RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TTC21AQ8NDW8 1320 aa18.56■□□□□ 0.56
CSNK1D-220ENST00000581737 C11orf95C9JLR9 678 aaPredicted RBP18.56■□□□□ 0.56
CSNK1D-220ENST00000581737 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
CSNK1D-220ENST00000581737 PHRF1Q9P1Y6 1649 aaKnown RBP18.55■□□□□ 0.56
CSNK1D-220ENST00000581737 YY1P25490 414 aa18.54■□□□□ 0.56
CSNK1D-220ENST00000581737 BARGINQ6ZT62 677 aa18.54■□□□□ 0.56
CSNK1D-220ENST00000581737 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
CSNK1D-220ENST00000581737 RREB1Q92766 1687 aa18.54■□□□□ 0.56
CSNK1D-220ENST00000581737 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
CSNK1D-220ENST00000581737 TTC21BQ7Z4L5 1316 aa18.53■□□□□ 0.56
CSNK1D-220ENST00000581737 NUP188Q5SRE5 1749 aa18.53■□□□□ 0.56
CSNK1D-220ENST00000581737 PIK3C2AO00443 1686 aa18.53■□□□□ 0.56
CSNK1D-220ENST00000581737 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
CSNK1D-220ENST00000581737 PDE3BQ13370 1112 aa18.52■□□□□ 0.56
CSNK1D-220ENST00000581737 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
CSNK1D-220ENST00000581737 EVA1CP58658 441 aa18.51■□□□□ 0.55
CSNK1D-220ENST00000581737 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
CSNK1D-220ENST00000581737 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
CSNK1D-220ENST00000581737 NLRP13Q86W25 1043 aa18.49■□□□□ 0.55
CSNK1D-220ENST00000581737 TCP11L2Q8N4U5 519 aa18.49■□□□□ 0.55
CSNK1D-220ENST00000581737 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
CSNK1D-220ENST00000581737 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
CSNK1D-220ENST00000581737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.552e-7■■□□□ 13.2
CSNK1D-220ENST00000581737 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
CSNK1D-220ENST00000581737 NBPF14Q5TI25 921 aa18.47■□□□□ 0.55
CSNK1D-220ENST00000581737 PDGFDQ9GZP0 370 aaPredicted RBP18.47■□□□□ 0.55
CSNK1D-220ENST00000581737 PANK3Q9H999 370 aa18.47■□□□□ 0.55
CSNK1D-220ENST00000581737 USP19O94966 1318 aa18.47■□□□□ 0.55
CSNK1D-220ENST00000581737 USP31Q70CQ4 1352 aa18.46■□□□□ 0.55
CSNK1D-220ENST00000581737 KCNQ2O43526 872 aa18.46■□□□□ 0.55
CSNK1D-220ENST00000581737 NLRP6P59044 892 aa18.46■□□□□ 0.55
CSNK1D-220ENST00000581737 CGNL1Q0VF96 1302 aa18.46■□□□□ 0.55
CSNK1D-220ENST00000581737 CPDO75976 1380 aa18.45■□□□□ 0.54
CSNK1D-220ENST00000581737 SPON1Q9HCB6 807 aa18.45■□□□□ 0.54
CSNK1D-220ENST00000581737 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
CSNK1D-220ENST00000581737 SLIT3O75094 1523 aa18.44■□□□□ 0.54
CSNK1D-220ENST00000581737 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
CSNK1D-220ENST00000581737 COL5A2P05997 1499 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-220ENST00000581737 OVOS2A0A0J9YW53 1432 aa18.43■□□□□ 0.54
CSNK1D-220ENST00000581737 OVOS2Q6IE36 1432 aa18.43■□□□□ 0.54
CSNK1D-220ENST00000581737 NME9Q86XW9 330 aa18.43■□□□□ 0.54
CSNK1D-220ENST00000581737 PPP1R1BQ9UD71 204 aaPredicted RBP18.43■□□□□ 0.54
CSNK1D-220ENST00000581737 GCP02774 474 aa18.42■□□□□ 0.54
CSNK1D-220ENST00000581737 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
CSNK1D-220ENST00000581737 KNSTRNQ9Y448 316 aa18.42■□□□□ 0.54
CSNK1D-220ENST00000581737 ANKRD26Q9UPS8 1709 aa18.42■□□□□ 0.54
CSNK1D-220ENST00000581737 NSD2O96028 1365 aa18.42■□□□□ 0.54
CSNK1D-220ENST00000581737 PROM2Q8N271 834 aa18.41■□□□□ 0.54
CSNK1D-220ENST00000581737 COG3Q96JB2 828 aa18.41■□□□□ 0.54
CSNK1D-220ENST00000581737 THRAP3Q9Y2W1 955 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-220ENST00000581737 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
CSNK1D-220ENST00000581737 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
CSNK1D-220ENST00000581737 FYB1O15117 783 aa18.39■□□□□ 0.53
CSNK1D-220ENST00000581737 PARP4Q9UKK3 1724 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-220ENST00000581737 CRB1P82279 1406 aa18.38■□□□□ 0.53
CSNK1D-220ENST00000581737 PLSCR1O15162 318 aa18.37■□□□□ 0.53
CSNK1D-220ENST00000581737 GGNBP2Q9H3C7 697 aa18.37■□□□□ 0.53
CSNK1D-220ENST00000581737 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
CSNK1D-220ENST00000581737 NFAT5O94916 1531 aa18.37■□□□□ 0.53
CSNK1D-220ENST00000581737 ZBTB7AO95365 584 aa18.36■□□□□ 0.53
CSNK1D-220ENST00000581737 MARCH10Q8NA82 808 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-220ENST00000581737 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
CSNK1D-220ENST00000581737 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
CSNK1D-220ENST00000581737 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
CSNK1D-220ENST00000581737 PTGER2P43116 358 aa18.35■□□□□ 0.53
CSNK1D-220ENST00000581737 ABCC6O95255 1503 aa18.34■□□□□ 0.53
CSNK1D-220ENST00000581737 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
CSNK1D-220ENST00000581737 DDB1Q16531 1140 aa18.34■□□□□ 0.53
CSNK1D-220ENST00000581737 BCL11BQ9C0K0 894 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-220ENST00000581737 LTN1O94822 1766 aa18.33■□□□□ 0.53
CSNK1D-220ENST00000581737 SOX12O15370 315 aa18.33■□□□□ 0.52
CSNK1D-220ENST00000581737 PER1O15534 1290 aaPredicted RBP18.33■□□□□ 0.52
CSNK1D-220ENST00000581737 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
CSNK1D-220ENST00000581737 AMER1Q5JTC6 1135 aaPredicted RBP18.32■□□□□ 0.52
CSNK1D-220ENST00000581737 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
CSNK1D-220ENST00000581737 ATF5Q9Y2D1 282 aaPredicted RBP18.32■□□□□ 0.52
CSNK1D-220ENST00000581737 DDX10Q13206 875 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-220ENST00000581737 ARHGEF25Q86VW2 580 aa18.3■□□□□ 0.52
CSNK1D-220ENST00000581737 ZNF784Q8NCA9 323 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-220ENST00000581737 SBF2Q86WG5 1849 aa18.3■□□□□ 0.52
CSNK1D-220ENST00000581737 MORC1Q86VD1 984 aa18.29■□□□□ 0.52
CSNK1D-220ENST00000581737 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
CSNK1D-220ENST00000581737 COL18A1P39060 1754 aa18.29■□□□□ 0.52
CSNK1D-220ENST00000581737 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
CSNK1D-220ENST00000581737 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
CSNK1D-220ENST00000581737 TXNRD1Q16881 649 aa18.28■□□□□ 0.52
CSNK1D-220ENST00000581737 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
CSNK1D-220ENST00000581737 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
CSNK1D-220ENST00000581737 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-220ENST00000581737 WDR17Q8IZU2 1322 aa18.27■□□□□ 0.52
CSNK1D-220ENST00000581737 MIER1Q8N108 512 aa18.27■□□□□ 0.52
CSNK1D-220ENST00000581737 BCL9O00512 1426 aa18.26■□□□□ 0.51
CSNK1D-220ENST00000581737 ANP32CO43423 234 aa18.26■□□□□ 0.51
CSNK1D-220ENST00000581737 CENPBP07199 599 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-220ENST00000581737 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
CSNK1D-220ENST00000581737 SYT17Q9BSW7 474 aa18.26■□□□□ 0.51
CSNK1D-220ENST00000581737 FHDC1Q9C0D6 1143 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-220ENST00000581737 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-220ENST00000581737 SLC15A2Q16348 729 aa18.25■□□□□ 0.51
CSNK1D-220ENST00000581737 CC2D1BQ5T0F9 858 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms