RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GCP02774 474 aa14.16□□□□□ -0.14
CCDC47-203ENST00000580986 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
CCDC47-203ENST00000580986 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
CCDC47-203ENST00000580986 RALBP1Q15311 655 aa14.15□□□□□ -0.14
CCDC47-203ENST00000580986 RTL1A6NKG5 1358 aa14.14□□□□□ -0.15
CCDC47-203ENST00000580986 LTN1O94822 1766 aa14.14□□□□□ -0.15
CCDC47-203ENST00000580986 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
CCDC47-203ENST00000580986 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
CCDC47-203ENST00000580986 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
CCDC47-203ENST00000580986 COL14A1Q05707 1796 aaKnown RBP14.13□□□□□ -0.15
CCDC47-203ENST00000580986 LMO7Q8WWI1 1683 aa14.13□□□□□ -0.15
CCDC47-203ENST00000580986 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
CCDC47-203ENST00000580986 NUTM2GQ5VZR2 741 aa14.12□□□□□ -0.15
CCDC47-203ENST00000580986 ARHGEF25Q86VW2 580 aa14.12□□□□□ -0.15
CCDC47-203ENST00000580986 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
CCDC47-203ENST00000580986 MAP2P11137 1827 aaKnown RBP14.12□□□□□ -0.15
CCDC47-203ENST00000580986 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
CCDC47-203ENST00000580986 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
CCDC47-203ENST00000580986 COL18A1P39060 1754 aa14.11□□□□□ -0.15
CCDC47-203ENST00000580986 BLMP54132 1417 aaPredicted RBP14.11□□□□□ -0.15
CCDC47-203ENST00000580986 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
CCDC47-203ENST00000580986 LRP6O75581 1613 aa14.11□□□□□ -0.15
CCDC47-203ENST00000580986 INSRP06213 1382 aa14.1□□□□□ -0.15
CCDC47-203ENST00000580986 FLT4P35916 1363 aa14.09□□□□□ -0.15
CCDC47-203ENST00000580986 HAP1P54257 671 aaPredicted RBP14.09□□□□□ -0.15
CCDC47-203ENST00000580986 CABLES1Q8TDN4 633 aa14.09□□□□□ -0.15
CCDC47-203ENST00000580986 PEAK1Q9H792 1746 aa14.09□□□□□ -0.15
CCDC47-203ENST00000580986 MAP3K19Q56UN5 1328 aa14.09□□□□□ -0.15
CCDC47-203ENST00000580986 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
CCDC47-203ENST00000580986 PLCH1Q4KWH8 1693 aa14.08□□□□□ -0.16
CCDC47-203ENST00000580986 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
CCDC47-203ENST00000580986 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.08□□□□□ -0.16
CCDC47-203ENST00000580986 ANP32CO43423 234 aa14.08□□□□□ -0.16
CCDC47-203ENST00000580986 DIEXFQ68CQ4 756 aaKnown RBP14.08□□□□□ -0.16
CCDC47-203ENST00000580986 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
CCDC47-203ENST00000580986 SLIT2O94813 1529 aa14.08□□□□□ -0.16
CCDC47-203ENST00000580986 MYBBP1AQ9BQG0 1328 aaKnown RBP14.08□□□□□ -0.16
CCDC47-203ENST00000580986 PRKAR2AP13861 404 aaKnown RBP14.06□□□□□ -0.16
CCDC47-203ENST00000580986 PPP2R1AP30153 589 aa14.06□□□□□ -0.16
CCDC47-203ENST00000580986 IP6K1Q92551 441 aa14.06□□□□□ -0.16
CCDC47-203ENST00000580986 PRDM11Q9NQV5 511 aa14.06□□□□□ -0.16
CCDC47-203ENST00000580986 NRAPQ86VF7 1730 aa14.06□□□□□ -0.16
CCDC47-203ENST00000580986 ZC3H6P61129 1189 aaKnown RBP14.05□□□□□ -0.16
CCDC47-203ENST00000580986 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
CCDC47-203ENST00000580986 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
CCDC47-203ENST00000580986 CAMTA1Q9Y6Y1 1673 aa14.04□□□□□ -0.16
CCDC47-203ENST00000580986 HOXC9P31274 260 aa14.04□□□□□ -0.16
CCDC47-203ENST00000580986 RRS1Q15050 365 aaKnown RBP14.04□□□□□ -0.16
CCDC47-203ENST00000580986 FNBP4Q8N3X1 1017 aaPredicted RBP14.04□□□□□ -0.16
CCDC47-203ENST00000580986 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
CCDC47-203ENST00000580986 COL5A2P05997 1499 aaPredicted RBP14.04□□□□□ -0.16
CCDC47-203ENST00000580986 AMPHP49418 695 aa14.03□□□□□ -0.16
CCDC47-203ENST00000580986 MTHFSP49914 203 aa14.03□□□□□ -0.16
CCDC47-203ENST00000580986 EVX2Q03828 476 aa14.03□□□□□ -0.16
CCDC47-203ENST00000580986 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
CCDC47-203ENST00000580986 RGPD5Q99666 1765 aa14.02□□□□□ -0.16
CCDC47-203ENST00000580986 ERBB3P21860 1342 aa14.02□□□□□ -0.17
CCDC47-203ENST00000580986 FAM83GA6ND36 823 aa14.02□□□□□ -0.17
CCDC47-203ENST00000580986 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
CCDC47-203ENST00000580986 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
CCDC47-203ENST00000580986 SOX12O15370 315 aa14.02□□□□□ -0.17
CCDC47-203ENST00000580986 TNNT2P45379 298 aaPredicted RBP14.02□□□□□ -0.17
CCDC47-203ENST00000580986 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
CCDC47-203ENST00000580986 RGPD1P0DJD0 1748 aa14.01□□□□□ -0.17
CCDC47-203ENST00000580986 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
CCDC47-203ENST00000580986 PLEKHG2Q9H7P9 1386 aa14.01□□□□□ -0.17
CCDC47-203ENST00000580986 ADAMTS2O95450 1211 aa14.01□□□□□ -0.17
CCDC47-203ENST00000580986 FBLN1P23142 703 aa14.01□□□□□ -0.17
CCDC47-203ENST00000580986 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
CCDC47-203ENST00000580986 BCL9LQ86UU0 1499 aa14□□□□□ -0.17
CCDC47-203ENST00000580986 WDR17Q8IZU2 1322 aa13.99□□□□□ -0.17
CCDC47-203ENST00000580986 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
CCDC47-203ENST00000580986 AXIN2Q9Y2T1 843 aa13.99□□□□□ -0.17
CCDC47-203ENST00000580986 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
CCDC47-203ENST00000580986 HSP90AB2PQ58FF8 381 aa13.98□□□□□ -0.17
CCDC47-203ENST00000580986 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
CCDC47-203ENST00000580986 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
CCDC47-203ENST00000580986 C8orf37Q96NL8 207 aa13.98□□□□□ -0.17
CCDC47-203ENST00000580986 BTG4Q9NY30 223 aa13.98□□□□□ -0.17
CCDC47-203ENST00000580986 CRB1P82279 1406 aa13.98□□□□□ -0.17
CCDC47-203ENST00000580986 CCER2I3L3R5 266 aa13.97□□□□□ -0.17
CCDC47-203ENST00000580986 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
CCDC47-203ENST00000580986 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
CCDC47-203ENST00000580986 UNC5CLQ8IV45 518 aa13.97□□□□□ -0.17
CCDC47-203ENST00000580986 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
CCDC47-203ENST00000580986 EIF4A2Q14240 407 aaKnown RBP13.96□□□□□ -0.17
CCDC47-203ENST00000580986 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.17
CCDC47-203ENST00000580986 ATRNO75882 1429 aa13.96□□□□□ -0.18
CCDC47-203ENST00000580986 KDRP35968 1356 aa13.96□□□□□ -0.18
CCDC47-203ENST00000580986 AFF2P51816 1311 aa13.95□□□□□ -0.18
CCDC47-203ENST00000580986 IGSF1Q8N6C5 1336 aa13.95□□□□□ -0.18
CCDC47-203ENST00000580986 IL13P35225 146 aa13.95□□□□□ -0.18
CCDC47-203ENST00000580986 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
CCDC47-203ENST00000580986 VPS72Q15906 364 aa13.94□□□□□ -0.18
CCDC47-203ENST00000580986 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
CCDC47-203ENST00000580986 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
CCDC47-203ENST00000580986 USP21Q9UK80 565 aa13.94□□□□□ -0.18
CCDC47-203ENST00000580986 NUDCQ9Y266 331 aa13.94□□□□□ -0.18
CCDC47-203ENST00000580986 THRAP3Q9Y2W1 955 aaKnown RBP13.94□□□□□ -0.18
CCDC47-203ENST00000580986 ZBTB7CA1YPR0 619 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms