RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
BRCA1-225ENST00000586385 BCL9O00512 1426 aa17.17■□□□□ 0.34
BRCA1-225ENST00000586385 KCNQ2O43526 872 aa17.17■□□□□ 0.34
BRCA1-225ENST00000586385 C11orf95C9JLR9 678 aaPredicted RBP17.16■□□□□ 0.34
BRCA1-225ENST00000586385 SIN3AQ96ST3 1273 aa17.16■□□□□ 0.34
BRCA1-225ENST00000586385 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
BRCA1-225ENST00000586385 SPON1Q9HCB6 807 aa17.16■□□□□ 0.34
BRCA1-225ENST00000586385 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
BRCA1-225ENST00000586385 NFAT5O94916 1531 aa17.15■□□□□ 0.34
BRCA1-225ENST00000586385 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
BRCA1-225ENST00000586385 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
BRCA1-225ENST00000586385 SBF2Q86WG5 1849 aa17.14■□□□□ 0.34
BRCA1-225ENST00000586385 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
BRCA1-225ENST00000586385 SOX12O15370 315 aa17.13■□□□□ 0.33
BRCA1-225ENST00000586385 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
BRCA1-225ENST00000586385 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
BRCA1-225ENST00000586385 WNK3Q9BYP7 1800 aa17.12■□□□□ 0.33
BRCA1-225ENST00000586385 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
BRCA1-225ENST00000586385 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
BRCA1-225ENST00000586385 YY1P25490 414 aa17.11■□□□□ 0.33
BRCA1-225ENST00000586385 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
BRCA1-225ENST00000586385 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
BRCA1-225ENST00000586385 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
BRCA1-225ENST00000586385 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
BRCA1-225ENST00000586385 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
BRCA1-225ENST00000586385 AKAP12Q02952 1782 aa17.1■□□□□ 0.33
BRCA1-225ENST00000586385 PTGER2P43116 358 aa17.09■□□□□ 0.33
BRCA1-225ENST00000586385 RGPD5Q99666 1765 aa17.08■□□□□ 0.33
BRCA1-225ENST00000586385 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
BRCA1-225ENST00000586385 TXNRD1Q16881 649 aa17.08■□□□□ 0.32
BRCA1-225ENST00000586385 USP31Q70CQ4 1352 aa17.07■□□□□ 0.32
BRCA1-225ENST00000586385 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
BRCA1-225ENST00000586385 ZBTB7AO95365 584 aa17.07■□□□□ 0.32
BRCA1-225ENST00000586385 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
BRCA1-225ENST00000586385 TNS2Q63HR2 1409 aa17.06■□□□□ 0.32
BRCA1-225ENST00000586385 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
BRCA1-225ENST00000586385 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
BRCA1-225ENST00000586385 ABCC6O95255 1503 aa17.06■□□□□ 0.32
BRCA1-225ENST00000586385 EXOC5O00471 708 aa17.05■□□□□ 0.32
BRCA1-225ENST00000586385 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
BRCA1-225ENST00000586385 NME9Q86XW9 330 aa17.05■□□□□ 0.32
BRCA1-225ENST00000586385 ERBB3P21860 1342 aa17.04■□□□□ 0.32
BRCA1-225ENST00000586385 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
BRCA1-225ENST00000586385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
BRCA1-225ENST00000586385 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
BRCA1-225ENST00000586385 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
BRCA1-225ENST00000586385 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
BRCA1-225ENST00000586385 MYOM1P52179 1685 aa17.03■□□□□ 0.32
BRCA1-225ENST00000586385 USP54Q70EL1 1684 aa17.02■□□□□ 0.32
BRCA1-225ENST00000586385 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
BRCA1-225ENST00000586385 STK32BQ9NY57 414 aa17.01■□□□□ 0.31
BRCA1-225ENST00000586385 PAPPAQ13219 1627 aa17■□□□□ 0.31
BRCA1-225ENST00000586385 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
BRCA1-225ENST00000586385 NHSQ6T4R5 1651 aa17■□□□□ 0.31
BRCA1-225ENST00000586385 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
BRCA1-225ENST00000586385 NLRP2Q9NX02 1062 aa16.99■□□□□ 0.31
BRCA1-225ENST00000586385 IL2RBP14784 551 aa16.98■□□□□ 0.31
BRCA1-225ENST00000586385 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
BRCA1-225ENST00000586385 ZNF827Q17R98 1081 aa16.97■□□□□ 0.31
BRCA1-225ENST00000586385 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
BRCA1-225ENST00000586385 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
BRCA1-225ENST00000586385 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
BRCA1-225ENST00000586385 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
BRCA1-225ENST00000586385 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.3
BRCA1-225ENST00000586385 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
BRCA1-225ENST00000586385 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
BRCA1-225ENST00000586385 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
BRCA1-225ENST00000586385 LTN1O94822 1766 aa16.93■□□□□ 0.3
BRCA1-225ENST00000586385 BTAF1O14981 1849 aa16.92■□□□□ 0.3
BRCA1-225ENST00000586385 HDGFL2Q7Z4V5 671 aaPredicted RBP16.92■□□□□ 0.3
BRCA1-225ENST00000586385 ZNF784Q8NCA9 323 aaPredicted RBP16.92■□□□□ 0.3
BRCA1-225ENST00000586385 IP6K1Q92551 441 aa16.92■□□□□ 0.3
BRCA1-225ENST00000586385 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
BRCA1-225ENST00000586385 FBLN1P23142 703 aa16.91■□□□□ 0.3
BRCA1-225ENST00000586385 TESK2Q96S53 571 aa16.91■□□□□ 0.3
BRCA1-225ENST00000586385 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
BRCA1-225ENST00000586385 PUS7Q96PZ0 661 aaKnown RBP16.9■□□□□ 0.3
BRCA1-225ENST00000586385 ARXQ96QS3 562 aa16.9■□□□□ 0.3
BRCA1-225ENST00000586385 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
BRCA1-225ENST00000586385 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
BRCA1-225ENST00000586385 NSD2O96028 1365 aa16.89■□□□□ 0.29
BRCA1-225ENST00000586385 KCNQ4P56696 695 aa16.88■□□□□ 0.29
BRCA1-225ENST00000586385 DDX54Q8TDD1 881 aaKnown RBP16.88■□□□□ 0.29
BRCA1-225ENST00000586385 LTV1Q96GA3 475 aaPredicted RBP16.88■□□□□ 0.29
BRCA1-225ENST00000586385 PNPLA7Q6ZV29 1317 aa16.87■□□□□ 0.29
BRCA1-225ENST00000586385 UTRNP46939 3433 aa16.87■□□□□ 0.29
BRCA1-225ENST00000586385 FAM208AQ9UK61 1670 aaKnown RBP16.86■□□□□ 0.29
BRCA1-225ENST00000586385 HOXC9P31274 260 aa16.86■□□□□ 0.29
BRCA1-225ENST00000586385 MEGF6O75095 1541 aa16.86■□□□□ 0.29
BRCA1-225ENST00000586385 SLC27A3Q5K4L6 730 aa16.85■□□□□ 0.29
BRCA1-225ENST00000586385 ST20-MTHFSA0A0A6YYL1 179 aa16.84■□□□□ 0.29
BRCA1-225ENST00000586385 PRIM1P49642 420 aaKnown RBP16.84■□□□□ 0.29
BRCA1-225ENST00000586385 ANKRD36BQ8N2N9 1353 aa16.84■□□□□ 0.29
BRCA1-225ENST00000586385 COL24A1Q17RW2 1714 aa16.82■□□□□ 0.28
BRCA1-225ENST00000586385 SLC16A10Q8TF71 515 aa16.82■□□□□ 0.28
BRCA1-225ENST00000586385 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
BRCA1-225ENST00000586385 TONSLQ96HA7 1378 aa16.81■□□□□ 0.28
BRCA1-225ENST00000586385 COG3Q96JB2 828 aa16.81■□□□□ 0.28
BRCA1-225ENST00000586385 QSER1Q2KHR3 1735 aa16.8■□□□□ 0.28
BRCA1-225ENST00000586385 AMPHP49418 695 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms