RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 BARGINQ6ZT62 677 aa13.95□□□□□ -0.18
TPM4-207ENST00000588032 NFAT5O94916 1531 aa13.95□□□□□ -0.18
TPM4-207ENST00000588032 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
TPM4-207ENST00000588032 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
TPM4-207ENST00000588032 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
TPM4-207ENST00000588032 TCP11L2Q8N4U5 519 aa13.94□□□□□ -0.18
TPM4-207ENST00000588032 AXIN2Q9Y2T1 843 aa13.94□□□□□ -0.18
TPM4-207ENST00000588032 ABCC6O95255 1503 aa13.94□□□□□ -0.18
TPM4-207ENST00000588032 CGNL1Q0VF96 1302 aa13.93□□□□□ -0.18
TPM4-207ENST00000588032 A0A0G2JS52 829 aa13.93□□□□□ -0.18
TPM4-207ENST00000588032 MYT1Q01538 1121 aa13.93□□□□□ -0.18
TPM4-207ENST00000588032 GGNBP2Q9H3C7 697 aa13.93□□□□□ -0.18
TPM4-207ENST00000588032 WDR17Q8IZU2 1322 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 MYOM1P52179 1685 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 CRB1P82279 1406 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 NSD3Q9BZ95 1437 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 TOM1L2Q6ZVM7 507 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 KRT27Q7Z3Y8 459 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.182e-8■■■■□ 22.9
TPM4-207ENST00000588032 PANK3Q9H999 370 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 USP35Q9P2H5 1018 aa13.92□□□□□ -0.18
TPM4-207ENST00000588032 CSB-PGBD3P0DP91 1061 aa13.91□□□□□ -0.18
TPM4-207ENST00000588032 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
TPM4-207ENST00000588032 IP6K1Q92551 441 aa13.91□□□□□ -0.18
TPM4-207ENST00000588032 COL18A1P39060 1754 aa13.91□□□□□ -0.18
TPM4-207ENST00000588032 KIF7Q2M1P5 1343 aa13.9□□□□□ -0.18
TPM4-207ENST00000588032 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
TPM4-207ENST00000588032 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
TPM4-207ENST00000588032 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
TPM4-207ENST00000588032 AMPHP49418 695 aa13.89□□□□□ -0.19
TPM4-207ENST00000588032 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
TPM4-207ENST00000588032 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
TPM4-207ENST00000588032 KNSTRNQ9Y448 316 aa13.88□□□□□ -0.19
TPM4-207ENST00000588032 ERBB3P21860 1342 aa13.88□□□□□ -0.19
TPM4-207ENST00000588032 KIF24Q5T7B8 1368 aa13.87□□□□□ -0.19
TPM4-207ENST00000588032 CCDC7Q96M83 1385 aa13.87□□□□□ -0.19
TPM4-207ENST00000588032 ANKRD24Q8TF21 1146 aa13.87□□□□□ -0.19
TPM4-207ENST00000588032 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
TPM4-207ENST00000588032 NSD2O96028 1365 aa13.86□□□□□ -0.19
TPM4-207ENST00000588032 HOXC9P31274 260 aa13.86□□□□□ -0.19
TPM4-207ENST00000588032 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
TPM4-207ENST00000588032 THSD7AQ9UPZ6 1657 aa13.85□□□□□ -0.19
TPM4-207ENST00000588032 FBLN1P23142 703 aa13.85□□□□□ -0.19
TPM4-207ENST00000588032 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
TPM4-207ENST00000588032 NLRP2Q9NX02 1062 aa13.85□□□□□ -0.19
TPM4-207ENST00000588032 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
TPM4-207ENST00000588032 LTN1O94822 1766 aa13.84□□□□□ -0.19
TPM4-207ENST00000588032 FAM196AQ6ZSG2 479 aa13.84□□□□□ -0.19
TPM4-207ENST00000588032 ZEB1P37275 1124 aaPredicted RBP13.83□□□□□ -0.2
TPM4-207ENST00000588032 DDB1Q16531 1140 aa13.83□□□□□ -0.2
TPM4-207ENST00000588032 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
TPM4-207ENST00000588032 FLT4P35916 1363 aa13.83□□□□□ -0.2
TPM4-207ENST00000588032 RGPD5Q99666 1765 aa13.82□□□□□ -0.2
TPM4-207ENST00000588032 PER1O15534 1290 aaPredicted RBP13.82□□□□□ -0.2
TPM4-207ENST00000588032 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
TPM4-207ENST00000588032 BRWD3Q6RI45 1802 aa13.82□□□□□ -0.2
TPM4-207ENST00000588032 INSRP06213 1382 aa13.82□□□□□ -0.2
TPM4-207ENST00000588032 EXOC5O00471 708 aa13.81□□□□□ -0.2
TPM4-207ENST00000588032 IL2RBP14784 551 aa13.81□□□□□ -0.2
TPM4-207ENST00000588032 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
TPM4-207ENST00000588032 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
TPM4-207ENST00000588032 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
TPM4-207ENST00000588032 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
TPM4-207ENST00000588032 POLKQ9UBT6 870 aa13.8□□□□□ -0.2
TPM4-207ENST00000588032 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
TPM4-207ENST00000588032 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
TPM4-207ENST00000588032 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
TPM4-207ENST00000588032 DISP2A7MBM2 1401 aa13.79□□□□□ -0.2
TPM4-207ENST00000588032 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
TPM4-207ENST00000588032 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
TPM4-207ENST00000588032 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
TPM4-207ENST00000588032 NPC1L1Q9UHC9 1359 aa13.77□□□□□ -0.21
TPM4-207ENST00000588032 FAM208AQ9UK61 1670 aaKnown RBP13.77□□□□□ -0.21
TPM4-207ENST00000588032 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
TPM4-207ENST00000588032 BAG6P46379 1132 aa13.76□□□□□ -0.21
TPM4-207ENST00000588032 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
TPM4-207ENST00000588032 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
TPM4-207ENST00000588032 OVOS2A0A0G2JMS6 1433 aa13.75□□□□□ -0.21
TPM4-207ENST00000588032 BCL9O00512 1426 aa13.75□□□□□ -0.21
TPM4-207ENST00000588032 MARCH10Q8NA82 808 aaPredicted RBP13.75□□□□□ -0.21
TPM4-207ENST00000588032 TRIM37O94972 964 aa13.74□□□□□ -0.21
TPM4-207ENST00000588032 RAPGEF4Q8WZA2 1011 aa13.74□□□□□ -0.21
TPM4-207ENST00000588032 TNS2Q63HR2 1409 aa13.73□□□□□ -0.21
TPM4-207ENST00000588032 PEAK1Q9H792 1746 aa13.73□□□□□ -0.21
TPM4-207ENST00000588032 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
TPM4-207ENST00000588032 CC2D1BQ5T0F9 858 aaKnown RBP13.73□□□□□ -0.21
TPM4-207ENST00000588032 MAP2P11137 1827 aaKnown RBP13.72□□□□□ -0.21
TPM4-207ENST00000588032 WNK3Q9BYP7 1800 aa13.72□□□□□ -0.21
TPM4-207ENST00000588032 TATP17735 454 aaPredicted RBP13.72□□□□□ -0.21
TPM4-207ENST00000588032 APBA3O96018 575 aa13.71□□□□□ -0.21
TPM4-207ENST00000588032 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.21
TPM4-207ENST00000588032 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
TPM4-207ENST00000588032 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.21
TPM4-207ENST00000588032 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
TPM4-207ENST00000588032 USHBP1Q8N6Y0 703 aa13.7□□□□□ -0.22
TPM4-207ENST00000588032 EYA1Q99502 592 aa13.7□□□□□ -0.22
TPM4-207ENST00000588032 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
TPM4-207ENST00000588032 MTHFSP49914 203 aa13.69□□□□□ -0.22
TPM4-207ENST00000588032 DDX54Q8TDD1 881 aaKnown RBP13.69□□□□□ -0.22
TPM4-207ENST00000588032 NCAPD2Q15021 1401 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms