RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-209ENST00000581832 CRB1P82279 1406 aa17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 LTN1O94822 1766 aa17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 CARD14Q9BXL6 1004 aa17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 ABCC6O95255 1503 aa17.31■□□□□ 0.36
SMARCD2-209ENST00000581832 FYB1O15117 783 aa17.3■□□□□ 0.36
SMARCD2-209ENST00000581832 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
SMARCD2-209ENST00000581832 THRAP3Q9Y2W1 955 aaKnown RBP17.3■□□□□ 0.36
SMARCD2-209ENST00000581832 WDR17Q8IZU2 1322 aa17.29■□□□□ 0.36
SMARCD2-209ENST00000581832 A0A0G2JS52 829 aa17.27■□□□□ 0.36
SMARCD2-209ENST00000581832 MYT1Q01538 1121 aa17.27■□□□□ 0.36
SMARCD2-209ENST00000581832 FAM182BQ5T319 152 aa17.27■□□□□ 0.36
SMARCD2-209ENST00000581832 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.35
SMARCD2-209ENST00000581832 PARP4Q9UKK3 1724 aaKnown RBP17.27■□□□□ 0.35
SMARCD2-209ENST00000581832 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
SMARCD2-209ENST00000581832 FBLN1P23142 703 aa17.26■□□□□ 0.35
SMARCD2-209ENST00000581832 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
SMARCD2-209ENST00000581832 COG3Q96JB2 828 aa17.25■□□□□ 0.35
SMARCD2-209ENST00000581832 WNK3Q9BYP7 1800 aa17.24■□□□□ 0.35
SMARCD2-209ENST00000581832 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
SMARCD2-209ENST00000581832 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
SMARCD2-209ENST00000581832 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
SMARCD2-209ENST00000581832 ERBB3P21860 1342 aa17.23■□□□□ 0.35
SMARCD2-209ENST00000581832 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
SMARCD2-209ENST00000581832 DISP2A7MBM2 1401 aa17.22■□□□□ 0.35
SMARCD2-209ENST00000581832 IP6K1Q92551 441 aa17.22■□□□□ 0.35
SMARCD2-209ENST00000581832 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.35
SMARCD2-209ENST00000581832 SRCAPQ6ZRS2 3230 aa17.21■□□□□ 0.35
SMARCD2-209ENST00000581832 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
SMARCD2-209ENST00000581832 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
SMARCD2-209ENST00000581832 PEAK1Q9H792 1746 aa17.2■□□□□ 0.34
SMARCD2-209ENST00000581832 TNS1Q9HBL0 1735 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-209ENST00000581832 HOXC9P31274 260 aa17.19■□□□□ 0.34
SMARCD2-209ENST00000581832 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
SMARCD2-209ENST00000581832 ANKRD24Q8TF21 1146 aa17.19■□□□□ 0.34
SMARCD2-209ENST00000581832 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
SMARCD2-209ENST00000581832 CCDC7Q96M83 1385 aa17.18■□□□□ 0.34
SMARCD2-209ENST00000581832 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
SMARCD2-209ENST00000581832 PDE3BQ13370 1112 aa17.18■□□□□ 0.34
SMARCD2-209ENST00000581832 RRS1Q15050 365 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-209ENST00000581832 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
SMARCD2-209ENST00000581832 SBF2Q86WG5 1849 aa17.17■□□□□ 0.34
SMARCD2-209ENST00000581832 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
SMARCD2-209ENST00000581832 DDB1Q16531 1140 aa17.16■□□□□ 0.34
SMARCD2-209ENST00000581832 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
SMARCD2-209ENST00000581832 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
SMARCD2-209ENST00000581832 PANK3Q9H999 370 aa17.15■□□□□ 0.34
SMARCD2-209ENST00000581832 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
SMARCD2-209ENST00000581832 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
SMARCD2-209ENST00000581832 MAP2P11137 1827 aaKnown RBP17.14■□□□□ 0.34
SMARCD2-209ENST00000581832 FAM208AQ9UK61 1670 aaKnown RBP17.14■□□□□ 0.33
SMARCD2-209ENST00000581832 TRIM37O94972 964 aa17.14■□□□□ 0.33
SMARCD2-209ENST00000581832 AMPHP49418 695 aa17.14■□□□□ 0.33
SMARCD2-209ENST00000581832 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
SMARCD2-209ENST00000581832 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
SMARCD2-209ENST00000581832 BCL9O00512 1426 aa17.13■□□□□ 0.33
SMARCD2-209ENST00000581832 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
SMARCD2-209ENST00000581832 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
SMARCD2-209ENST00000581832 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
SMARCD2-209ENST00000581832 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
SMARCD2-209ENST00000581832 OVOS2A0A0G2JMS6 1433 aa17.12■□□□□ 0.33
SMARCD2-209ENST00000581832 EXOC5O00471 708 aa17.11■□□□□ 0.33
SMARCD2-209ENST00000581832 IL2RBP14784 551 aa17.11■□□□□ 0.33
SMARCD2-209ENST00000581832 BAG6P46379 1132 aa17.11■□□□□ 0.33
SMARCD2-209ENST00000581832 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
SMARCD2-209ENST00000581832 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
SMARCD2-209ENST00000581832 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
SMARCD2-209ENST00000581832 INSRP06213 1382 aa17.11■□□□□ 0.33
SMARCD2-209ENST00000581832 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
SMARCD2-209ENST00000581832 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
SMARCD2-209ENST00000581832 NBPF6Q5VWK0 638 aa17.09■□□□□ 0.33
SMARCD2-209ENST00000581832 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
SMARCD2-209ENST00000581832 NBPF4Q96M43 638 aa17.09■□□□□ 0.33
SMARCD2-209ENST00000581832 FLT4P35916 1363 aa17.09■□□□□ 0.33
SMARCD2-209ENST00000581832 EZH2Q15910 746 aaKnown RBP17.08■□□□□ 0.32
SMARCD2-209ENST00000581832 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
SMARCD2-209ENST00000581832 APBA3O96018 575 aa17.07■□□□□ 0.32
SMARCD2-209ENST00000581832 KAT6BQ8WYB5 2073 aa17.06■□□□□ 0.32
SMARCD2-209ENST00000581832 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
SMARCD2-209ENST00000581832 PER1O15534 1290 aaPredicted RBP17.06■□□□□ 0.32
SMARCD2-209ENST00000581832 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
SMARCD2-209ENST00000581832 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
SMARCD2-209ENST00000581832 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
SMARCD2-209ENST00000581832 NSD2O96028 1365 aa17.04■□□□□ 0.32
SMARCD2-209ENST00000581832 RREB1Q92766 1687 aa17.04■□□□□ 0.32
SMARCD2-209ENST00000581832 MEGF6O75095 1541 aa17.04■□□□□ 0.32
SMARCD2-209ENST00000581832 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
SMARCD2-209ENST00000581832 PARD3Q8TEW0 1356 aa17.03■□□□□ 0.32
SMARCD2-209ENST00000581832 PLSCR1O15162 318 aa17.03■□□□□ 0.32
SMARCD2-209ENST00000581832 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
SMARCD2-209ENST00000581832 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.32
SMARCD2-209ENST00000581832 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.31
SMARCD2-209ENST00000581832 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.31
SMARCD2-209ENST00000581832 KCNQ2O43526 872 aa17.01■□□□□ 0.31
SMARCD2-209ENST00000581832 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
SMARCD2-209ENST00000581832 SMG6Q86US8 1419 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms