RNA–Protein interactions for RNA: ENST00000584496.1

GRIN2C-205, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

TSL 1 (best)

Gene GRIN2C, Length 1,984 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-205ENST00000584496 ZNF428Q96B54 188 aa28.15■■■□□ 2.1
GRIN2C-205ENST00000584496 DEKP35659 375 aaKnown RBP28.15■■■□□ 2.1
GRIN2C-205ENST00000584496 HDAC1Q13547 482 aaPredicted RBP28.15■■■□□ 2.1
GRIN2C-205ENST00000584496 ZNF853P0CG23 659 aa28.14■■■□□ 2.1
GRIN2C-205ENST00000584496 TMEM57Q8N5G2 664 aa28.14■■■□□ 2.1
GRIN2C-205ENST00000584496 NALCNQ8IZF0 1738 aa28.14■■■□□ 2.09
GRIN2C-205ENST00000584496 SLIT1O75093 1534 aa28.14■■■□□ 2.09
GRIN2C-205ENST00000584496 ARHGAP23Q9P227 1491 aa28.14■■■□□ 2.09
GRIN2C-205ENST00000584496 ITPRIPQ8IWB1 547 aa28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 OVOS2A0A0J9YW53 1432 aa28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 OVOS2Q6IE36 1432 aa28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 IPO8O15397 1037 aaKnown RBP28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 SEC24BO95487 1268 aa28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 CALD1Q05682 793 aaKnown RBP28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 RTL5Q5HYW3 569 aaPredicted RBP28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 THUMPD2Q9BTF0 503 aaKnown RBP28.13■■■□□ 2.09
GRIN2C-205ENST00000584496 TTC21BQ7Z4L5 1316 aa28.12■■■□□ 2.09
GRIN2C-205ENST00000584496 PLEKHG3A1L390 1219 aa28.12■■■□□ 2.09
GRIN2C-205ENST00000584496 IFT57Q9NWB7 429 aa28.12■■■□□ 2.09
GRIN2C-205ENST00000584496 SLC4A3P48751 1232 aa28.11■■■□□ 2.09
GRIN2C-205ENST00000584496 ZBTB40Q9NUA8 1239 aa28.11■■■□□ 2.09
GRIN2C-205ENST00000584496 ACEP12821 1306 aa28.1■■■□□ 2.09
GRIN2C-205ENST00000584496 VAMP4O75379 141 aa28.1■■■□□ 2.09
GRIN2C-205ENST00000584496 GNAI1P63096 354 aa28.1■■■□□ 2.09
GRIN2C-205ENST00000584496 USP6P35125 1406 aa28.09■■■□□ 2.09
GRIN2C-205ENST00000584496 CEBPAP49715 358 aaPredicted RBP28.09■■■□□ 2.09
GRIN2C-205ENST00000584496 PEAK1Q9H792 1746 aa28.08■■■□□ 2.09
GRIN2C-205ENST00000584496 USP35Q9P2H5 1018 aa28.08■■■□□ 2.09
GRIN2C-205ENST00000584496 SSH2Q76I76 1423 aa28.07■■■□□ 2.08
GRIN2C-205ENST00000584496 PTCH1Q13635 1447 aa28.07■■■□□ 2.08
GRIN2C-205ENST00000584496 MRPL50Q8N5N7 158 aaKnown RBP28.06■■■□□ 2.08
GRIN2C-205ENST00000584496 MBIPQ9NS73 344 aa28.06■■■□□ 2.08
GRIN2C-205ENST00000584496 PIK3R4Q99570 1358 aa28.06■■■□□ 2.08
GRIN2C-205ENST00000584496 LMOD3Q0VAK6 560 aa28.06■■■□□ 2.08
GRIN2C-205ENST00000584496 RGPD1P0DJD0 1748 aa28.05■■■□□ 2.08
GRIN2C-205ENST00000584496 SMC5Q8IY18 1101 aa28.05■■■□□ 2.08
GRIN2C-205ENST00000584496 TSPYL6Q8N831 410 aa28.05■■■□□ 2.08
GRIN2C-205ENST00000584496 USP31Q70CQ4 1352 aa28.04■■■□□ 2.08
GRIN2C-205ENST00000584496 SLC26A8Q96RN1 970 aa28.04■■■□□ 2.08
GRIN2C-205ENST00000584496 EIF4A2Q14240 407 aaKnown RBP28.03■■■□□ 2.08
GRIN2C-205ENST00000584496 ARHGAP45Q92619 1136 aa28.03■■■□□ 2.08
GRIN2C-205ENST00000584496 CFAP44Q96MT7 982 aa28.03■■■□□ 2.08
GRIN2C-205ENST00000584496 FER1L4A9Z1Z3 1794 aa28.03■■■□□ 2.08
GRIN2C-205ENST00000584496 DAXXQ9UER7 740 aaPredicted RBP28.02■■■□□ 2.08
GRIN2C-205ENST00000584496 EID1Q9Y6B2 187 aa28.02■■■□□ 2.08
GRIN2C-205ENST00000584496 DIP2AQ14689 1571 aa28.01■■■□□ 2.07
GRIN2C-205ENST00000584496 TBX22Q9Y458 520 aa28■■■□□ 2.07
GRIN2C-205ENST00000584496 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
GRIN2C-205ENST00000584496 AEBP1Q8IUX7 1158 aa27.99■■■□□ 2.07
GRIN2C-205ENST00000584496 NUTM2FA1L443 756 aa27.98■■■□□ 2.07
GRIN2C-205ENST00000584496 FAM83GA6ND36 823 aa27.98■■■□□ 2.07
GRIN2C-205ENST00000584496 XRN1Q8IZH2 1706 aaKnown RBP27.97■■■□□ 2.07
GRIN2C-205ENST00000584496 RIMS1Q86UR5 1692 aaKnown RBP27.97■■■□□ 2.07
GRIN2C-205ENST00000584496 C8orf58Q8NAV2 365 aa27.97■■■□□ 2.07
GRIN2C-205ENST00000584496 ABCC4O15439 1325 aa27.96■■■□□ 2.07
GRIN2C-205ENST00000584496 TWISTNBQ3B726 338 aaPredicted RBP27.96■■■□□ 2.07
GRIN2C-205ENST00000584496 ZBTB7BO15156 539 aaPredicted RBP27.95■■■□□ 2.07
GRIN2C-205ENST00000584496 TBC1D32Q96NH3 1257 aa27.95■■■□□ 2.07
GRIN2C-205ENST00000584496 FMN2Q9NZ56 1722 aa27.95■■■□□ 2.07
GRIN2C-205ENST00000584496 SULT6B1Q6IMI4 303 aa27.95■■■□□ 2.06
GRIN2C-205ENST00000584496 RGPD8O14715 1765 aaPredicted RBP27.94■■■□□ 2.06
GRIN2C-205ENST00000584496 DCTN1Q14203 1278 aa27.94■■■□□ 2.06
GRIN2C-205ENST00000584496 TTC21AQ8NDW8 1320 aa27.94■■■□□ 2.06
GRIN2C-205ENST00000584496 ELL2O00472 640 aaPredicted RBP27.93■■■□□ 2.06
GRIN2C-205ENST00000584496 NUCB1Q02818 461 aa27.92■■■□□ 2.06
GRIN2C-205ENST00000584496 HSP90AB2PQ58FF8 381 aa27.92■■■□□ 2.06
GRIN2C-205ENST00000584496 NFKBIBQ15653 356 aa27.91■■■□□ 2.06
GRIN2C-205ENST00000584496 PIK3C2AO00443 1686 aa27.89■■■□□ 2.06
GRIN2C-205ENST00000584496 THEMISQ8N1K5 641 aaPredicted RBP27.89■■■□□ 2.06
GRIN2C-205ENST00000584496 CHMP4BQ9H444 224 aaKnown RBP27.89■■■□□ 2.06
GRIN2C-205ENST00000584496 UPF2Q9HAU5 1272 aaKnown RBP27.89■■■□□ 2.06
GRIN2C-205ENST00000584496 ARHGEF10O15013 1369 aa27.88■■■□□ 2.05
GRIN2C-205ENST00000584496 MAP3K19Q56UN5 1328 aa27.86■■■□□ 2.05
GRIN2C-205ENST00000584496 CHL1O00533 1208 aa27.86■■■□□ 2.05
GRIN2C-205ENST00000584496 PLPPR3Q6T4P5 718 aa27.85■■■□□ 2.05
GRIN2C-205ENST00000584496 API5Q9BZZ5 524 aaKnown RBP27.85■■■□□ 2.05
GRIN2C-205ENST00000584496 KIF24Q5T7B8 1368 aa27.85■■■□□ 2.05
GRIN2C-205ENST00000584496 BECN1Q14457 450 aa27.84■■■□□ 2.05
GRIN2C-205ENST00000584496 SBNO1A3KN83 1393 aa27.84■■■□□ 2.05
GRIN2C-205ENST00000584496 MARF1Q9Y4F3 1742 aaKnown RBP27.84■■■□□ 2.05
GRIN2C-205ENST00000584496 CHD1LQ86WJ1 897 aa27.84■■■□□ 2.05
GRIN2C-205ENST00000584496 CRB1P82279 1406 aa27.84■■■□□ 2.05
GRIN2C-205ENST00000584496 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
GRIN2C-205ENST00000584496 FLT4P35916 1363 aa27.83■■■□□ 2.05
GRIN2C-205ENST00000584496 KIAA0232Q92628 1395 aa27.83■■■□□ 2.05
GRIN2C-205ENST00000584496 USP54Q70EL1 1684 aa27.82■■■□□ 2.04
GRIN2C-205ENST00000584496 SIRT2Q8IXJ6 389 aa27.82■■■□□ 2.04
GRIN2C-205ENST00000584496 KDRP35968 1356 aa27.81■■■□□ 2.04
GRIN2C-205ENST00000584496 MCM10Q7L590 875 aa27.81■■■□□ 2.04
GRIN2C-205ENST00000584496 GCC1Q96CN9 775 aa27.81■■■□□ 2.04
GRIN2C-205ENST00000584496 BCL11AQ9H165 835 aa27.81■■■□□ 2.04
GRIN2C-205ENST00000584496 C1orf115Q9H7X2 142 aa27.81■■■□□ 2.04
GRIN2C-205ENST00000584496 RGS12O14924 1447 aa27.81■■■□□ 2.04
GRIN2C-205ENST00000584496 LNPKQ9C0E8 428 aa27.8■■■□□ 2.04
GRIN2C-205ENST00000584496 NGDNQ8NEJ9 315 aaKnown RBP27.8■■■□□ 2.04
GRIN2C-205ENST00000584496 SOX12O15370 315 aa27.79■■■□□ 2.04
GRIN2C-205ENST00000584496 CEP170BQ9Y4F5 1589 aaPredicted RBP27.79■■■□□ 2.04
GRIN2C-205ENST00000584496 KRT24Q2M2I5 525 aa27.79■■■□□ 2.04
GRIN2C-205ENST00000584496 INTS3Q68E01 1043 aaKnown RBP27.76■■■□□ 2.03
GRIN2C-205ENST00000584496 TBC1D2Q9BYX2 928 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms