RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
CCDC47-206ENST00000584112 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
CCDC47-206ENST00000584112 ARHGEF28Q8N1W1 1705 aaKnown RBP16.41■□□□□ 0.22
CCDC47-206ENST00000584112 ADGRF5Q8IZF2 1346 aa16.4■□□□□ 0.22
CCDC47-206ENST00000584112 PHRF1Q9P1Y6 1649 aaKnown RBP16.38■□□□□ 0.21
CCDC47-206ENST00000584112 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
CCDC47-206ENST00000584112 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
CCDC47-206ENST00000584112 MARCH10Q8NA82 808 aaPredicted RBP16.37■□□□□ 0.21
CCDC47-206ENST00000584112 THRAP3Q9Y2W1 955 aaKnown RBP16.37■□□□□ 0.21
CCDC47-206ENST00000584112 NMRK2Q9NPI5 230 aa16.36■□□□□ 0.21
CCDC47-206ENST00000584112 DDB1Q16531 1140 aa16.35■□□□□ 0.21
CCDC47-206ENST00000584112 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
CCDC47-206ENST00000584112 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
CCDC47-206ENST00000584112 AKAP12Q02952 1782 aa16.33■□□□□ 0.21
CCDC47-206ENST00000584112 NUTM2GQ5VZR2 741 aa16.33■□□□□ 0.2
CCDC47-206ENST00000584112 SLC16A10Q8TF71 515 aa16.33■□□□□ 0.2
CCDC47-206ENST00000584112 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
CCDC47-206ENST00000584112 TULP4Q9NRJ4 1543 aa16.33■□□□□ 0.2
CCDC47-206ENST00000584112 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
CCDC47-206ENST00000584112 TUBGCP6Q96RT7 1819 aa16.32■□□□□ 0.2
CCDC47-206ENST00000584112 YTHDC2Q9H6S0 1430 aaKnown RBP16.32■□□□□ 0.2
CCDC47-206ENST00000584112 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
CCDC47-206ENST00000584112 RBM46Q8TBY0 533 aaKnown RBP16.31■□□□□ 0.2
CCDC47-206ENST00000584112 SAFB2Q14151 953 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC47-206ENST00000584112 LRRC4BQ9NT99 713 aa16.3■□□□□ 0.2
CCDC47-206ENST00000584112 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
CCDC47-206ENST00000584112 KIAA1210Q9ULL0 1709 aa16.29■□□□□ 0.2
CCDC47-206ENST00000584112 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
CCDC47-206ENST00000584112 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
CCDC47-206ENST00000584112 BCL9O00512 1426 aa16.28■□□□□ 0.2
CCDC47-206ENST00000584112 MLLT1Q03111 559 aaPredicted RBP16.26■□□□□ 0.19
CCDC47-206ENST00000584112 SIRT1Q96EB6 747 aa16.26■□□□□ 0.19
CCDC47-206ENST00000584112 COL5A2P05997 1499 aaPredicted RBP16.26■□□□□ 0.19
CCDC47-206ENST00000584112 WNK3Q9BYP7 1800 aa16.25■□□□□ 0.19
CCDC47-206ENST00000584112 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
CCDC47-206ENST00000584112 CRB1P82279 1406 aa16.25■□□□□ 0.19
CCDC47-206ENST00000584112 ANKARQ7Z5J8 1434 aa16.25■□□□□ 0.19
CCDC47-206ENST00000584112 FSTL1Q12841 308 aa16.24■□□□□ 0.19
CCDC47-206ENST00000584112 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
CCDC47-206ENST00000584112 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
CCDC47-206ENST00000584112 STAC3Q96MF2 364 aa16.24■□□□□ 0.19
CCDC47-206ENST00000584112 TNRC18O15417 2968 aaPredicted RBP16.23■□□□□ 0.19
CCDC47-206ENST00000584112 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
CCDC47-206ENST00000584112 C16orf71Q8IYS4 520 aaPredicted RBP16.23■□□□□ 0.19
CCDC47-206ENST00000584112 NHSQ6T4R5 1651 aa16.23■□□□□ 0.19
CCDC47-206ENST00000584112 ADGRB1O14514 1584 aa16.22■□□□□ 0.19
CCDC47-206ENST00000584112 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
CCDC47-206ENST00000584112 BTAF1O14981 1849 aa16.22■□□□□ 0.19
CCDC47-206ENST00000584112 PDE4DIPQ5VU43 2346 aa16.21■□□□□ 0.19
CCDC47-206ENST00000584112 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
CCDC47-206ENST00000584112 FOXN1O15353 648 aa16.2■□□□□ 0.18
CCDC47-206ENST00000584112 DCAF11Q8TEB1 546 aa16.2■□□□□ 0.18
CCDC47-206ENST00000584112 ABHD8Q96I13 439 aa16.2■□□□□ 0.18
CCDC47-206ENST00000584112 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
CCDC47-206ENST00000584112 USP19O94966 1318 aa16.19■□□□□ 0.18
CCDC47-206ENST00000584112 KCNQ4P56696 695 aa16.19■□□□□ 0.18
CCDC47-206ENST00000584112 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
CCDC47-206ENST00000584112 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
CCDC47-206ENST00000584112 CPDO75976 1380 aa16.18■□□□□ 0.18
CCDC47-206ENST00000584112 ZBTB7CA1YPR0 619 aa16.18■□□□□ 0.18
CCDC47-206ENST00000584112 PRAM1Q96QH2 718 aa16.18■□□□□ 0.18
CCDC47-206ENST00000584112 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
CCDC47-206ENST00000584112 POGKQ9P215 609 aa16.18■□□□□ 0.18
CCDC47-206ENST00000584112 KDM2AQ9Y2K7 1162 aa16.18■□□□□ 0.18
CCDC47-206ENST00000584112 ITSN1Q15811 1721 aa16.17■□□□□ 0.18
CCDC47-206ENST00000584112 MSH5O43196 834 aa16.17■□□□□ 0.18
CCDC47-206ENST00000584112 TOM1L2Q6ZVM7 507 aa16.16■□□□□ 0.18
CCDC47-206ENST00000584112 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
CCDC47-206ENST00000584112 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
CCDC47-206ENST00000584112 BRD4O60885 1362 aaPredicted RBP16.14■□□□□ 0.17
CCDC47-206ENST00000584112 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
CCDC47-206ENST00000584112 USP6P35125 1406 aa16.13■□□□□ 0.17
CCDC47-206ENST00000584112 RGS19P49795 217 aa16.13■□□□□ 0.17
CCDC47-206ENST00000584112 COL23A1Q86Y22 540 aaPredicted RBP16.13■□□□□ 0.17
CCDC47-206ENST00000584112 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
CCDC47-206ENST00000584112 CCDC85CA6NKD9 419 aa16.11■□□□□ 0.17
CCDC47-206ENST00000584112 EXOC5O00471 708 aa16.1■□□□□ 0.17
CCDC47-206ENST00000584112 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
CCDC47-206ENST00000584112 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
CCDC47-206ENST00000584112 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
CCDC47-206ENST00000584112 MINK1Q8N4C8 1332 aaPredicted RBP16.09■□□□□ 0.17
CCDC47-206ENST00000584112 GCP02774 474 aa16.07■□□□□ 0.16
CCDC47-206ENST00000584112 CDCA7Q9BWT1 371 aaPredicted RBP16.07■□□□□ 0.16
CCDC47-206ENST00000584112 TRPM1Q7Z4N2 1603 aa16.06■□□□□ 0.16
CCDC47-206ENST00000584112 WASLO00401 505 aaPredicted RBP16.06■□□□□ 0.16
CCDC47-206ENST00000584112 LBX1P52954 281 aa16.06■□□□□ 0.16
CCDC47-206ENST00000584112 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
CCDC47-206ENST00000584112 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
CCDC47-206ENST00000584112 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
CCDC47-206ENST00000584112 CTCFP49711 727 aaPredicted RBP16.05■□□□□ 0.16
CCDC47-206ENST00000584112 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
CCDC47-206ENST00000584112 AXIN2Q9Y2T1 843 aa16.04■□□□□ 0.16
CCDC47-206ENST00000584112 PIK3C2AO00443 1686 aa16.04■□□□□ 0.16
CCDC47-206ENST00000584112 QRICH2Q9H0J4 1663 aa16.04■□□□□ 0.16
CCDC47-206ENST00000584112 ARHGAP27Q6ZUM4 889 aa16.03■□□□□ 0.16
CCDC47-206ENST00000584112 COL18A1P39060 1754 aa16.03■□□□□ 0.16
CCDC47-206ENST00000584112 RGPD5Q99666 1765 aa16.03■□□□□ 0.16
CCDC47-206ENST00000584112 C9orf131Q5VYM1 1079 aa16.02■□□□□ 0.16
CCDC47-206ENST00000584112 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.15
CCDC47-206ENST00000584112 C10orf71Q711Q0 1435 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms