RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 TOM1L2Q6ZVM7 507 aa16.37■□□□□ 0.21
ERBB2-210ENST00000580074 CDCA7Q9BWT1 371 aaPredicted RBP16.37■□□□□ 0.21
ERBB2-210ENST00000580074 WDR17Q8IZU2 1322 aa16.37■□□□□ 0.21
ERBB2-210ENST00000580074 NFAT5O94916 1531 aa16.36■□□□□ 0.21
ERBB2-210ENST00000580074 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
ERBB2-210ENST00000580074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
ERBB2-210ENST00000580074 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
ERBB2-210ENST00000580074 WNK3Q9BYP7 1800 aa16.35■□□□□ 0.21
ERBB2-210ENST00000580074 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
ERBB2-210ENST00000580074 COL18A1P39060 1754 aa16.35■□□□□ 0.21
ERBB2-210ENST00000580074 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
ERBB2-210ENST00000580074 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
ERBB2-210ENST00000580074 TNS1Q9HBL0 1735 aaKnown RBP16.34■□□□□ 0.21
ERBB2-210ENST00000580074 SOX12O15370 315 aa16.34■□□□□ 0.21
ERBB2-210ENST00000580074 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
ERBB2-210ENST00000580074 CCDC7Q96M83 1385 aa16.34■□□□□ 0.21
ERBB2-210ENST00000580074 DEFB132Q7Z7B7 95 aa16.33■□□□□ 0.2
ERBB2-210ENST00000580074 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
ERBB2-210ENST00000580074 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
ERBB2-210ENST00000580074 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
ERBB2-210ENST00000580074 OVOS2A0A0J9YW53 1432 aa16.33■□□□□ 0.2
ERBB2-210ENST00000580074 OVOS2Q6IE36 1432 aa16.33■□□□□ 0.2
ERBB2-210ENST00000580074 LRRC37A3O60309 1634 aa16.32■□□□□ 0.2
ERBB2-210ENST00000580074 LTN1O94822 1766 aa16.32■□□□□ 0.2
ERBB2-210ENST00000580074 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
ERBB2-210ENST00000580074 DDB1Q16531 1140 aa16.31■□□□□ 0.2
ERBB2-210ENST00000580074 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
ERBB2-210ENST00000580074 NME9Q86XW9 330 aa16.3■□□□□ 0.2
ERBB2-210ENST00000580074 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
ERBB2-210ENST00000580074 RGPD5Q99666 1765 aa16.3■□□□□ 0.2
ERBB2-210ENST00000580074 COG3Q96JB2 828 aa16.29■□□□□ 0.2
ERBB2-210ENST00000580074 TRIM37O94972 964 aa16.28■□□□□ 0.2
ERBB2-210ENST00000580074 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
ERBB2-210ENST00000580074 ERBB3P21860 1342 aa16.26■□□□□ 0.19
ERBB2-210ENST00000580074 APBA3O96018 575 aa16.26■□□□□ 0.19
ERBB2-210ENST00000580074 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
ERBB2-210ENST00000580074 AXIN2Q9Y2T1 843 aa16.26■□□□□ 0.19
ERBB2-210ENST00000580074 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
ERBB2-210ENST00000580074 RGPD3A6NKT7 1758 aaPredicted RBP16.25■□□□□ 0.19
ERBB2-210ENST00000580074 RGPD4Q7Z3J3 1758 aa16.25■□□□□ 0.19
ERBB2-210ENST00000580074 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
ERBB2-210ENST00000580074 EP400Q96L91 3159 aa16.24■□□□□ 0.19
ERBB2-210ENST00000580074 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
ERBB2-210ENST00000580074 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
ERBB2-210ENST00000580074 BCL9O00512 1426 aa16.23■□□□□ 0.19
ERBB2-210ENST00000580074 EXOC5O00471 708 aa16.23■□□□□ 0.19
ERBB2-210ENST00000580074 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
ERBB2-210ENST00000580074 RREB1Q92766 1687 aa16.23■□□□□ 0.19
ERBB2-210ENST00000580074 LRP5O75197 1615 aa16.23■□□□□ 0.19
ERBB2-210ENST00000580074 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
ERBB2-210ENST00000580074 NBPF14Q5TI25 921 aa16.22■□□□□ 0.19
ERBB2-210ENST00000580074 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
ERBB2-210ENST00000580074 MYOM1P52179 1685 aa16.21■□□□□ 0.18
ERBB2-210ENST00000580074 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
ERBB2-210ENST00000580074 IL2RBP14784 551 aa16.2■□□□□ 0.18
ERBB2-210ENST00000580074 AMPHP49418 695 aa16.2■□□□□ 0.18
ERBB2-210ENST00000580074 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.18
ERBB2-210ENST00000580074 EZH2Q15910 746 aaKnown RBP16.2■□□□□ 0.18
ERBB2-210ENST00000580074 IP6K1Q92551 441 aa16.2■□□□□ 0.18
ERBB2-210ENST00000580074 CAMKK2Q96RR4 588 aa16.19■□□□□ 0.18
ERBB2-210ENST00000580074 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
ERBB2-210ENST00000580074 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
ERBB2-210ENST00000580074 BCL11BQ9C0K0 894 aaPredicted RBP16.18■□□□□ 0.18
ERBB2-210ENST00000580074 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
ERBB2-210ENST00000580074 PSDA5PKW4 1024 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-210ENST00000580074 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
ERBB2-210ENST00000580074 NHSQ6T4R5 1651 aa16.15■□□□□ 0.18
ERBB2-210ENST00000580074 PLSCR1O15162 318 aa16.15■□□□□ 0.18
ERBB2-210ENST00000580074 HOXC9P31274 260 aa16.15■□□□□ 0.18
ERBB2-210ENST00000580074 MARCH10Q8NA82 808 aaPredicted RBP16.15■□□□□ 0.18
ERBB2-210ENST00000580074 CGNL1Q0VF96 1302 aa16.15■□□□□ 0.18
ERBB2-210ENST00000580074 FYB1O15117 783 aa16.14■□□□□ 0.17
ERBB2-210ENST00000580074 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
ERBB2-210ENST00000580074 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
ERBB2-210ENST00000580074 FLT4P35916 1363 aa16.13■□□□□ 0.17
ERBB2-210ENST00000580074 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
ERBB2-210ENST00000580074 LTV1Q96GA3 475 aaPredicted RBP16.13■□□□□ 0.17
ERBB2-210ENST00000580074 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
ERBB2-210ENST00000580074 INSRP06213 1382 aa16.11■□□□□ 0.17
ERBB2-210ENST00000580074 CARD14Q9BXL6 1004 aa16.1■□□□□ 0.17
ERBB2-210ENST00000580074 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
ERBB2-210ENST00000580074 RRS1Q15050 365 aaKnown RBP16.09■□□□□ 0.17
ERBB2-210ENST00000580074 RAPGEF4Q8WZA2 1011 aa16.09■□□□□ 0.17
ERBB2-210ENST00000580074 NSD2O96028 1365 aa16.08■□□□□ 0.16
ERBB2-210ENST00000580074 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
ERBB2-210ENST00000580074 BTAF1O14981 1849 aa16.06■□□□□ 0.16
ERBB2-210ENST00000580074 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
ERBB2-210ENST00000580074 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
ERBB2-210ENST00000580074 STK32BQ9NY57 414 aa16.06■□□□□ 0.16
ERBB2-210ENST00000580074 RGPD2P0DJD1 1756 aa16.05■□□□□ 0.16
ERBB2-210ENST00000580074 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
ERBB2-210ENST00000580074 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
ERBB2-210ENST00000580074 TXNRD1Q16881 649 aa16.04■□□□□ 0.16
ERBB2-210ENST00000580074 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
ERBB2-210ENST00000580074 SPON1Q9HCB6 807 aa16.04■□□□□ 0.16
ERBB2-210ENST00000580074 DOT1LQ8TEK3 1739 aa16.04■□□□□ 0.16
ERBB2-210ENST00000580074 MEGF6O75095 1541 aa16.04■□□□□ 0.16
ERBB2-210ENST00000580074 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
ERBB2-210ENST00000580074 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
ERBB2-210ENST00000580074 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms