RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CDV3Q9UKY7 258 aaKnown RBP9.35□□□□□ -0.91
COPS3-217ENST00000583160 CCDC116Q8IYX3 515 aa9.34□□□□□ -0.91
COPS3-217ENST00000583160 KIFC2Q96AC6 838 aa9.34□□□□□ -0.91
COPS3-217ENST00000583160 KCTD15Q96SI1 283 aaPredicted RBP9.34□□□□□ -0.91
COPS3-217ENST00000583160 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
COPS3-217ENST00000583160 MTMR14Q8NCE2 650 aa9.33□□□□□ -0.92
COPS3-217ENST00000583160 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
COPS3-217ENST00000583160 ZFP42Q96MM3 310 aa9.32□□□□□ -0.92
COPS3-217ENST00000583160 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
COPS3-217ENST00000583160 SOCS7O14512 581 aa9.31□□□□□ -0.92
COPS3-217ENST00000583160 ZBBXA8MT70 800 aa9.3□□□□□ -0.92
COPS3-217ENST00000583160 SCARF1Q14162 830 aa9.3□□□□□ -0.92
COPS3-217ENST00000583160 PPP1R26Q5T8A7 1209 aaPredicted RBP9.3□□□□□ -0.92
COPS3-217ENST00000583160 PURBQ96QR8 312 aaKnown RBP9.3□□□□□ -0.92
COPS3-217ENST00000583160 NBPF20Q3BBV1 942 aa9.29□□□□□ -0.92
COPS3-217ENST00000583160 INTS6LQ5JSJ4 861 aaKnown RBP9.29□□□□□ -0.92
COPS3-217ENST00000583160 APBB1O00213 710 aa9.28□□□□□ -0.92
COPS3-217ENST00000583160 FBXO45P0C2W1 286 aa9.28□□□□□ -0.92
COPS3-217ENST00000583160 NDUFB9Q9Y6M9 179 aa9.28□□□□□ -0.92
COPS3-217ENST00000583160 DHX9Q08211 1270 aaKnown RBP9.27□□□□□ -0.93
COPS3-217ENST00000583160 MEIOBQ8N635 442 aa9.27□□□□□ -0.93
COPS3-217ENST00000583160 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
COPS3-217ENST00000583160 RAB15P59190 212 aa9.26□□□□□ -0.93
COPS3-217ENST00000583160 C6orf118Q5T5N4 469 aa9.26□□□□□ -0.93
COPS3-217ENST00000583160 GPR37L1O60883 481 aa9.25□□□□□ -0.93
COPS3-217ENST00000583160 UPP2O95045 317 aa9.25□□□□□ -0.93
COPS3-217ENST00000583160 NR1H3Q13133 447 aa9.25□□□□□ -0.93
COPS3-217ENST00000583160 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
COPS3-217ENST00000583160 PCDHB9Q9Y5E1 797 aa9.25□□□□□ -0.93
COPS3-217ENST00000583160 ESPNB1AK53 854 aa9.24□□□□□ -0.93
COPS3-217ENST00000583160 BMP2P12643 396 aa9.24□□□□□ -0.93
COPS3-217ENST00000583160 CBLBQ13191 982 aa9.24□□□□□ -0.93
COPS3-217ENST00000583160 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
COPS3-217ENST00000583160 TMPRSS4Q9NRS4 437 aa9.23□□□□□ -0.93
COPS3-217ENST00000583160 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
COPS3-217ENST00000583160 TREML4Q6UXN2 200 aa9.22□□□□□ -0.93
COPS3-217ENST00000583160 Q6ZVU0 165 aa9.22□□□□□ -0.93
COPS3-217ENST00000583160 PRM3Q9NNZ6 103 aa9.22□□□□□ -0.93
COPS3-217ENST00000583160 TBC1D2BQ9UPU7 963 aa9.22□□□□□ -0.93
COPS3-217ENST00000583160 ZNF330Q9Y3S2 320 aaPredicted RBP9.22□□□□□ -0.93
COPS3-217ENST00000583160 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.94
COPS3-217ENST00000583160 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
COPS3-217ENST00000583160 SOBPA7XYQ1 873 aa9.2□□□□□ -0.94
COPS3-217ENST00000583160 TERTO14746 1132 aaKnown RBP9.2□□□□□ -0.94
COPS3-217ENST00000583160 MCCD1P59942 119 aaPredicted RBP9.2□□□□□ -0.94
COPS3-217ENST00000583160 ZNF784Q8NCA9 323 aaPredicted RBP9.2□□□□□ -0.94
COPS3-217ENST00000583160 WFS1O76024 890 aa9.19□□□□□ -0.94
COPS3-217ENST00000583160 NFX1Q12986 1120 aaKnown RBP9.19□□□□□ -0.94
COPS3-217ENST00000583160 MAN1A2O60476 641 aa9.18□□□□□ -0.94
COPS3-217ENST00000583160 ADD1P35611 737 aaKnown RBP9.18□□□□□ -0.94
COPS3-217ENST00000583160 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
COPS3-217ENST00000583160 ZNF592Q92610 1267 aa9.18□□□□□ -0.94
COPS3-217ENST00000583160 AGBL1Q96MI9 1066 aa9.18□□□□□ -0.94
COPS3-217ENST00000583160 NXF1Q9UBU9 619 aaKnown RBP9.18□□□□□ -0.94
COPS3-217ENST00000583160 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
COPS3-217ENST00000583160 LILRA1O75019 489 aa9.17□□□□□ -0.94
COPS3-217ENST00000583160 MCM6Q14566 821 aa9.17□□□□□ -0.94
COPS3-217ENST00000583160 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
COPS3-217ENST00000583160 SPINT1O43278 529 aa9.16□□□□□ -0.94
COPS3-217ENST00000583160 RELBQ01201 579 aa9.16□□□□□ -0.94
COPS3-217ENST00000583160 IRF5Q13568 498 aa9.16□□□□□ -0.94
COPS3-217ENST00000583160 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
COPS3-217ENST00000583160 ADH1AP07327 375 aa9.15□□□□□ -0.94
COPS3-217ENST00000583160 ABL2P42684 1182 aa9.15□□□□□ -0.94
COPS3-217ENST00000583160 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
COPS3-217ENST00000583160 TTLL8A6PVC2 850 aa9.14□□□□□ -0.95
COPS3-217ENST00000583160 VEGFBP49765 207 aa9.14□□□□□ -0.95
COPS3-217ENST00000583160 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
COPS3-217ENST00000583160 SLC16A10Q8TF71 515 aa9.14□□□□□ -0.95
COPS3-217ENST00000583160 TRIM52Q96A61 297 aa9.14□□□□□ -0.95
COPS3-217ENST00000583160 DNMT3LQ9UJW3 386 aa9.14□□□□□ -0.95
COPS3-217ENST00000583160 FIGNL2A6NMB9 653 aa9.13□□□□□ -0.95
COPS3-217ENST00000583160 NPAS3Q8IXF0 933 aa9.13□□□□□ -0.95
COPS3-217ENST00000583160 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
COPS3-217ENST00000583160 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
COPS3-217ENST00000583160 VAC14Q08AM6 782 aa9.12□□□□□ -0.95
COPS3-217ENST00000583160 TMEM132AQ24JP5 1023 aa9.12□□□□□ -0.95
COPS3-217ENST00000583160 KDF1Q8NAX2 398 aaPredicted RBP9.12□□□□□ -0.95
COPS3-217ENST00000583160 INSM2Q96T92 566 aaPredicted RBP9.12□□□□□ -0.95
COPS3-217ENST00000583160 CEP126Q9P2H0 1117 aa9.12□□□□□ -0.95
COPS3-217ENST00000583160 PTGIRP43119 386 aa9.11□□□□□ -0.95
COPS3-217ENST00000583160 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
COPS3-217ENST00000583160 CTSOP43234 321 aaPredicted RBP9.1□□□□□ -0.95
COPS3-217ENST00000583160 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.1□□□□□ -0.95
COPS3-217ENST00000583160 CC2D2BQ6DHV5 1058 aa9.1□□□□□ -0.95
COPS3-217ENST00000583160 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
COPS3-217ENST00000583160 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
COPS3-217ENST00000583160 H3BM21 787 aa9.09□□□□□ -0.95
COPS3-217ENST00000583160 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
COPS3-217ENST00000583160 WASHC4Q2M389 1173 aa9.09□□□□□ -0.95
COPS3-217ENST00000583160 COG6Q9Y2V7 657 aa9.09□□□□□ -0.95
COPS3-217ENST00000583160 ATP5J2-PTCD1G3V325 749 aa9.08□□□□□ -0.96
COPS3-217ENST00000583160 SCTRP47872 440 aa9.07□□□□□ -0.96
COPS3-217ENST00000583160 IRF7Q92985 503 aa9.07□□□□□ -0.96
COPS3-217ENST00000583160 CCDC85AQ96PX6 553 aaPredicted RBP9.07□□□□□ -0.96
COPS3-217ENST00000583160 PPFIA3O75145 1194 aa9.06□□□□□ -0.96
COPS3-217ENST00000583160 FLIIQ13045 1269 aa9.06□□□□□ -0.96
COPS3-217ENST00000583160 PHTF2Q8N3S3 785 aa9.06□□□□□ -0.96
COPS3-217ENST00000583160 ESF1Q9H501 851 aaKnown RBP9.06□□□□□ -0.96
COPS3-217ENST00000583160 WIPF1O43516 503 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms