RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-217ENST00000580654 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
SMARCE1-217ENST00000580654 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
SMARCE1-217ENST00000580654 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
SMARCE1-217ENST00000580654 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
SMARCE1-217ENST00000580654 SAFB2Q14151 953 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMARCE1-217ENST00000580654 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
SMARCE1-217ENST00000580654 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-217ENST00000580654 GPRASP1Q5JY77 1395 aa11.67□□□□□ -0.54
SMARCE1-217ENST00000580654 PRAM1Q96QH2 718 aa11.67□□□□□ -0.54
SMARCE1-217ENST00000580654 PLSCR1O15162 318 aa11.66□□□□□ -0.54
SMARCE1-217ENST00000580654 LARP1Q6PKG0 1096 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-217ENST00000580654 PTF1AQ7RTS3 328 aa11.66□□□□□ -0.54
SMARCE1-217ENST00000580654 PROM2Q8N271 834 aa11.66□□□□□ -0.54
SMARCE1-217ENST00000580654 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
SMARCE1-217ENST00000580654 C14orf93Q9H972 538 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-217ENST00000580654 SHANK3Q9BYB0 1731 aa11.66□□□□□ -0.54
SMARCE1-217ENST00000580654 DLC1Q96QB1 1528 aa11.65□□□□□ -0.54
SMARCE1-217ENST00000580654 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.54
SMARCE1-217ENST00000580654 LRRC37A3O60309 1634 aa11.65□□□□□ -0.54
SMARCE1-217ENST00000580654 ZC3H6P61129 1189 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-217ENST00000580654 CFAP70Q5T0N1 1121 aa11.64□□□□□ -0.55
SMARCE1-217ENST00000580654 TCP11L2Q8N4U5 519 aa11.64□□□□□ -0.55
SMARCE1-217ENST00000580654 OTUD5Q96G74 571 aa11.64□□□□□ -0.55
SMARCE1-217ENST00000580654 DHX57Q6P158 1386 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-217ENST00000580654 OVOS2A0A0G2JMS6 1433 aa11.63□□□□□ -0.55
SMARCE1-217ENST00000580654 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
SMARCE1-217ENST00000580654 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
SMARCE1-217ENST00000580654 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-217ENST00000580654 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-217ENST00000580654 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-217ENST00000580654 ATP7BP35670 1465 aa11.63□□□□□ -0.55
SMARCE1-217ENST00000580654 EVA1CP58658 441 aa11.62□□□□□ -0.55
SMARCE1-217ENST00000580654 ITSN1Q15811 1721 aa11.61□□□□□ -0.55
SMARCE1-217ENST00000580654 WNK3Q9BYP7 1800 aa11.61□□□□□ -0.55
SMARCE1-217ENST00000580654 NUTM2GQ5VZR2 741 aa11.61□□□□□ -0.55
SMARCE1-217ENST00000580654 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
SMARCE1-217ENST00000580654 COL5A2P05997 1499 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-217ENST00000580654 MAP3K5Q99683 1374 aa11.6□□□□□ -0.55
SMARCE1-217ENST00000580654 POTEMA6NI47 508 aa11.6□□□□□ -0.55
SMARCE1-217ENST00000580654 NGDNQ8NEJ9 315 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-217ENST00000580654 BCL11BQ9C0K0 894 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-217ENST00000580654 POGKQ9P215 609 aa11.6□□□□□ -0.55
SMARCE1-217ENST00000580654 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-217ENST00000580654 AKAP12Q02952 1782 aa11.59□□□□□ -0.55
SMARCE1-217ENST00000580654 SLC15A2Q16348 729 aa11.59□□□□□ -0.55
SMARCE1-217ENST00000580654 MTFR1LQ9H019 292 aa11.59□□□□□ -0.55
SMARCE1-217ENST00000580654 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-217ENST00000580654 CPDO75976 1380 aa11.58□□□□□ -0.56
SMARCE1-217ENST00000580654 EIF3AQ14152 1382 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-217ENST00000580654 PAPPAQ13219 1627 aa11.58□□□□□ -0.56
SMARCE1-217ENST00000580654 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-217ENST00000580654 WASLO00401 505 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-217ENST00000580654 GOLGB1Q14789 3259 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-217ENST00000580654 TOPAZ1Q8N9V7 1692 aa11.57□□□□□ -0.56
SMARCE1-217ENST00000580654 TXNRD1Q16881 649 aa11.57□□□□□ -0.56
SMARCE1-217ENST00000580654 ARXQ96QS3 562 aa11.57□□□□□ -0.56
SMARCE1-217ENST00000580654 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
SMARCE1-217ENST00000580654 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
SMARCE1-217ENST00000580654 BCL9O00512 1426 aa11.56□□□□□ -0.56
SMARCE1-217ENST00000580654 CRB1P82279 1406 aa11.56□□□□□ -0.56
SMARCE1-217ENST00000580654 PPARGC1BQ86YN6 1023 aaKnown RBP11.56□□□□□ -0.56
SMARCE1-217ENST00000580654 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-217ENST00000580654 GPR162Q16538 588 aa11.55□□□□□ -0.56
SMARCE1-217ENST00000580654 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
SMARCE1-217ENST00000580654 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-217ENST00000580654 TRAK1Q9UPV9 953 aa11.55□□□□□ -0.56
SMARCE1-217ENST00000580654 USP19O94966 1318 aa11.55□□□□□ -0.56
SMARCE1-217ENST00000580654 COL18A1P39060 1754 aa11.54□□□□□ -0.56
SMARCE1-217ENST00000580654 POTEB2H3BUK9 544 aa11.54□□□□□ -0.56
SMARCE1-217ENST00000580654 DDB1Q16531 1140 aa11.54□□□□□ -0.56
SMARCE1-217ENST00000580654 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-217ENST00000580654 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
SMARCE1-217ENST00000580654 ARHGEF28Q8N1W1 1705 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-217ENST00000580654 NUDT16Q96DE0 195 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-217ENST00000580654 NHSQ6T4R5 1651 aa11.52□□□□□ -0.57
SMARCE1-217ENST00000580654 ACEP12821 1306 aa11.51□□□□□ -0.57
SMARCE1-217ENST00000580654 QSER1Q2KHR3 1735 aa11.51□□□□□ -0.57
SMARCE1-217ENST00000580654 RGPD5Q99666 1765 aa11.5□□□□□ -0.57
SMARCE1-217ENST00000580654 GCP02774 474 aa11.5□□□□□ -0.57
SMARCE1-217ENST00000580654 ABTB2Q8N961 1025 aa11.5□□□□□ -0.57
SMARCE1-217ENST00000580654 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
SMARCE1-217ENST00000580654 HSPA6P17066 643 aa11.49□□□□□ -0.57
SMARCE1-217ENST00000580654 ZNF827Q17R98 1081 aa11.49□□□□□ -0.57
SMARCE1-217ENST00000580654 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
SMARCE1-217ENST00000580654 MPHOSPH9Q99550 1183 aa11.49□□□□□ -0.57
SMARCE1-217ENST00000580654 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
SMARCE1-217ENST00000580654 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
SMARCE1-217ENST00000580654 YBX3P16989 372 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■□□□ 12.5
SMARCE1-217ENST00000580654 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
SMARCE1-217ENST00000580654 SLIT3O75094 1523 aa11.48□□□□□ -0.57
SMARCE1-217ENST00000580654 BTAF1O14981 1849 aa11.48□□□□□ -0.57
SMARCE1-217ENST00000580654 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
SMARCE1-217ENST00000580654 TOM1L2Q6ZVM7 507 aa11.47□□□□□ -0.57
SMARCE1-217ENST00000580654 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
SMARCE1-217ENST00000580654 CDK19Q9BWU1 502 aa11.46□□□□□ -0.57
SMARCE1-217ENST00000580654 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
SMARCE1-217ENST00000580654 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
SMARCE1-217ENST00000580654 WDR17Q8IZU2 1322 aa11.45□□□□□ -0.58
SMARCE1-217ENST00000580654 ZBTB7CA1YPR0 619 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms