RNA–Protein interactions for RNA: ENST00000579146.5

PGAP3-206, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-206ENST00000579146 OVOS2A0A0J9YW53 1432 aa24.38■■□□□ 1.49
PGAP3-206ENST00000579146 OVOS2Q6IE36 1432 aa24.38■■□□□ 1.49
PGAP3-206ENST00000579146 FTSJ3Q8IY81 847 aaKnown RBP24.38■■□□□ 1.49
PGAP3-206ENST00000579146 TRIM27P14373 513 aa24.36■■□□□ 1.49
PGAP3-206ENST00000579146 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
PGAP3-206ENST00000579146 ATF7IPQ6VMQ6 1270 aa24.35■■□□□ 1.49
PGAP3-206ENST00000579146 SSH2Q76I76 1423 aa24.34■■□□□ 1.49
PGAP3-206ENST00000579146 DLG5Q8TDM6 1919 aa24.34■■□□□ 1.49
PGAP3-206ENST00000579146 CALD1Q05682 793 aaKnown RBP24.34■■□□□ 1.49
PGAP3-206ENST00000579146 ALDH1L2Q3SY69 923 aa24.33■■□□□ 1.49
PGAP3-206ENST00000579146 NOB1Q9ULX3 412 aaKnown RBP24.33■■□□□ 1.49
PGAP3-206ENST00000579146 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
PGAP3-206ENST00000579146 THUMPD2Q9BTF0 503 aaKnown RBP24.32■■□□□ 1.48
PGAP3-206ENST00000579146 KIF16BQ96L93 1317 aa24.32■■□□□ 1.48
PGAP3-206ENST00000579146 LAS1LQ9Y4W2 734 aaKnown RBP24.31■■□□□ 1.48
PGAP3-206ENST00000579146 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
PGAP3-206ENST00000579146 ZNF428Q96B54 188 aa24.31■■□□□ 1.48
PGAP3-206ENST00000579146 USP31Q70CQ4 1352 aa24.3■■□□□ 1.48
PGAP3-206ENST00000579146 RWDD1Q9H446 243 aaPredicted RBP24.3■■□□□ 1.48
PGAP3-206ENST00000579146 IFT57Q9NWB7 429 aa24.3■■□□□ 1.48
PGAP3-206ENST00000579146 GNAI1P63096 354 aa24.3■■□□□ 1.48
PGAP3-206ENST00000579146 EIF4A2Q14240 407 aaKnown RBP24.3■■□□□ 1.48
PGAP3-206ENST00000579146 ZNF853P0CG23 659 aa24.29■■□□□ 1.48
PGAP3-206ENST00000579146 DDX19BQ9UMR2 479 aa24.29■■□□□ 1.48
PGAP3-206ENST00000579146 VIRMAQ69YN4 1812 aaKnown RBP24.29■■□□□ 1.48
PGAP3-206ENST00000579146 PEAK1Q9H792 1746 aa24.29■■□□□ 1.48
PGAP3-206ENST00000579146 RGPD8O14715 1765 aaPredicted RBP24.29■■□□□ 1.48
PGAP3-206ENST00000579146 LMOD3Q0VAK6 560 aa24.29■■□□□ 1.48
PGAP3-206ENST00000579146 IPO8O15397 1037 aaKnown RBP24.28■■□□□ 1.48
PGAP3-206ENST00000579146 BRPF1P55201 1214 aaPredicted RBP24.27■■□□□ 1.48
PGAP3-206ENST00000579146 TTC21AQ8NDW8 1320 aa24.27■■□□□ 1.48
PGAP3-206ENST00000579146 CEP170BQ9Y4F5 1589 aaPredicted RBP24.27■■□□□ 1.48
PGAP3-206ENST00000579146 ITPRIPQ8IWB1 547 aa24.27■■□□□ 1.48
PGAP3-206ENST00000579146 MBIPQ9NS73 344 aa24.26■■□□□ 1.47
PGAP3-206ENST00000579146 RIMS1Q86UR5 1692 aaKnown RBP24.25■■□□□ 1.47
PGAP3-206ENST00000579146 VAMP4O75379 141 aa24.25■■□□□ 1.47
PGAP3-206ENST00000579146 DDRGK1Q96HY6 314 aa24.25■■□□□ 1.47
PGAP3-206ENST00000579146 AEBP1Q8IUX7 1158 aa24.25■■□□□ 1.47
PGAP3-206ENST00000579146 TMEM57Q8N5G2 664 aa24.25■■□□□ 1.47
PGAP3-206ENST00000579146 CFAP44Q96MT7 982 aa24.25■■□□□ 1.47
PGAP3-206ENST00000579146 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
PGAP3-206ENST00000579146 SULT6B1Q6IMI4 303 aa24.24■■□□□ 1.47
PGAP3-206ENST00000579146 PDZRN3Q9UPQ7 1066 aa24.24■■□□□ 1.47
PGAP3-206ENST00000579146 HSP90AB2PQ58FF8 381 aa24.23■■□□□ 1.47
PGAP3-206ENST00000579146 PIK3R4Q99570 1358 aa24.23■■□□□ 1.47
PGAP3-206ENST00000579146 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
PGAP3-206ENST00000579146 KCNA6P17658 529 aa24.22■■□□□ 1.47
PGAP3-206ENST00000579146 TSPYL6Q8N831 410 aa24.22■■□□□ 1.47
PGAP3-206ENST00000579146 NGDNQ8NEJ9 315 aaKnown RBP24.22■■□□□ 1.47
PGAP3-206ENST00000579146 HDAC1Q13547 482 aaPredicted RBP24.21■■□□□ 1.47
PGAP3-206ENST00000579146 ANKARQ7Z5J8 1434 aa24.21■■□□□ 1.47
PGAP3-206ENST00000579146 ZBTB40Q9NUA8 1239 aa24.2■■□□□ 1.47
PGAP3-206ENST00000579146 MRPL50Q8N5N7 158 aaKnown RBP24.2■■□□□ 1.46
PGAP3-206ENST00000579146 FMN2Q9NZ56 1722 aa24.19■■□□□ 1.46
PGAP3-206ENST00000579146 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
PGAP3-206ENST00000579146 MAP3K19Q56UN5 1328 aa24.18■■□□□ 1.46
PGAP3-206ENST00000579146 SOX12O15370 315 aa24.18■■□□□ 1.46
PGAP3-206ENST00000579146 DCTN1Q14203 1278 aa24.18■■□□□ 1.46
PGAP3-206ENST00000579146 ARHGAP45Q92619 1136 aa24.18■■□□□ 1.46
PGAP3-206ENST00000579146 TWISTNBQ3B726 338 aaPredicted RBP24.17■■□□□ 1.46
PGAP3-206ENST00000579146 ELL2O00472 640 aaPredicted RBP24.16■■□□□ 1.46
PGAP3-206ENST00000579146 SBNO1A3KN83 1393 aa24.16■■□□□ 1.46
PGAP3-206ENST00000579146 C8orf58Q8NAV2 365 aa24.16■■□□□ 1.46
PGAP3-206ENST00000579146 FLT4P35916 1363 aa24.16■■□□□ 1.46
PGAP3-206ENST00000579146 ARHGEF10O15013 1369 aa24.14■■□□□ 1.46
PGAP3-206ENST00000579146 NBR1Q14596 966 aa24.14■■□□□ 1.45
PGAP3-206ENST00000579146 ZNF142P52746 1687 aaPredicted RBP24.13■■□□□ 1.45
PGAP3-206ENST00000579146 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
PGAP3-206ENST00000579146 SMC5Q8IY18 1101 aa24.12■■□□□ 1.45
PGAP3-206ENST00000579146 USP19O94966 1318 aa24.11■■□□□ 1.45
PGAP3-206ENST00000579146 SEC24BO95487 1268 aa24.1■■□□□ 1.45
PGAP3-206ENST00000579146 ANKLE2Q86XL3 938 aa24.1■■□□□ 1.45
PGAP3-206ENST00000579146 MARF1Q9Y4F3 1742 aaKnown RBP24.1■■□□□ 1.45
PGAP3-206ENST00000579146 ABCC4O15439 1325 aa24.1■■□□□ 1.45
PGAP3-206ENST00000579146 KDRP35968 1356 aa24.09■■□□□ 1.45
PGAP3-206ENST00000579146 USP54Q70EL1 1684 aa24.09■■□□□ 1.45
PGAP3-206ENST00000579146 CHL1O00533 1208 aa24.09■■□□□ 1.45
PGAP3-206ENST00000579146 ZBTB7BO15156 539 aaPredicted RBP24.09■■□□□ 1.45
PGAP3-206ENST00000579146 NLRP6P59044 892 aa24.09■■□□□ 1.45
PGAP3-206ENST00000579146 MCM10Q7L590 875 aa24.09■■□□□ 1.45
PGAP3-206ENST00000579146 AMPHP49418 695 aa24.08■■□□□ 1.45
PGAP3-206ENST00000579146 CHMP4BQ9H444 224 aaKnown RBP24.07■■□□□ 1.44
PGAP3-206ENST00000579146 IGSF1Q8N6C5 1336 aa24.06■■□□□ 1.44
PGAP3-206ENST00000579146 ADAMTSL3P82987 1691 aa24.06■■□□□ 1.44
PGAP3-206ENST00000579146 CRB1P82279 1406 aa24.05■■□□□ 1.44
PGAP3-206ENST00000579146 EYA1Q99502 592 aa24.05■■□□□ 1.44
PGAP3-206ENST00000579146 API5Q9BZZ5 524 aaKnown RBP24.04■■□□□ 1.44
PGAP3-206ENST00000579146 KIF24Q5T7B8 1368 aa24.04■■□□□ 1.44
PGAP3-206ENST00000579146 KIAA0232Q92628 1395 aa24.04■■□□□ 1.44
PGAP3-206ENST00000579146 SLC4A3P48751 1232 aa24.04■■□□□ 1.44
PGAP3-206ENST00000579146 MTHFSDQ2M296 383 aaKnown RBP24.04■■□□□ 1.44
PGAP3-206ENST00000579146 HAP1P54257 671 aaPredicted RBP24.03■■□□□ 1.44
PGAP3-206ENST00000579146 DAXXQ9UER7 740 aaPredicted RBP24.03■■□□□ 1.44
PGAP3-206ENST00000579146 FOXO3O43524 673 aa24.02■■□□□ 1.44
PGAP3-206ENST00000579146 KRT24Q2M2I5 525 aa24.02■■□□□ 1.44
PGAP3-206ENST00000579146 NUTM2GQ5VZR2 741 aa24.02■■□□□ 1.44
PGAP3-206ENST00000579146 ABTB2Q8N961 1025 aa24.02■■□□□ 1.44
PGAP3-206ENST00000579146 SETD1BQ9UPS6 1966 aaKnown RBP24.02■■□□□ 1.44
PGAP3-206ENST00000579146 HOXC9P31274 260 aa24.01■■□□□ 1.43
PGAP3-206ENST00000579146 NUCB1Q02818 461 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms