RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZC3H6P61129 1189 aaKnown RBP27.03■■□□□ 1.92
ATG4D-204ENST00000586417 APAF1O14727 1248 aa27.02■■□□□ 1.92
ATG4D-204ENST00000586417 ZBTB7CA1YPR0 619 aa27.01■■□□□ 1.91
ATG4D-204ENST00000586417 FKBP8Q14318 412 aa27.01■■□□□ 1.91
ATG4D-204ENST00000586417 CDCA7LQ96GN5 454 aa27■■□□□ 1.91
ATG4D-204ENST00000586417 CDK12Q9NYV4 1490 aaPredicted RBP27■■□□□ 1.91
ATG4D-204ENST00000586417 NEFLP07196 543 aa26.99■■□□□ 1.91
ATG4D-204ENST00000586417 ARHGEF25Q86VW2 580 aa26.99■■□□□ 1.91
ATG4D-204ENST00000586417 HAP1P54257 671 aaPredicted RBP26.98■■□□□ 1.91
ATG4D-204ENST00000586417 RUNDC1Q96C34 613 aa26.98■■□□□ 1.91
ATG4D-204ENST00000586417 U2AF1L5P0DN76 240 aaPredicted RBP26.97■■□□□ 1.91
ATG4D-204ENST00000586417 U2AF1Q01081 240 aaKnown RBP eCLIP26.97■■□□□ 1.91
ATG4D-204ENST00000586417 NGEFQ8N5V2 710 aa26.97■■□□□ 1.91
ATG4D-204ENST00000586417 DIAPH1O60610 1272 aaKnown RBP26.97■■□□□ 1.91
ATG4D-204ENST00000586417 KIAA0232Q92628 1395 aa26.96■■□□□ 1.91
ATG4D-204ENST00000586417 JCADQ9P266 1359 aa26.96■■□□□ 1.91
ATG4D-204ENST00000586417 AMPHP49418 695 aa26.96■■□□□ 1.91
ATG4D-204ENST00000586417 HSP90AB2PQ58FF8 381 aa26.96■■□□□ 1.91
ATG4D-204ENST00000586417 HOXC9P31274 260 aa26.94■■□□□ 1.9
ATG4D-204ENST00000586417 CHRNA2Q15822 529 aa26.94■■□□□ 1.9
ATG4D-204ENST00000586417 RGPD5Q99666 1765 aa26.92■■□□□ 1.9
ATG4D-204ENST00000586417 CPDO75976 1380 aa26.92■■□□□ 1.9
ATG4D-204ENST00000586417 FLT4P35916 1363 aa26.92■■□□□ 1.9
ATG4D-204ENST00000586417 RNF123Q5XPI4 1314 aa26.92■■□□□ 1.9
ATG4D-204ENST00000586417 NUTM2BA6NNL0 878 aaPredicted RBP26.92■■□□□ 1.9
ATG4D-204ENST00000586417 NUTM2EB1AL46 878 aaPredicted RBP26.92■■□□□ 1.9
ATG4D-204ENST00000586417 NUTM2AQ8IVF1 878 aaPredicted RBP26.92■■□□□ 1.9
ATG4D-204ENST00000586417 FBXO41Q8TF61 875 aa26.92■■□□□ 1.9
ATG4D-204ENST00000586417 U2SURPO15042 1029 aaKnown RBP26.92■■□□□ 1.9
ATG4D-204ENST00000586417 AXIN2Q9Y2T1 843 aa26.92■■□□□ 1.9
ATG4D-204ENST00000586417 COL18A1P39060 1754 aa26.91■■□□□ 1.9
ATG4D-204ENST00000586417 TCP11L2Q8N4U5 519 aa26.91■■□□□ 1.9
ATG4D-204ENST00000586417 IP6K1Q92551 441 aa26.91■■□□□ 1.9
ATG4D-204ENST00000586417 GOLGA2Q08379 1002 aa26.89■■□□□ 1.9
ATG4D-204ENST00000586417 PLEKHF1Q96S99 279 aa26.89■■□□□ 1.9
ATG4D-204ENST00000586417 PRDM11Q9NQV5 511 aa26.89■■□□□ 1.9
ATG4D-204ENST00000586417 KIF24Q5T7B8 1368 aa26.89■■□□□ 1.9
ATG4D-204ENST00000586417 PHF23Q9BUL5 403 aaPredicted RBP26.89■■□□□ 1.89
ATG4D-204ENST00000586417 RTL1A6NKG5 1358 aa26.88■■□□□ 1.89
ATG4D-204ENST00000586417 FAM83GA6ND36 823 aa26.88■■□□□ 1.89
ATG4D-204ENST00000586417 ADAMTS2O95450 1211 aa26.88■■□□□ 1.89
ATG4D-204ENST00000586417 IL13P35225 146 aa26.87■■□□□ 1.89
ATG4D-204ENST00000586417 EIF4A2Q14240 407 aaKnown RBP26.86■■□□□ 1.89
ATG4D-204ENST00000586417 NCBP3Q53F19 620 aaKnown RBP26.86■■□□□ 1.89
ATG4D-204ENST00000586417 SLFN5Q08AF3 891 aa26.86■■□□□ 1.89
ATG4D-204ENST00000586417 DUSP27Q5VZP5 1158 aa26.86■■□□□ 1.89
ATG4D-204ENST00000586417 LTV1Q96GA3 475 aaPredicted RBP26.86■■□□□ 1.89
ATG4D-204ENST00000586417 WWC1Q8IX03 1113 aa26.85■■□□□ 1.89
ATG4D-204ENST00000586417 TRMT2AQ8IZ69 625 aaKnown RBP26.85■■□□□ 1.89
ATG4D-204ENST00000586417 IRX6P78412 446 aaPredicted RBP26.84■■□□□ 1.89
ATG4D-204ENST00000586417 RRP7AQ9Y3A4 280 aaKnown RBP26.84■■□□□ 1.89
ATG4D-204ENST00000586417 LMO7Q8WWI1 1683 aa26.84■■□□□ 1.89
ATG4D-204ENST00000586417 CCDC27Q2M243 656 aa26.83■■□□□ 1.89
ATG4D-204ENST00000586417 SPINK5Q9NQ38 1064 aaPredicted RBP26.83■■□□□ 1.89
ATG4D-204ENST00000586417 LRP6O75581 1613 aa26.83■■□□□ 1.89
ATG4D-204ENST00000586417 SPATA31A6Q5VVP1 1343 aa26.83■■□□□ 1.88
ATG4D-204ENST00000586417 CAMTA1Q9Y6Y1 1673 aa26.82■■□□□ 1.88
ATG4D-204ENST00000586417 RCAN3Q9UKA8 241 aa26.82■■□□□ 1.88
ATG4D-204ENST00000586417 FCHSD2O94868 740 aa26.81■■□□□ 1.88
ATG4D-204ENST00000586417 RSPH6AQ9H0K4 717 aa26.81■■□□□ 1.88
ATG4D-204ENST00000586417 RGPD2P0DJD1 1756 aa26.8■■□□□ 1.88
ATG4D-204ENST00000586417 COL14A1Q05707 1796 aaKnown RBP26.79■■□□□ 1.88
ATG4D-204ENST00000586417 NEUROD2Q15784 382 aa26.79■■□□□ 1.88
ATG4D-204ENST00000586417 ANKRD24Q8TF21 1146 aa26.79■■□□□ 1.88
ATG4D-204ENST00000586417 ABCC6O95255 1503 aa26.79■■□□□ 1.88
ATG4D-204ENST00000586417 E9PSI1 815 aa26.79■■□□□ 1.88
ATG4D-204ENST00000586417 PNNQ9H307 717 aaKnown RBP26.79■■□□□ 1.88
ATG4D-204ENST00000586417 ERBB3P21860 1342 aa26.77■■□□□ 1.88
ATG4D-204ENST00000586417 MAPK8IP3Q9UPT6 1336 aa26.77■■□□□ 1.88
ATG4D-204ENST00000586417 RGPD1P0DJD0 1748 aa26.77■■□□□ 1.88
ATG4D-204ENST00000586417 TMPOP42166 694 aaKnown RBP26.76■■□□□ 1.88
ATG4D-204ENST00000586417 ERICH6BQ5W0A0 696 aa26.76■■□□□ 1.88
ATG4D-204ENST00000586417 BTG4Q9NY30 223 aa26.76■■□□□ 1.88
ATG4D-204ENST00000586417 PLCH1Q4KWH8 1693 aa26.76■■□□□ 1.87
ATG4D-204ENST00000586417 EYA1Q99502 592 aa26.76■■□□□ 1.87
ATG4D-204ENST00000586417 WDR63Q8IWG1 891 aa26.75■■□□□ 1.87
ATG4D-204ENST00000586417 COL5A2P05997 1499 aaPredicted RBP26.74■■□□□ 1.87
ATG4D-204ENST00000586417 PRKAR2BP31323 418 aa26.74■■□□□ 1.87
ATG4D-204ENST00000586417 NBPF6Q5VWK0 638 aa26.74■■□□□ 1.87
ATG4D-204ENST00000586417 NBPF4Q96M43 638 aa26.74■■□□□ 1.87
ATG4D-204ENST00000586417 HMOX1P09601 288 aa26.74■■□□□ 1.87
ATG4D-204ENST00000586417 C8orf37Q96NL8 207 aa26.73■■□□□ 1.87
ATG4D-204ENST00000586417 RRP1P56182 461 aaKnown RBP26.72■■□□□ 1.87
ATG4D-204ENST00000586417 AEBP1Q8IUX7 1158 aa26.72■■□□□ 1.87
ATG4D-204ENST00000586417 USHBP1Q8N6Y0 703 aa26.72■■□□□ 1.87
ATG4D-204ENST00000586417 STRN4Q9NRL3 753 aa26.72■■□□□ 1.87
ATG4D-204ENST00000586417 IGSF1Q8N6C5 1336 aa26.71■■□□□ 1.87
ATG4D-204ENST00000586417 TRIM35Q9UPQ4 493 aa26.71■■□□□ 1.87
ATG4D-204ENST00000586417 CSB-PGBD3P0DP91 1061 aa26.7■■□□□ 1.86
ATG4D-204ENST00000586417 SULT6B1Q6IMI4 303 aa26.7■■□□□ 1.86
ATG4D-204ENST00000586417 NGLY1Q96IV0 654 aa26.69■■□□□ 1.86
ATG4D-204ENST00000586417 EVA1CP58658 441 aa26.69■■□□□ 1.86
ATG4D-204ENST00000586417 LARP1Q6PKG0 1096 aaKnown RBP26.69■■□□□ 1.86
ATG4D-204ENST00000586417 PHACTR3Q96KR7 559 aa26.69■■□□□ 1.86
ATG4D-204ENST00000586417 SLIT2O94813 1529 aa26.68■■□□□ 1.86
ATG4D-204ENST00000586417 WDR17Q8IZU2 1322 aa26.68■■□□□ 1.86
ATG4D-204ENST00000586417 MEX3CQ5U5Q3 659 aaKnown RBP26.68■■□□□ 1.86
ATG4D-204ENST00000586417 NLRP2Q9NX02 1062 aa26.68■■□□□ 1.86
ATG4D-204ENST00000586417 NRAPQ86VF7 1730 aa26.67■■□□□ 1.86
ATG4D-204ENST00000586417 RIPK4P57078 832 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms