RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ZRANB1Q9UGI0 708 aa17.28■□□□□ 0.36
SS18-225ENST00000585121 CRB1P82279 1406 aa17.28■□□□□ 0.36
SS18-225ENST00000585121 AXIN2Q9Y2T1 843 aa17.27■□□□□ 0.36
SS18-225ENST00000585121 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.35
SS18-225ENST00000585121 BAG6P46379 1132 aa17.26■□□□□ 0.35
SS18-225ENST00000585121 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
SS18-225ENST00000585121 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
SS18-225ENST00000585121 WDR17Q8IZU2 1322 aa17.26■□□□□ 0.35
SS18-225ENST00000585121 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
SS18-225ENST00000585121 COG3Q96JB2 828 aa17.25■□□□□ 0.35
SS18-225ENST00000585121 ANKRD36BQ8N2N9 1353 aa17.24■□□□□ 0.35
SS18-225ENST00000585121 DEFB132Q7Z7B7 95 aa17.24■□□□□ 0.35
SS18-225ENST00000585121 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
SS18-225ENST00000585121 CDCA7Q9BWT1 371 aaPredicted RBP17.23■□□□□ 0.35
SS18-225ENST00000585121 NFAT5O94916 1531 aa17.22■□□□□ 0.35
SS18-225ENST00000585121 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
SS18-225ENST00000585121 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.34
SS18-225ENST00000585121 DDB1Q16531 1140 aa17.21■□□□□ 0.34
SS18-225ENST00000585121 TRIM37O94972 964 aa17.2■□□□□ 0.34
SS18-225ENST00000585121 ABCC6O95255 1503 aa17.2■□□□□ 0.34
SS18-225ENST00000585121 COL18A1P39060 1754 aa17.19■□□□□ 0.34
SS18-225ENST00000585121 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
SS18-225ENST00000585121 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
SS18-225ENST00000585121 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
SS18-225ENST00000585121 CCDC7Q96M83 1385 aa17.18■□□□□ 0.34
SS18-225ENST00000585121 EN1Q05925 392 aaPredicted RBP17.17■□□□□ 0.34
SS18-225ENST00000585121 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
SS18-225ENST00000585121 POLR3GLQ9BT43 218 aa17.17■□□□□ 0.34
SS18-225ENST00000585121 USP54Q70EL1 1684 aa17.17■□□□□ 0.34
SS18-225ENST00000585121 ERBB3P21860 1342 aa17.17■□□□□ 0.34
SS18-225ENST00000585121 EXOC5O00471 708 aa17.16■□□□□ 0.34
SS18-225ENST00000585121 APBA3O96018 575 aa17.16■□□□□ 0.34
SS18-225ENST00000585121 IP6K1Q92551 441 aa17.16■□□□□ 0.34
SS18-225ENST00000585121 FYB1O15117 783 aa17.16■□□□□ 0.34
SS18-225ENST00000585121 AMPHP49418 695 aa17.16■□□□□ 0.34
SS18-225ENST00000585121 HSPA5P11021 654 aaKnown RBP17.15■□□□□ 0.34
SS18-225ENST00000585121 GGNBP2Q9H3C7 697 aa17.15■□□□□ 0.34
SS18-225ENST00000585121 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
SS18-225ENST00000585121 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
SS18-225ENST00000585121 PARP4Q9UKK3 1724 aaKnown RBP17.13■□□□□ 0.33
SS18-225ENST00000585121 DISP2A7MBM2 1401 aa17.12■□□□□ 0.33
SS18-225ENST00000585121 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
SS18-225ENST00000585121 MAP3K19Q56UN5 1328 aa17.12■□□□□ 0.33
SS18-225ENST00000585121 IL2RBP14784 551 aa17.11■□□□□ 0.33
SS18-225ENST00000585121 HOXC9P31274 260 aa17.11■□□□□ 0.33
SS18-225ENST00000585121 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
SS18-225ENST00000585121 RGPD5Q99666 1765 aa17.11■□□□□ 0.33
SS18-225ENST00000585121 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
SS18-225ENST00000585121 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
SS18-225ENST00000585121 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
SS18-225ENST00000585121 FBLN1P23142 703 aa17.1■□□□□ 0.33
SS18-225ENST00000585121 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
SS18-225ENST00000585121 MARCH10Q8NA82 808 aaPredicted RBP17.1■□□□□ 0.33
SS18-225ENST00000585121 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
SS18-225ENST00000585121 CGNL1Q0VF96 1302 aa17.09■□□□□ 0.33
SS18-225ENST00000585121 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
SS18-225ENST00000585121 LTN1O94822 1766 aa17.09■□□□□ 0.33
SS18-225ENST00000585121 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
SS18-225ENST00000585121 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
SS18-225ENST00000585121 TNS2Q63HR2 1409 aa17.06■□□□□ 0.32
SS18-225ENST00000585121 BCL9O00512 1426 aa17.06■□□□□ 0.32
SS18-225ENST00000585121 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
SS18-225ENST00000585121 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
SS18-225ENST00000585121 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
SS18-225ENST00000585121 PSDA5PKW4 1024 aaPredicted RBP17.05■□□□□ 0.32
SS18-225ENST00000585121 SRCAPQ6ZRS2 3230 aa17.05■□□□□ 0.32
SS18-225ENST00000585121 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
SS18-225ENST00000585121 PLSCR1O15162 318 aa17.03■□□□□ 0.32
SS18-225ENST00000585121 R3HDM1Q15032 1099 aaKnown RBP17.03■□□□□ 0.32
SS18-225ENST00000585121 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
SS18-225ENST00000585121 FLT4P35916 1363 aa17.02■□□□□ 0.32
SS18-225ENST00000585121 MYOM1P52179 1685 aa17.02■□□□□ 0.32
SS18-225ENST00000585121 PANK3Q9H999 370 aa17.02■□□□□ 0.32
SS18-225ENST00000585121 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
SS18-225ENST00000585121 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
SS18-225ENST00000585121 INSRP06213 1382 aa17.01■□□□□ 0.31
SS18-225ENST00000585121 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
SS18-225ENST00000585121 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
SS18-225ENST00000585121 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
SS18-225ENST00000585121 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
SS18-225ENST00000585121 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
SS18-225ENST00000585121 ACSBG1Q96GR2 724 aa17■□□□□ 0.31
SS18-225ENST00000585121 NBPF4Q96M43 638 aa17■□□□□ 0.31
SS18-225ENST00000585121 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
SS18-225ENST00000585121 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
SS18-225ENST00000585121 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
SS18-225ENST00000585121 PTF1AQ7RTS3 328 aa16.98■□□□□ 0.31
SS18-225ENST00000585121 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
SS18-225ENST00000585121 KCNQ2O43526 872 aa16.97■□□□□ 0.31
SS18-225ENST00000585121 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
SS18-225ENST00000585121 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
SS18-225ENST00000585121 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
SS18-225ENST00000585121 NSD2O96028 1365 aa16.96■□□□□ 0.3
SS18-225ENST00000585121 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
SS18-225ENST00000585121 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
SS18-225ENST00000585121 SBF2Q86WG5 1849 aa16.94■□□□□ 0.3
SS18-225ENST00000585121 TXNRD1Q16881 649 aa16.94■□□□□ 0.3
SS18-225ENST00000585121 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
SS18-225ENST00000585121 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
SS18-225ENST00000585121 RREB1Q92766 1687 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms