RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 NINLQ9Y2I6 1382 aa17.64■□□□□ 0.41
CBX1-206ENST00000581003 FBLN1P23142 703 aa17.63■□□□□ 0.41
CBX1-206ENST00000581003 CRB1P82279 1406 aa17.63■□□□□ 0.41
CBX1-206ENST00000581003 LTN1O94822 1766 aa17.62■□□□□ 0.41
CBX1-206ENST00000581003 HSPA5P11021 654 aaKnown RBP17.62■□□□□ 0.41
CBX1-206ENST00000581003 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
CBX1-206ENST00000581003 DEFB132Q7Z7B7 95 aa17.61■□□□□ 0.41
CBX1-206ENST00000581003 BLMP54132 1417 aaPredicted RBP17.61■□□□□ 0.41
CBX1-206ENST00000581003 TCP11L2Q8N4U5 519 aa17.6■□□□□ 0.41
CBX1-206ENST00000581003 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
CBX1-206ENST00000581003 WNK3Q9BYP7 1800 aa17.59■□□□□ 0.41
CBX1-206ENST00000581003 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
CBX1-206ENST00000581003 WDR17Q8IZU2 1322 aa17.58■□□□□ 0.4
CBX1-206ENST00000581003 TOM1L2Q6ZVM7 507 aa17.58■□□□□ 0.4
CBX1-206ENST00000581003 POLR3GLQ9BT43 218 aa17.58■□□□□ 0.4
CBX1-206ENST00000581003 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.4
CBX1-206ENST00000581003 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.4
CBX1-206ENST00000581003 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.4
CBX1-206ENST00000581003 TNS1Q9HBL0 1735 aaKnown RBP17.57■□□□□ 0.4
CBX1-206ENST00000581003 ABCC6O95255 1503 aa17.57■□□□□ 0.4
CBX1-206ENST00000581003 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
CBX1-206ENST00000581003 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
CBX1-206ENST00000581003 C11orf95C9JLR9 678 aaPredicted RBP17.55■□□□□ 0.4
CBX1-206ENST00000581003 FYB1O15117 783 aa17.55■□□□□ 0.4
CBX1-206ENST00000581003 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
CBX1-206ENST00000581003 CSB-PGBD3P0DP91 1061 aa17.55■□□□□ 0.4
CBX1-206ENST00000581003 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
CBX1-206ENST00000581003 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
CBX1-206ENST00000581003 ERBB3P21860 1342 aa17.53■□□□□ 0.4
CBX1-206ENST00000581003 MAP3K19Q56UN5 1328 aa17.53■□□□□ 0.4
CBX1-206ENST00000581003 COG3Q96JB2 828 aa17.53■□□□□ 0.4
CBX1-206ENST00000581003 THRAP3Q9Y2W1 955 aaKnown RBP17.53■□□□□ 0.4
CBX1-206ENST00000581003 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
CBX1-206ENST00000581003 PEAK1Q9H792 1746 aa17.52■□□□□ 0.4
CBX1-206ENST00000581003 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
CBX1-206ENST00000581003 CDCA8Q53HL2 280 aa17.52■□□□□ 0.4
CBX1-206ENST00000581003 CCDC125Q86Z20 511 aa17.52■□□□□ 0.4
CBX1-206ENST00000581003 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
CBX1-206ENST00000581003 TRIM37O94972 964 aa17.51■□□□□ 0.39
CBX1-206ENST00000581003 PDE3BQ13370 1112 aa17.51■□□□□ 0.39
CBX1-206ENST00000581003 CARD10Q9BWT7 1032 aa17.51■□□□□ 0.39
CBX1-206ENST00000581003 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
CBX1-206ENST00000581003 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
CBX1-206ENST00000581003 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
CBX1-206ENST00000581003 HOXC9P31274 260 aa17.48■□□□□ 0.39
CBX1-206ENST00000581003 SF3B2Q13435 895 aaKnown RBP17.48■□□□□ 0.39
CBX1-206ENST00000581003 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
CBX1-206ENST00000581003 IP6K1Q92551 441 aa17.48■□□□□ 0.39
CBX1-206ENST00000581003 DDB1Q16531 1140 aa17.47■□□□□ 0.39
CBX1-206ENST00000581003 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
CBX1-206ENST00000581003 MARCH10Q8NA82 808 aaPredicted RBP17.47■□□□□ 0.39
CBX1-206ENST00000581003 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
CBX1-206ENST00000581003 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
CBX1-206ENST00000581003 CCDC7Q96M83 1385 aa17.46■□□□□ 0.39
CBX1-206ENST00000581003 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
CBX1-206ENST00000581003 TNS2Q63HR2 1409 aa17.46■□□□□ 0.39
CBX1-206ENST00000581003 AMPHP49418 695 aa17.45■□□□□ 0.38
CBX1-206ENST00000581003 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
CBX1-206ENST00000581003 BAG6P46379 1132 aa17.44■□□□□ 0.38
CBX1-206ENST00000581003 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
CBX1-206ENST00000581003 PANK3Q9H999 370 aa17.43■□□□□ 0.38
CBX1-206ENST00000581003 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
CBX1-206ENST00000581003 RTL1A6NKG5 1358 aa17.42■□□□□ 0.38
CBX1-206ENST00000581003 APBA3O96018 575 aa17.42■□□□□ 0.38
CBX1-206ENST00000581003 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
CBX1-206ENST00000581003 USHBP1Q8N6Y0 703 aa17.42■□□□□ 0.38
CBX1-206ENST00000581003 SBF2Q86WG5 1849 aa17.41■□□□□ 0.38
CBX1-206ENST00000581003 MEGF6O75095 1541 aa17.41■□□□□ 0.38
CBX1-206ENST00000581003 PSDA5PKW4 1024 aaPredicted RBP17.4■□□□□ 0.38
CBX1-206ENST00000581003 IL2RBP14784 551 aa17.4■□□□□ 0.38
CBX1-206ENST00000581003 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
CBX1-206ENST00000581003 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
CBX1-206ENST00000581003 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
CBX1-206ENST00000581003 RREB1Q92766 1687 aa17.39■□□□□ 0.37
CBX1-206ENST00000581003 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
CBX1-206ENST00000581003 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
CBX1-206ENST00000581003 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
CBX1-206ENST00000581003 EXOC5O00471 708 aa17.38■□□□□ 0.37
CBX1-206ENST00000581003 NBPF6Q5VWK0 638 aa17.38■□□□□ 0.37
CBX1-206ENST00000581003 NBPF4Q96M43 638 aa17.38■□□□□ 0.37
CBX1-206ENST00000581003 SRCAPQ6ZRS2 3230 aa17.38■□□□□ 0.37
CBX1-206ENST00000581003 FLT4P35916 1363 aa17.38■□□□□ 0.37
CBX1-206ENST00000581003 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
CBX1-206ENST00000581003 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
CBX1-206ENST00000581003 KCNQ2O43526 872 aa17.37■□□□□ 0.37
CBX1-206ENST00000581003 INSRP06213 1382 aa17.37■□□□□ 0.37
CBX1-206ENST00000581003 ACSBG1Q96GR2 724 aa17.36■□□□□ 0.37
CBX1-206ENST00000581003 BCL9O00512 1426 aa17.35■□□□□ 0.37
CBX1-206ENST00000581003 NHSQ6T4R5 1651 aa17.35■□□□□ 0.37
CBX1-206ENST00000581003 R3HDM1Q15032 1099 aaKnown RBP17.34■□□□□ 0.37
CBX1-206ENST00000581003 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
CBX1-206ENST00000581003 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.36
CBX1-206ENST00000581003 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
CBX1-206ENST00000581003 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
CBX1-206ENST00000581003 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
CBX1-206ENST00000581003 KIF24Q5T7B8 1368 aa17.31■□□□□ 0.36
CBX1-206ENST00000581003 MAP2P11137 1827 aaKnown RBP17.31■□□□□ 0.36
CBX1-206ENST00000581003 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
CBX1-206ENST00000581003 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
CBX1-206ENST00000581003 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms