RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 DEFB132Q7Z7B7 95 aa30.11■■■□□ 2.41
PPP4R1-228ENST00000584074 COL18A1P39060 1754 aa30.1■■■□□ 2.41
PPP4R1-228ENST00000584074 NINLQ9Y2I6 1382 aa30.1■■■□□ 2.41
PPP4R1-228ENST00000584074 CRB1P82279 1406 aa30.1■■■□□ 2.41
PPP4R1-228ENST00000584074 THRAP3Q9Y2W1 955 aaKnown RBP30.09■■■□□ 2.41
PPP4R1-228ENST00000584074 TOM1L2Q6ZVM7 507 aa30.06■■■□□ 2.4
PPP4R1-228ENST00000584074 WDR17Q8IZU2 1322 aa30.05■■■□□ 2.4
PPP4R1-228ENST00000584074 PDE3BQ13370 1112 aa30.04■■■□□ 2.4
PPP4R1-228ENST00000584074 USP54Q70EL1 1684 aa30.04■■■□□ 2.4
PPP4R1-228ENST00000584074 FAM196AQ6ZSG2 479 aa30.01■■■□□ 2.39
PPP4R1-228ENST00000584074 ANKRD36BQ8N2N9 1353 aa30.01■■■□□ 2.39
PPP4R1-228ENST00000584074 OVOS2A0A0J9YW53 1432 aa30■■■□□ 2.39
PPP4R1-228ENST00000584074 OVOS2Q6IE36 1432 aa30■■■□□ 2.39
PPP4R1-228ENST00000584074 CSB-PGBD3P0DP91 1061 aa30■■■□□ 2.39
PPP4R1-228ENST00000584074 BAG6P46379 1132 aa29.98■■■□□ 2.39
PPP4R1-228ENST00000584074 CDCA8Q53HL2 280 aa29.98■■■□□ 2.39
PPP4R1-228ENST00000584074 RGPD5Q99666 1765 aa29.97■■■□□ 2.39
PPP4R1-228ENST00000584074 ABCC6O95255 1503 aa29.96■■■□□ 2.39
PPP4R1-228ENST00000584074 TRIM37O94972 964 aa29.96■■■□□ 2.39
PPP4R1-228ENST00000584074 CARD10Q9BWT7 1032 aa29.96■■■□□ 2.39
PPP4R1-228ENST00000584074 PARP4Q9UKK3 1724 aaKnown RBP29.94■■■□□ 2.38
PPP4R1-228ENST00000584074 COG3Q96JB2 828 aa29.94■■■□□ 2.38
PPP4R1-228ENST00000584074 SRCAPQ6ZRS2 3230 aa29.94■■■□□ 2.38
PPP4R1-228ENST00000584074 RGPD1P0DJD0 1748 aa29.93■■■□□ 2.38
PPP4R1-228ENST00000584074 EN1Q05925 392 aaPredicted RBP29.93■■■□□ 2.38
PPP4R1-228ENST00000584074 DDB1Q16531 1140 aa29.92■■■□□ 2.38
PPP4R1-228ENST00000584074 ERBB3P21860 1342 aa29.91■■■□□ 2.38
PPP4R1-228ENST00000584074 LTN1O94822 1766 aa29.9■■■□□ 2.38
PPP4R1-228ENST00000584074 TNS1Q9HBL0 1735 aaKnown RBP29.89■■■□□ 2.38
PPP4R1-228ENST00000584074 FBLN1P23142 703 aa29.89■■■□□ 2.38
PPP4R1-228ENST00000584074 CDCA7Q9BWT1 371 aaPredicted RBP29.89■■■□□ 2.38
PPP4R1-228ENST00000584074 LRRC37A3O60309 1634 aa29.89■■■□□ 2.37
PPP4R1-228ENST00000584074 FYB1O15117 783 aa29.88■■■□□ 2.37
PPP4R1-228ENST00000584074 ANKRD24Q8TF21 1146 aa29.88■■■□□ 2.37
PPP4R1-228ENST00000584074 CCDC7Q96M83 1385 aa29.88■■■□□ 2.37
PPP4R1-228ENST00000584074 DISP2A7MBM2 1401 aa29.88■■■□□ 2.37
PPP4R1-228ENST00000584074 GGNBP2Q9H3C7 697 aa29.87■■■□□ 2.37
PPP4R1-228ENST00000584074 NLRP2Q9NX02 1062 aa29.87■■■□□ 2.37
PPP4R1-228ENST00000584074 APBA3O96018 575 aa29.86■■■□□ 2.37
PPP4R1-228ENST00000584074 IP6K1Q92551 441 aa29.86■■■□□ 2.37
PPP4R1-228ENST00000584074 HSPA5P11021 654 aaKnown RBP29.84■■■□□ 2.37
PPP4R1-228ENST00000584074 EIF4G2P78344 907 aaKnown RBP eCLIP29.84■■■□□ 2.37
PPP4R1-228ENST00000584074 EZH2Q15910 746 aaKnown RBP29.84■■■□□ 2.37
PPP4R1-228ENST00000584074 CARD14Q9BXL6 1004 aa29.84■■■□□ 2.37
PPP4R1-228ENST00000584074 MAP3K19Q56UN5 1328 aa29.84■■■□□ 2.37
PPP4R1-228ENST00000584074 OVOS2A0A0G2JMS6 1433 aa29.84■■■□□ 2.37
PPP4R1-228ENST00000584074 WNK3Q9BYP7 1800 aa29.84■■■□□ 2.37
PPP4R1-228ENST00000584074 MYOM1P52179 1685 aa29.83■■■□□ 2.37
PPP4R1-228ENST00000584074 MARCH10Q8NA82 808 aaPredicted RBP29.83■■■□□ 2.37
PPP4R1-228ENST00000584074 CAMKK2Q96RR4 588 aa29.82■■■□□ 2.36
PPP4R1-228ENST00000584074 C11orf95C9JLR9 678 aaPredicted RBP29.81■■■□□ 2.36
PPP4R1-228ENST00000584074 POLR3GLQ9BT43 218 aa29.81■■■□□ 2.36
PPP4R1-228ENST00000584074 PEAK1Q9H792 1746 aa29.81■■■□□ 2.36
PPP4R1-228ENST00000584074 EXOC5O00471 708 aa29.8■■■□□ 2.36
PPP4R1-228ENST00000584074 LTV1Q96GA3 475 aaPredicted RBP29.8■■■□□ 2.36
PPP4R1-228ENST00000584074 HOXC9P31274 260 aa29.79■■■□□ 2.36
PPP4R1-228ENST00000584074 AMPHP49418 695 aa29.79■■■□□ 2.36
PPP4R1-228ENST00000584074 RRS1Q15050 365 aaKnown RBP29.78■■■□□ 2.36
PPP4R1-228ENST00000584074 NSD3Q9BZ95 1437 aa29.78■■■□□ 2.36
PPP4R1-228ENST00000584074 PSDA5PKW4 1024 aaPredicted RBP29.76■■■□□ 2.35
PPP4R1-228ENST00000584074 IL2RBP14784 551 aa29.75■■■□□ 2.35
PPP4R1-228ENST00000584074 TNS2Q63HR2 1409 aa29.74■■■□□ 2.35
PPP4R1-228ENST00000584074 PTF1AQ7RTS3 328 aa29.74■■■□□ 2.35
PPP4R1-228ENST00000584074 PARD3Q8TEW0 1356 aa29.74■■■□□ 2.35
PPP4R1-228ENST00000584074 BCL9O00512 1426 aa29.71■■■□□ 2.35
PPP4R1-228ENST00000584074 KIF20BQ96Q89 1820 aa29.71■■■□□ 2.35
PPP4R1-228ENST00000584074 BCL11BQ9C0K0 894 aaPredicted RBP29.71■■■□□ 2.35
PPP4R1-228ENST00000584074 RTL1A6NKG5 1358 aa29.71■■■□□ 2.35
PPP4R1-228ENST00000584074 R3HDM1Q15032 1099 aaKnown RBP29.69■■■□□ 2.34
PPP4R1-228ENST00000584074 SBF2Q86WG5 1849 aa29.67■■■□□ 2.34
PPP4R1-228ENST00000584074 CGNL1Q0VF96 1302 aa29.66■■■□□ 2.34
PPP4R1-228ENST00000584074 FAM208AQ9UK61 1670 aaKnown RBP29.66■■■□□ 2.34
PPP4R1-228ENST00000584074 HSP90AB2PQ58FF8 381 aa29.64■■■□□ 2.34
PPP4R1-228ENST00000584074 RREB1Q92766 1687 aa29.63■■■□□ 2.33
PPP4R1-228ENST00000584074 PLSCR1O15162 318 aa29.63■■■□□ 2.33
PPP4R1-228ENST00000584074 KCNQ2O43526 872 aa29.62■■■□□ 2.33
PPP4R1-228ENST00000584074 NBPF6Q5VWK0 638 aa29.62■■■□□ 2.33
PPP4R1-228ENST00000584074 NBPF4Q96M43 638 aa29.62■■■□□ 2.33
PPP4R1-228ENST00000584074 PANK3Q9H999 370 aa29.62■■■□□ 2.33
PPP4R1-228ENST00000584074 EMILIN1Q9Y6C2 1016 aa29.62■■■□□ 2.33
PPP4R1-228ENST00000584074 FLT4P35916 1363 aa29.62■■■□□ 2.33
PPP4R1-228ENST00000584074 INSRP06213 1382 aa29.61■■■□□ 2.33
PPP4R1-228ENST00000584074 ACSBG1Q96GR2 724 aa29.6■■■□□ 2.33
PPP4R1-228ENST00000584074 KIF24Q5T7B8 1368 aa29.6■■■□□ 2.33
PPP4R1-228ENST00000584074 NUP188Q5SRE5 1749 aa29.59■■■□□ 2.33
PPP4R1-228ENST00000584074 USHBP1Q8N6Y0 703 aa29.59■■■□□ 2.33
PPP4R1-228ENST00000584074 DDX54Q8TDD1 881 aaKnown RBP29.59■■■□□ 2.33
PPP4R1-228ENST00000584074 SMG6Q86US8 1419 aaKnown RBP29.59■■■□□ 2.33
PPP4R1-228ENST00000584074 RGPD2P0DJD1 1756 aa29.58■■■□□ 2.33
PPP4R1-228ENST00000584074 PPM1GO15355 546 aaPredicted RBP29.57■■■□□ 2.32
PPP4R1-228ENST00000584074 NBPF14Q5TI25 921 aa29.57■■■□□ 2.32
PPP4R1-228ENST00000584074 PROM2Q8N271 834 aa29.56■■■□□ 2.32
PPP4R1-228ENST00000584074 MEGF6O75095 1541 aa29.55■■■□□ 2.32
PPP4R1-228ENST00000584074 RGPD3A6NKT7 1758 aaPredicted RBP29.54■■■□□ 2.32
PPP4R1-228ENST00000584074 RGPD4Q7Z3J3 1758 aa29.54■■■□□ 2.32
PPP4R1-228ENST00000584074 TNNT2P45379 298 aaPredicted RBP29.53■■■□□ 2.32
PPP4R1-228ENST00000584074 ZCRB1Q8TBF4 217 aaKnown RBP29.53■■■□□ 2.32
PPP4R1-228ENST00000584074 NHSQ6T4R5 1651 aa29.53■■■□□ 2.32
PPP4R1-228ENST00000584074 POLKQ9UBT6 870 aa29.51■■■□□ 2.31
PPP4R1-228ENST00000584074 TXNRD1Q16881 649 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms