RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 NFAT5O94916 1531 aa11.77□□□□□ -0.52
SUPT6H-208ENST00000583340 BARGINQ6ZT62 677 aa11.77□□□□□ -0.53
SUPT6H-208ENST00000583340 TOM1L2Q6ZVM7 507 aa11.77□□□□□ -0.53
SUPT6H-208ENST00000583340 CAMTA1Q9Y6Y1 1673 aa11.77□□□□□ -0.53
SUPT6H-208ENST00000583340 CRB1P82279 1406 aa11.77□□□□□ -0.53
SUPT6H-208ENST00000583340 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.53
SUPT6H-208ENST00000583340 LARP1Q6PKG0 1096 aaKnown RBP11.76□□□□□ -0.53
SUPT6H-208ENST00000583340 KRT27Q7Z3Y8 459 aa11.76□□□□□ -0.53
SUPT6H-208ENST00000583340 CCDC125Q86Z20 511 aa11.76□□□□□ -0.53
SUPT6H-208ENST00000583340 CDCA7Q9BWT1 371 aaPredicted RBP11.76□□□□□ -0.53
SUPT6H-208ENST00000583340 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
SUPT6H-208ENST00000583340 WDR17Q8IZU2 1322 aa11.76□□□□□ -0.53
SUPT6H-208ENST00000583340 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
SUPT6H-208ENST00000583340 SF3B2Q13435 895 aaKnown RBP11.75□□□□□ -0.53
SUPT6H-208ENST00000583340 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
SUPT6H-208ENST00000583340 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
SUPT6H-208ENST00000583340 MYOM1P52179 1685 aa11.75□□□□□ -0.53
SUPT6H-208ENST00000583340 FYB1O15117 783 aa11.74□□□□□ -0.53
SUPT6H-208ENST00000583340 AMPHP49418 695 aa11.74□□□□□ -0.53
SUPT6H-208ENST00000583340 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
SUPT6H-208ENST00000583340 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
SUPT6H-208ENST00000583340 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
SUPT6H-208ENST00000583340 BLMP54132 1417 aaPredicted RBP11.74□□□□□ -0.53
SUPT6H-208ENST00000583340 CCDC7Q96M83 1385 aa11.73□□□□□ -0.53
SUPT6H-208ENST00000583340 KIF20BQ96Q89 1820 aa11.73□□□□□ -0.53
SUPT6H-208ENST00000583340 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
SUPT6H-208ENST00000583340 GGNBP2Q9H3C7 697 aa11.73□□□□□ -0.53
SUPT6H-208ENST00000583340 SMG6Q86US8 1419 aaKnown RBP11.72□□□□□ -0.53
SUPT6H-208ENST00000583340 NSD2O96028 1365 aa11.72□□□□□ -0.53
SUPT6H-208ENST00000583340 IP6K1Q92551 441 aa11.72□□□□□ -0.53
SUPT6H-208ENST00000583340 KNSTRNQ9Y448 316 aa11.72□□□□□ -0.53
SUPT6H-208ENST00000583340 LTN1O94822 1766 aa11.72□□□□□ -0.53
SUPT6H-208ENST00000583340 COL18A1P39060 1754 aa11.72□□□□□ -0.53
SUPT6H-208ENST00000583340 KIF24Q5T7B8 1368 aa11.71□□□□□ -0.53
SUPT6H-208ENST00000583340 ERBB3P21860 1342 aa11.71□□□□□ -0.53
SUPT6H-208ENST00000583340 PANK3Q9H999 370 aa11.71□□□□□ -0.53
SUPT6H-208ENST00000583340 NLRP2Q9NX02 1062 aa11.71□□□□□ -0.53
SUPT6H-208ENST00000583340 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
SUPT6H-208ENST00000583340 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.54
SUPT6H-208ENST00000583340 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
SUPT6H-208ENST00000583340 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
SUPT6H-208ENST00000583340 FAM196AQ6ZSG2 479 aa11.7□□□□□ -0.54
SUPT6H-208ENST00000583340 ANKRD24Q8TF21 1146 aa11.7□□□□□ -0.54
SUPT6H-208ENST00000583340 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
SUPT6H-208ENST00000583340 DDB1Q16531 1140 aa11.69□□□□□ -0.54
SUPT6H-208ENST00000583340 BRWD3Q6RI45 1802 aa11.69□□□□□ -0.54
SUPT6H-208ENST00000583340 FLT4P35916 1363 aa11.68□□□□□ -0.54
SUPT6H-208ENST00000583340 HOXC9P31274 260 aa11.68□□□□□ -0.54
SUPT6H-208ENST00000583340 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
SUPT6H-208ENST00000583340 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
SUPT6H-208ENST00000583340 RGPD5Q99666 1765 aa11.67□□□□□ -0.54
SUPT6H-208ENST00000583340 PARP4Q9UKK3 1724 aaKnown RBP11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 EXOC5O00471 708 aa11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 IL2RBP14784 551 aa11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 BAG6P46379 1132 aa11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 LTV1Q96GA3 475 aaPredicted RBP11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 OVOS2A0A0G2JMS6 1433 aa11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 INSRP06213 1382 aa11.66□□□□□ -0.54
SUPT6H-208ENST00000583340 PPM1GO15355 546 aaPredicted RBP11.65□□□□□ -0.54
SUPT6H-208ENST00000583340 EP400Q96L91 3159 aa11.65□□□□□ -0.55
SUPT6H-208ENST00000583340 ANKRD26Q9UPS8 1709 aa11.64□□□□□ -0.55
SUPT6H-208ENST00000583340 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
SUPT6H-208ENST00000583340 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
SUPT6H-208ENST00000583340 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
SUPT6H-208ENST00000583340 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
SUPT6H-208ENST00000583340 LRRC37A3O60309 1634 aa11.62□□□□□ -0.55
SUPT6H-208ENST00000583340 FBLN1P23142 703 aa11.62□□□□□ -0.55
SUPT6H-208ENST00000583340 TNNT2P45379 298 aaPredicted RBP11.62□□□□□ -0.55
SUPT6H-208ENST00000583340 RAPGEF4Q8WZA2 1011 aa11.62□□□□□ -0.55
SUPT6H-208ENST00000583340 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
SUPT6H-208ENST00000583340 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
SUPT6H-208ENST00000583340 HSP90AB2PQ58FF8 381 aa11.61□□□□□ -0.55
SUPT6H-208ENST00000583340 FAM182BQ5T319 152 aa11.61□□□□□ -0.55
SUPT6H-208ENST00000583340 BCL9O00512 1426 aa11.6□□□□□ -0.55
SUPT6H-208ENST00000583340 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
SUPT6H-208ENST00000583340 NPC1L1Q9UHC9 1359 aa11.6□□□□□ -0.55
SUPT6H-208ENST00000583340 TRIM37O94972 964 aa11.6□□□□□ -0.55
SUPT6H-208ENST00000583340 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
SUPT6H-208ENST00000583340 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
SUPT6H-208ENST00000583340 POLKQ9UBT6 870 aa11.6□□□□□ -0.55
SUPT6H-208ENST00000583340 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
SUPT6H-208ENST00000583340 APBA3O96018 575 aa11.59□□□□□ -0.55
SUPT6H-208ENST00000583340 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
SUPT6H-208ENST00000583340 MARCH10Q8NA82 808 aaPredicted RBP11.58□□□□□ -0.56
SUPT6H-208ENST00000583340 ZCRB1Q8TBF4 217 aaKnown RBP11.58□□□□□ -0.56
SUPT6H-208ENST00000583340 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
SUPT6H-208ENST00000583340 PLEKHG2Q9H7P9 1386 aa11.57□□□□□ -0.56
SUPT6H-208ENST00000583340 DEFB132Q7Z7B7 95 aa11.57□□□□□ -0.56
SUPT6H-208ENST00000583340 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
SUPT6H-208ENST00000583340 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
SUPT6H-208ENST00000583340 PER1O15534 1290 aaPredicted RBP11.56□□□□□ -0.56
SUPT6H-208ENST00000583340 CC2D1BQ5T0F9 858 aaKnown RBP11.56□□□□□ -0.56
SUPT6H-208ENST00000583340 DDX54Q8TDD1 881 aaKnown RBP11.56□□□□□ -0.56
SUPT6H-208ENST00000583340 PCDH11XQ9BZA7 1347 aa11.56□□□□□ -0.56
SUPT6H-208ENST00000583340 PCDH11YQ9BZA8 1340 aa11.56□□□□□ -0.56
SUPT6H-208ENST00000583340 EN1Q05925 392 aaPredicted RBP11.55□□□□□ -0.56
SUPT6H-208ENST00000583340 USHBP1Q8N6Y0 703 aa11.55□□□□□ -0.56
SUPT6H-208ENST00000583340 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
SUPT6H-208ENST00000583340 TNS1Q9HBL0 1735 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms