RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-208	ENST00000585956	OVOS2	Q6IE36	1432 aa		28.15	■■■□□ 2.1
PTBP1-208	ENST00000585956	ROCK2	O75116	1388 aa	Known RBP	28.14	■■■□□ 2.1
PTBP1-208	ENST00000585956	ARHGEF25	Q86VW2	580 aa		28.14	■■■□□ 2.1
PTBP1-208	ENST00000585956	TOM1L2	Q6ZVM7	507 aa		28.13	■■■□□ 2.09
PTBP1-208	ENST00000585956	WDR17	Q8IZU2	1322 aa		28.13	■■■□□ 2.09
PTBP1-208	ENST00000585956	MARCH10	Q8NA82	808 aa	Predicted RBP	28.12	■■■□□ 2.09
PTBP1-208	ENST00000585956	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.12	■■■□□ 2.09
PTBP1-208	ENST00000585956	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.1	■■■□□ 2.09
PTBP1-208	ENST00000585956	RGPD4	Q7Z3J3	1758 aa		28.1	■■■□□ 2.09
PTBP1-208	ENST00000585956	DDB1	Q16531	1140 aa		28.1	■■■□□ 2.09
PTBP1-208	ENST00000585956	MON2	Q7Z3U7	1717 aa		28.09	■■■□□ 2.09
PTBP1-208	ENST00000585956	CD163L1	Q9NR16	1453 aa		28.08	■■■□□ 2.09
PTBP1-208	ENST00000585956	PROM2	Q8N271	834 aa		28.08	■■■□□ 2.09
PTBP1-208	ENST00000585956	PDGFD	Q9GZP0	370 aa	Predicted RBP	28.08	■■■□□ 2.09
PTBP1-208	ENST00000585956	CASZ1	Q86V15	1759 aa		28.06	■■■□□ 2.08
PTBP1-208	ENST00000585956	NBPF14	Q5TI25	921 aa		28.06	■■■□□ 2.08
PTBP1-208	ENST00000585956	KTN1	Q86UP2	1357 aa	Known RBP	28.04	■■■□□ 2.08
PTBP1-208	ENST00000585956	ZNF692	Q9BU19	519 aa	Predicted RBP	28.03	■■■□□ 2.08
PTBP1-208	ENST00000585956	UTRN	P46939	3433 aa		28.02	■■■□□ 2.08
PTBP1-208	ENST00000585956	TTC21A	Q8NDW8	1320 aa		28.02	■■■□□ 2.08
PTBP1-208	ENST00000585956	PLSCR1	O15162	318 aa		28.02	■■■□□ 2.08
PTBP1-208	ENST00000585956	CARD10	Q9BWT7	1032 aa		28.02	■■■□□ 2.08
PTBP1-208	ENST00000585956	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.02	■■■□□ 2.08
PTBP1-208	ENST00000585956	BCL9	O00512	1426 aa		28.01	■■■□□ 2.07
PTBP1-208	ENST00000585956	USP54	Q70EL1	1684 aa		28	■■■□□ 2.07
PTBP1-208	ENST00000585956	NME9	Q86XW9	330 aa		28	■■■□□ 2.07
PTBP1-208	ENST00000585956	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28	■■■□□ 2.07
PTBP1-208	ENST00000585956	KCNH5	Q8NCM2	988 aa		28	■■■□□ 2.07
PTBP1-208	ENST00000585956	SBNO2	Q9Y2G9	1366 aa		27.99	■■■□□ 2.07
PTBP1-208	ENST00000585956	CSB-PGBD3	P0DP91	1061 aa		27.99	■■■□□ 2.07
PTBP1-208	ENST00000585956	KCNQ2	O43526	872 aa		27.98	■■■□□ 2.07
PTBP1-208	ENST00000585956	LTN1	O94822	1766 aa		27.97	■■■□□ 2.07
PTBP1-208	ENST00000585956	SPON1	Q9HCB6	807 aa		27.97	■■■□□ 2.07
PTBP1-208	ENST00000585956	USP31	Q70CQ4	1352 aa		27.97	■■■□□ 2.07
PTBP1-208	ENST00000585956	TNS2	Q63HR2	1409 aa		27.95	■■■□□ 2.07
PTBP1-208	ENST00000585956	C11orf95	C9JLR9	678 aa	Predicted RBP	27.95	■■■□□ 2.06
PTBP1-208	ENST00000585956	ABCC6	O95255	1503 aa		27.94	■■■□□ 2.06
PTBP1-208	ENST00000585956	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.93	■■■□□ 2.06
PTBP1-208	ENST00000585956	SLC12A5	Q9H2X9	1139 aa		27.93	■■■□□ 2.06
PTBP1-208	ENST00000585956	MYOM1	P52179	1685 aa		27.92	■■■□□ 2.06
PTBP1-208	ENST00000585956	NHS	Q6T4R5	1651 aa		27.91	■■■□□ 2.06
PTBP1-208	ENST00000585956	TXNRD1	Q16881	649 aa		27.91	■■■□□ 2.06
PTBP1-208	ENST00000585956	ERBB3	P21860	1342 aa		27.91	■■■□□ 2.06
PTBP1-208	ENST00000585956	CCDC7	Q96M83	1385 aa		27.9	■■■□□ 2.06
PTBP1-208	ENST00000585956	EXOC5	O00471	708 aa		27.9	■■■□□ 2.06
PTBP1-208	ENST00000585956	ZBTB7A	O95365	584 aa		27.9	■■■□□ 2.06
PTBP1-208	ENST00000585956	CARD11	Q9BXL7	1154 aa		27.9	■■■□□ 2.06
PTBP1-208	ENST00000585956	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.9	■■■□□ 2.06
PTBP1-208	ENST00000585956	ACSBG1	Q96GR2	724 aa		27.89	■■■□□ 2.06
PTBP1-208	ENST00000585956		A0A1W2PP64	1363 aa		27.88	■■■□□ 2.05
PTBP1-208	ENST00000585956	PTGER2	P43116	358 aa		27.88	■■■□□ 2.05
PTBP1-208	ENST00000585956	TMC1	Q8TDI8	760 aa		27.88	■■■□□ 2.05
PTBP1-208	ENST00000585956	NLRP2	Q9NX02	1062 aa		27.86	■■■□□ 2.05
PTBP1-208	ENST00000585956	NINL	Q9Y2I6	1382 aa		27.86	■■■□□ 2.05
PTBP1-208	ENST00000585956	PAPPA	Q13219	1627 aa		27.85	■■■□□ 2.05
PTBP1-208	ENST00000585956	ATF5	Q9Y2D1	282 aa	Predicted RBP	27.85	■■■□□ 2.05
PTBP1-208	ENST00000585956	BTAF1	O14981	1849 aa		27.84	■■■□□ 2.05
PTBP1-208	ENST00000585956	ANKRD24	Q8TF21	1146 aa		27.84	■■■□□ 2.05
PTBP1-208	ENST00000585956	EDC4	Q6P2E9	1401 aa	Known RBP	27.84	■■■□□ 2.05
PTBP1-208	ENST00000585956	YY1	P25490	414 aa		27.83	■■■□□ 2.05
PTBP1-208	ENST00000585956	SLC15A2	Q16348	729 aa		27.81	■■■□□ 2.04
PTBP1-208	ENST00000585956	FBLN1	P23142	703 aa		27.8	■■■□□ 2.04
PTBP1-208	ENST00000585956	IL2RB	P14784	551 aa		27.79	■■■□□ 2.04
PTBP1-208	ENST00000585956	TESK2	Q96S53	571 aa		27.79	■■■□□ 2.04
PTBP1-208	ENST00000585956	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.78	■■■□□ 2.04
PTBP1-208	ENST00000585956	STK32B	Q9NY57	414 aa		27.78	■■■□□ 2.04
PTBP1-208	ENST00000585956	SGIP1	Q9BQI5	828 aa		27.77	■■■□□ 2.04
PTBP1-208	ENST00000585956	RGPD2	P0DJD1	1756 aa		27.76	■■■□□ 2.03
PTBP1-208	ENST00000585956	GOLGB1	Q14789	3259 aa	Known RBP	27.76	■■■□□ 2.03
PTBP1-208	ENST00000585956	ZNF827	Q17R98	1081 aa		27.76	■■■□□ 2.03
PTBP1-208	ENST00000585956	LRRC4B	Q9NT99	713 aa		27.76	■■■□□ 2.03
PTBP1-208	ENST00000585956	FAM208A	Q9UK61	1670 aa	Known RBP	27.75	■■■□□ 2.03
PTBP1-208	ENST00000585956	KAT6B	Q8WYB5	2073 aa		27.74	■■■□□ 2.03
PTBP1-208	ENST00000585956	LTV1	Q96GA3	475 aa	Predicted RBP	27.74	■■■□□ 2.03
PTBP1-208	ENST00000585956	TONSL	Q96HA7	1378 aa		27.73	■■■□□ 2.03
PTBP1-208	ENST00000585956	SHANK3	Q9BYB0	1731 aa		27.73	■■■□□ 2.03
PTBP1-208	ENST00000585956	IP6K1	Q92551	441 aa		27.72	■■■□□ 2.03
PTBP1-208	ENST00000585956	FHDC1	Q9C0D6	1143 aa	Predicted RBP	27.72	■■■□□ 2.03
PTBP1-208	ENST00000585956	ST20-MTHFS	A0A0A6YYL1	179 aa		27.71	■■■□□ 2.03
PTBP1-208	ENST00000585956	TERF2IP	Q9NYB0	399 aa		27.71	■■■□□ 2.03
PTBP1-208	ENST00000585956	MAP3K19	Q56UN5	1328 aa		27.69	■■■□□ 2.02
PTBP1-208	ENST00000585956	KCNQ4	P56696	695 aa		27.68	■■■□□ 2.02
PTBP1-208	ENST00000585956	MTFR1L	Q9H019	292 aa		27.68	■■■□□ 2.02
PTBP1-208	ENST00000585956	TUBGCP6	Q96RT7	1819 aa		27.68	■■■□□ 2.02
PTBP1-208	ENST00000585956	DDX54	Q8TDD1	881 aa	Known RBP	27.67	■■■□□ 2.02
PTBP1-208	ENST00000585956	PUS7	Q96PZ0	661 aa	Known RBP	27.67	■■■□□ 2.02
PTBP1-208	ENST00000585956	SYT17	Q9BSW7	474 aa		27.67	■■■□□ 2.02
PTBP1-208	ENST00000585956	DOT1L	Q8TEK3	1739 aa		27.67	■■■□□ 2.02
PTBP1-208	ENST00000585956	MEGF6	O75095	1541 aa		27.67	■■■□□ 2.02
PTBP1-208	ENST00000585956	HOXC9	P31274	260 aa		27.66	■■■□□ 2.02
PTBP1-208	ENST00000585956	NSD2	O96028	1365 aa		27.65	■■■□□ 2.02
PTBP1-208	ENST00000585956	AKT1S1	Q96B36	256 aa		27.63	■■■□□ 2.01
PTBP1-208	ENST00000585956	RRS1	Q15050	365 aa	Known RBP	27.6	■■■□□ 2.01
PTBP1-208	ENST00000585956	COG3	Q96JB2	828 aa		27.6	■■■□□ 2.01
PTBP1-208	ENST00000585956	LY75	O60449	1722 aa		27.59	■■■□□ 2.01
PTBP1-208	ENST00000585956	PRIM1	P49642	420 aa	Known RBP	27.59	■■■□□ 2.01
PTBP1-208	ENST00000585956	QSER1	Q2KHR3	1735 aa		27.58	■■■□□ 2.01
PTBP1-208	ENST00000585956	USHBP1	Q8N6Y0	703 aa		27.58	■■■□□ 2.01
PTBP1-208	ENST00000585956	ARX	Q96QS3	562 aa		27.58	■■■□□ 2.01
PTBP1-208	ENST00000585956	PNPLA7	Q6ZV29	1317 aa		27.58	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms