RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 COL18A1P39060 1754 aa22.36■■□□□ 1.17
VAT1-205ENST00000587173 LRRC37A3O60309 1634 aa22.35■■□□□ 1.17
VAT1-205ENST00000587173 NBPF14Q5TI25 921 aa22.35■■□□□ 1.17
VAT1-205ENST00000587173 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
VAT1-205ENST00000587173 RREB1Q92766 1687 aa22.35■■□□□ 1.17
VAT1-205ENST00000587173 SBNO2Q9Y2G9 1366 aa22.35■■□□□ 1.17
VAT1-205ENST00000587173 AKAP12Q02952 1782 aa22.35■■□□□ 1.17
VAT1-205ENST00000587173 CSB-PGBD3P0DP91 1061 aa22.34■■□□□ 1.17
VAT1-205ENST00000587173 NFAT5O94916 1531 aa22.32■■□□□ 1.16
VAT1-205ENST00000587173 NUP188Q5SRE5 1749 aa22.32■■□□□ 1.16
VAT1-205ENST00000587173 PEAK1Q9H792 1746 aa22.32■■□□□ 1.16
VAT1-205ENST00000587173 CDCA7Q9BWT1 371 aaPredicted RBP22.32■■□□□ 1.16
VAT1-205ENST00000587173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.31■■□□□ 1.16
VAT1-205ENST00000587173 CARD10Q9BWT7 1032 aa22.31■■□□□ 1.16
VAT1-205ENST00000587173 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
VAT1-205ENST00000587173 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
VAT1-205ENST00000587173 TMC1Q8TDI8 760 aa22.29■■□□□ 1.16
VAT1-205ENST00000587173 BCL11BQ9C0K0 894 aaPredicted RBP22.28■■□□□ 1.16
VAT1-205ENST00000587173 CD163L1Q9NR16 1453 aa22.28■■□□□ 1.16
VAT1-205ENST00000587173 USP31Q70CQ4 1352 aa22.27■■□□□ 1.16
VAT1-205ENST00000587173 MON2Q7Z3U7 1717 aa22.27■■□□□ 1.16
VAT1-205ENST00000587173 NME9Q86XW9 330 aa22.27■■□□□ 1.16
VAT1-205ENST00000587173 WNK3Q9BYP7 1800 aa22.27■■□□□ 1.15
VAT1-205ENST00000587173 ABCC6O95255 1503 aa22.26■■□□□ 1.15
VAT1-205ENST00000587173 PLSCR1O15162 318 aa22.26■■□□□ 1.15
VAT1-205ENST00000587173 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
VAT1-205ENST00000587173 HDGFL2Q7Z4V5 671 aaPredicted RBP22.26■■□□□ 1.15
VAT1-205ENST00000587173 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
VAT1-205ENST00000587173 BCL9O00512 1426 aa22.25■■□□□ 1.15
VAT1-205ENST00000587173 SLC12A5Q9H2X9 1139 aa22.25■■□□□ 1.15
VAT1-205ENST00000587173 EXOC5O00471 708 aa22.24■■□□□ 1.15
VAT1-205ENST00000587173 RGPD5Q99666 1765 aa22.23■■□□□ 1.15
VAT1-205ENST00000587173 EDC4Q6P2E9 1401 aaKnown RBP22.22■■□□□ 1.15
VAT1-205ENST00000587173 RGPD3A6NKT7 1758 aaPredicted RBP22.21■■□□□ 1.15
VAT1-205ENST00000587173 RGPD4Q7Z3J3 1758 aa22.21■■□□□ 1.15
VAT1-205ENST00000587173 SPON1Q9HCB6 807 aa22.21■■□□□ 1.15
VAT1-205ENST00000587173 ANO8Q9HCE9 1232 aaPredicted RBP22.21■■□□□ 1.15
VAT1-205ENST00000587173 TERF2IPQ9NYB0 399 aa22.21■■□□□ 1.15
VAT1-205ENST00000587173 SBF2Q86WG5 1849 aa22.21■■□□□ 1.15
VAT1-205ENST00000587173 ERBB3P21860 1342 aa22.21■■□□□ 1.15
VAT1-205ENST00000587173 A0A1W2PP64 1363 aa22.21■■□□□ 1.15
VAT1-205ENST00000587173 TNS2Q63HR2 1409 aa22.21■■□□□ 1.15
VAT1-205ENST00000587173 USP54Q70EL1 1684 aa22.2■■□□□ 1.15
VAT1-205ENST00000587173 NLRP2Q9NX02 1062 aa22.2■■□□□ 1.14
VAT1-205ENST00000587173 KCNQ2O43526 872 aa22.19■■□□□ 1.14
VAT1-205ENST00000587173 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
VAT1-205ENST00000587173 PROM2Q8N271 834 aa22.18■■□□□ 1.14
VAT1-205ENST00000587173 PPP1R1BQ9UD71 204 aaPredicted RBP22.18■■□□□ 1.14
VAT1-205ENST00000587173 ANKRD24Q8TF21 1146 aa22.17■■□□□ 1.14
VAT1-205ENST00000587173 IL2RBP14784 551 aa22.15■■□□□ 1.14
VAT1-205ENST00000587173 TESK2Q96S53 571 aa22.15■■□□□ 1.14
VAT1-205ENST00000587173 ST20-MTHFSA0A0A6YYL1 179 aa22.14■■□□□ 1.13
VAT1-205ENST00000587173 TXNRD1Q16881 649 aa22.14■■□□□ 1.13
VAT1-205ENST00000587173 NINLQ9Y2I6 1382 aa22.13■■□□□ 1.13
VAT1-205ENST00000587173 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
VAT1-205ENST00000587173 ACSBG1Q96GR2 724 aa22.13■■□□□ 1.13
VAT1-205ENST00000587173 SLC24A1O60721 1099 aa22.12■■□□□ 1.13
VAT1-205ENST00000587173 LTN1O94822 1766 aa22.12■■□□□ 1.13
VAT1-205ENST00000587173 STK32BQ9NY57 414 aa22.11■■□□□ 1.13
VAT1-205ENST00000587173 IP6K1Q92551 441 aa22.1■■□□□ 1.13
VAT1-205ENST00000587173 PDGFDQ9GZP0 370 aaPredicted RBP22.1■■□□□ 1.13
VAT1-205ENST00000587173 NHSQ6T4R5 1651 aa22.08■■□□□ 1.13
VAT1-205ENST00000587173 CASZ1Q86V15 1759 aa22.08■■□□□ 1.13
VAT1-205ENST00000587173 ZBTB7AO95365 584 aa22.08■■□□□ 1.13
VAT1-205ENST00000587173 LTV1Q96GA3 475 aaPredicted RBP22.08■■□□□ 1.13
VAT1-205ENST00000587173 COG3Q96JB2 828 aa22.08■■□□□ 1.13
VAT1-205ENST00000587173 SLC15A2Q16348 729 aa22.07■■□□□ 1.12
VAT1-205ENST00000587173 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
VAT1-205ENST00000587173 ANKRD36BQ8N2N9 1353 aa22.04■■□□□ 1.12
VAT1-205ENST00000587173 HOXC9P31274 260 aa22.03■■□□□ 1.12
VAT1-205ENST00000587173 AMPHP49418 695 aa22.03■■□□□ 1.12
VAT1-205ENST00000587173 ATF5Q9Y2D1 282 aaPredicted RBP22.03■■□□□ 1.12
VAT1-205ENST00000587173 DCAF8L1A6NGE4 600 aa22.02■■□□□ 1.12
VAT1-205ENST00000587173 FBLN1P23142 703 aa22.02■■□□□ 1.12
VAT1-205ENST00000587173 PTGER2P43116 358 aa22.02■■□□□ 1.12
VAT1-205ENST00000587173 DDX54Q8TDD1 881 aaKnown RBP22.02■■□□□ 1.12
VAT1-205ENST00000587173 YY1P25490 414 aa22.01■■□□□ 1.11
VAT1-205ENST00000587173 TMF1P82094 1093 aa22.01■■□□□ 1.11
VAT1-205ENST00000587173 USP47Q96K76 1375 aa22■■□□□ 1.11
VAT1-205ENST00000587173 FAM208AQ9UK61 1670 aaKnown RBP21.99■■□□□ 1.11
VAT1-205ENST00000587173 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
VAT1-205ENST00000587173 BTAF1O14981 1849 aa21.97■■□□□ 1.11
VAT1-205ENST00000587173 RRS1Q15050 365 aaKnown RBP21.97■■□□□ 1.11
VAT1-205ENST00000587173 GGNBP2Q9H3C7 697 aa21.97■■□□□ 1.11
VAT1-205ENST00000587173 PAPPAQ13219 1627 aa21.97■■□□□ 1.11
VAT1-205ENST00000587173 MYOM1P52179 1685 aa21.97■■□□□ 1.11
VAT1-205ENST00000587173 RTL1A6NKG5 1358 aa21.97■■□□□ 1.11
VAT1-205ENST00000587173 FYB1O15117 783 aa21.96■■□□□ 1.11
VAT1-205ENST00000587173 ZNF827Q17R98 1081 aa21.96■■□□□ 1.11
VAT1-205ENST00000587173 LRRC4BQ9NT99 713 aa21.96■■□□□ 1.11
VAT1-205ENST00000587173 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
VAT1-205ENST00000587173 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
VAT1-205ENST00000587173 MEGF6O75095 1541 aa21.94■■□□□ 1.1
VAT1-205ENST00000587173 CDCA8Q53HL2 280 aa21.93■■□□□ 1.1
VAT1-205ENST00000587173 SGIP1Q9BQI5 828 aa21.93■■□□□ 1.1
VAT1-205ENST00000587173 FHDC1Q9C0D6 1143 aaPredicted RBP21.93■■□□□ 1.1
VAT1-205ENST00000587173 PRIM1P49642 420 aaKnown RBP21.92■■□□□ 1.1
VAT1-205ENST00000587173 SLC27A3Q5K4L6 730 aa21.92■■□□□ 1.1
VAT1-205ENST00000587173 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
VAT1-205ENST00000587173 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms