66
CCDC43-203ENST00000588210 ONECUT3O60422 494 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-203ENST00000588210 THRAP3Q9Y2W1 955 aaKnown RBP19.16■□□□□ 0.66
CCDC43-203ENST00000588210 PPM1GO15355 546 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-203ENST00000588210 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
CCDC43-203ENST00000588210 PEAK1Q9H792 1746 aa19.16■□□□□ 0.66
CCDC43-203ENST00000588210 TCP11L2Q8N4U5 519 aa19.15■□□□□ 0.66
CCDC43-203ENST00000588210 HSP90AB2PQ58FF8 381 aa19.15■□□□□ 0.66
CCDC43-203ENST00000588210 CARD10Q9BWT7 1032 aa19.15■□□□□ 0.66
CCDC43-203ENST00000588210 RGS12O14924 1447 aa19.14■□□□□ 0.66
CCDC43-203ENST00000588210 BARGINQ6ZT62 677 aa19.14■□□□□ 0.65
CCDC43-203ENST00000588210 FAM98CQ17RN3 349 aaKnown RBP19.13■□□□□ 0.65
CCDC43-203ENST00000588210 LTV1Q96GA3 475 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-203ENST00000588210 EXOC6Q8TAG9 804 aa19.13■□□□□ 0.65
CCDC43-203ENST00000588210 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
CCDC43-203ENST00000588210 NLRP2Q9NX02 1062 aa19.12■□□□□ 0.65
CCDC43-203ENST00000588210 FAM208AQ9UK61 1670 aaKnown RBP19.12■□□□□ 0.65
CCDC43-203ENST00000588210 SEPT12Q8IYM1 358 aa19.11■□□□□ 0.65
CCDC43-203ENST00000588210 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-203ENST00000588210 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
CCDC43-203ENST00000588210 A0A0G2JS52 829 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms