RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ANKRD36BQ8N2N9 1353 aa28.5■■■□□ 2.15
SS18-224ENST00000584083 AXIN2Q9Y2T1 843 aa28.49■■■□□ 2.15
SS18-224ENST00000584083 BARGINQ6ZT62 677 aa28.48■■■□□ 2.15
SS18-224ENST00000584083 BLMP54132 1417 aaPredicted RBP28.47■■■□□ 2.15
SS18-224ENST00000584083 CRB1P82279 1406 aa28.47■■■□□ 2.15
SS18-224ENST00000584083 TOM1L2Q6ZVM7 507 aa28.46■■■□□ 2.15
SS18-224ENST00000584083 THRAP3Q9Y2W1 955 aaKnown RBP28.46■■■□□ 2.15
SS18-224ENST00000584083 EIF4G2P78344 907 aaKnown RBP eCLIP28.45■■■□□ 2.14
SS18-224ENST00000584083 SF3B2Q13435 895 aaKnown RBP28.45■■■□□ 2.14
SS18-224ENST00000584083 FAM182BQ5T319 152 aa28.45■■■□□ 2.14
SS18-224ENST00000584083 LTN1O94822 1766 aa28.45■■■□□ 2.14
SS18-224ENST00000584083 CSB-PGBD3P0DP91 1061 aa28.43■■■□□ 2.14
SS18-224ENST00000584083 OVOS2A0A0J9YW53 1432 aa28.43■■■□□ 2.14
SS18-224ENST00000584083 OVOS2Q6IE36 1432 aa28.43■■■□□ 2.14
SS18-224ENST00000584083 WDR17Q8IZU2 1322 aa28.43■■■□□ 2.14
SS18-224ENST00000584083 COG3Q96JB2 828 aa28.42■■■□□ 2.14
SS18-224ENST00000584083 PDE3BQ13370 1112 aa28.41■■■□□ 2.14
SS18-224ENST00000584083 HSPA5P11021 654 aaKnown RBP28.4■■■□□ 2.14
SS18-224ENST00000584083 POLR3GLQ9BT43 218 aa28.4■■■□□ 2.14
SS18-224ENST00000584083 ABCC6O95255 1503 aa28.39■■■□□ 2.14
SS18-224ENST00000584083 MYOM1P52179 1685 aa28.38■■■□□ 2.13
SS18-224ENST00000584083 PARP4Q9UKK3 1724 aaKnown RBP28.36■■■□□ 2.13
SS18-224ENST00000584083 DEFB132Q7Z7B7 95 aa28.36■■■□□ 2.13
SS18-224ENST00000584083 FAM196AQ6ZSG2 479 aa28.35■■■□□ 2.13
SS18-224ENST00000584083 CARD10Q9BWT7 1032 aa28.35■■■□□ 2.13
SS18-224ENST00000584083 FYB1O15117 783 aa28.34■■■□□ 2.13
SS18-224ENST00000584083 GGNBP2Q9H3C7 697 aa28.34■■■□□ 2.13
SS18-224ENST00000584083 RGPD1P0DJD0 1748 aa28.33■■■□□ 2.13
SS18-224ENST00000584083 KIF20BQ96Q89 1820 aa28.33■■■□□ 2.13
SS18-224ENST00000584083 WNK3Q9BYP7 1800 aa28.32■■■□□ 2.12
SS18-224ENST00000584083 BAG6P46379 1132 aa28.31■■■□□ 2.12
SS18-224ENST00000584083 CARD14Q9BXL6 1004 aa28.31■■■□□ 2.12
SS18-224ENST00000584083 ERBB3P21860 1342 aa28.3■■■□□ 2.12
SS18-224ENST00000584083 DDB1Q16531 1140 aa28.3■■■□□ 2.12
SS18-224ENST00000584083 ANKRD24Q8TF21 1146 aa28.3■■■□□ 2.12
SS18-224ENST00000584083 CDCA7Q9BWT1 371 aaPredicted RBP28.3■■■□□ 2.12
SS18-224ENST00000584083 NLRP2Q9NX02 1062 aa28.3■■■□□ 2.12
SS18-224ENST00000584083 FBLN1P23142 703 aa28.29■■■□□ 2.12
SS18-224ENST00000584083 IP6K1Q92551 441 aa28.29■■■□□ 2.12
SS18-224ENST00000584083 NSD3Q9BZ95 1437 aa28.28■■■□□ 2.12
SS18-224ENST00000584083 CCDC7Q96M83 1385 aa28.28■■■□□ 2.12
SS18-224ENST00000584083 TRIM37O94972 964 aa28.28■■■□□ 2.12
SS18-224ENST00000584083 LRRC37A3O60309 1634 aa28.28■■■□□ 2.12
SS18-224ENST00000584083 MAP3K19Q56UN5 1328 aa28.27■■■□□ 2.12
SS18-224ENST00000584083 AMPHP49418 695 aa28.27■■■□□ 2.12
SS18-224ENST00000584083 LTV1Q96GA3 475 aaPredicted RBP28.25■■■□□ 2.11
SS18-224ENST00000584083 TNS1Q9HBL0 1735 aaKnown RBP28.25■■■□□ 2.11
SS18-224ENST00000584083 HOXC9P31274 260 aa28.22■■■□□ 2.11
SS18-224ENST00000584083 EN1Q05925 392 aaPredicted RBP28.22■■■□□ 2.11
SS18-224ENST00000584083 RRS1Q15050 365 aaKnown RBP28.22■■■□□ 2.11
SS18-224ENST00000584083 DISP2A7MBM2 1401 aa28.21■■■□□ 2.11
SS18-224ENST00000584083 C11orf95C9JLR9 678 aaPredicted RBP28.21■■■□□ 2.11
SS18-224ENST00000584083 EXOC5O00471 708 aa28.21■■■□□ 2.11
SS18-224ENST00000584083 OVOS2A0A0G2JMS6 1433 aa28.2■■■□□ 2.11
SS18-224ENST00000584083 FAM208AQ9UK61 1670 aaKnown RBP28.19■■■□□ 2.1
SS18-224ENST00000584083 CGNL1Q0VF96 1302 aa28.19■■■□□ 2.1
SS18-224ENST00000584083 APBA3O96018 575 aa28.19■■■□□ 2.1
SS18-224ENST00000584083 PEAK1Q9H792 1746 aa28.18■■■□□ 2.1
SS18-224ENST00000584083 RTL1A6NKG5 1358 aa28.17■■■□□ 2.1
SS18-224ENST00000584083 IL2RBP14784 551 aa28.17■■■□□ 2.1
SS18-224ENST00000584083 MARCH10Q8NA82 808 aaPredicted RBP28.17■■■□□ 2.1
SS18-224ENST00000584083 PANK3Q9H999 370 aa28.16■■■□□ 2.1
SS18-224ENST00000584083 SBF2Q86WG5 1849 aa28.15■■■□□ 2.1
SS18-224ENST00000584083 RGPD2P0DJD1 1756 aa28.14■■■□□ 2.1
SS18-224ENST00000584083 TNS2Q63HR2 1409 aa28.13■■■□□ 2.09
SS18-224ENST00000584083 EZH2Q15910 746 aaKnown RBP28.13■■■□□ 2.09
SS18-224ENST00000584083 CAMKK2Q96RR4 588 aa28.1■■■□□ 2.09
SS18-224ENST00000584083 SMG6Q86US8 1419 aaKnown RBP28.09■■■□□ 2.09
SS18-224ENST00000584083 MAP2P11137 1827 aaKnown RBP28.09■■■□□ 2.09
SS18-224ENST00000584083 PPM1GO15355 546 aaPredicted RBP28.09■■■□□ 2.09
SS18-224ENST00000584083 HSP90AB2PQ58FF8 381 aa28.09■■■□□ 2.09
SS18-224ENST00000584083 FLT4P35916 1363 aa28.09■■■□□ 2.09
SS18-224ENST00000584083 ANKRD26Q9UPS8 1709 aa28.09■■■□□ 2.09
SS18-224ENST00000584083 EMILIN1Q9Y6C2 1016 aa28.08■■■□□ 2.09
SS18-224ENST00000584083 KIF24Q5T7B8 1368 aa28.08■■■□□ 2.09
SS18-224ENST00000584083 INSRP06213 1382 aa28.07■■■□□ 2.08
SS18-224ENST00000584083 PARD3Q8TEW0 1356 aa28.07■■■□□ 2.08
SS18-224ENST00000584083 KAT6BQ8WYB5 2073 aa28.07■■■□□ 2.08
SS18-224ENST00000584083 BCL11BQ9C0K0 894 aaPredicted RBP28.06■■■□□ 2.08
SS18-224ENST00000584083 KIF7Q2M1P5 1343 aa28.06■■■□□ 2.08
SS18-224ENST00000584083 BCL9O00512 1426 aa28.06■■■□□ 2.08
SS18-224ENST00000584083 TNNT2P45379 298 aaPredicted RBP28.05■■■□□ 2.08
SS18-224ENST00000584083 NBPF6Q5VWK0 638 aa28.05■■■□□ 2.08
SS18-224ENST00000584083 NBPF4Q96M43 638 aa28.05■■■□□ 2.08
SS18-224ENST00000584083 PTF1AQ7RTS3 328 aa28.03■■■□□ 2.08
SS18-224ENST00000584083 PSDA5PKW4 1024 aaPredicted RBP28.02■■■□□ 2.08
SS18-224ENST00000584083 USHBP1Q8N6Y0 703 aa28.02■■■□□ 2.08
SS18-224ENST00000584083 DDX54Q8TDD1 881 aaKnown RBP28.02■■■□□ 2.08
SS18-224ENST00000584083 KNSTRNQ9Y448 316 aa28.01■■■□□ 2.07
SS18-224ENST00000584083 RREB1Q92766 1687 aa28■■■□□ 2.07
SS18-224ENST00000584083 NSD2O96028 1365 aa27.99■■■□□ 2.07
SS18-224ENST00000584083 RAPGEF4Q8WZA2 1011 aa27.99■■■□□ 2.07
SS18-224ENST00000584083 ACSBG1Q96GR2 724 aa27.99■■■□□ 2.07
SS18-224ENST00000584083 POLKQ9UBT6 870 aa27.99■■■□□ 2.07
SS18-224ENST00000584083 WASHC2AQ641Q2 1341 aa27.97■■■□□ 2.07
SS18-224ENST00000584083 PLSCR1O15162 318 aa27.97■■■□□ 2.07
SS18-224ENST00000584083 KCNQ2O43526 872 aa27.97■■■□□ 2.07
SS18-224ENST00000584083 R3HDM1Q15032 1099 aaKnown RBP27.97■■■□□ 2.07
SS18-224ENST00000584083 MORC1Q86VD1 984 aa27.97■■■□□ 2.07
SS18-224ENST00000584083 ZCRB1Q8TBF4 217 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms