RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 PSDA5PKW4 1024 aaPredicted RBP24.67■■□□□ 1.54
SLC9A3R1-203ENST00000578958 EZH2Q15910 746 aaKnown RBP24.67■■□□□ 1.54
SLC9A3R1-203ENST00000578958 PUS7Q96PZ0 661 aaKnown RBP24.67■■□□□ 1.54
SLC9A3R1-203ENST00000578958 DDB1Q16531 1140 aa24.66■■□□□ 1.54
SLC9A3R1-203ENST00000578958 DISP2A7MBM2 1401 aa24.65■■□□□ 1.54
SLC9A3R1-203ENST00000578958 NME9Q86XW9 330 aa24.65■■□□□ 1.54
SLC9A3R1-203ENST00000578958 MON2Q7Z3U7 1717 aa24.64■■□□□ 1.54
SLC9A3R1-203ENST00000578958 CDCA7Q9BWT1 371 aaPredicted RBP24.64■■□□□ 1.54
SLC9A3R1-203ENST00000578958 EDC4Q6P2E9 1401 aaKnown RBP24.62■■□□□ 1.53
SLC9A3R1-203ENST00000578958 TNS1Q9HBL0 1735 aaKnown RBP24.62■■□□□ 1.53
SLC9A3R1-203ENST00000578958 CARD10Q9BWT7 1032 aa24.62■■□□□ 1.53
SLC9A3R1-203ENST00000578958 USP31Q70CQ4 1352 aa24.62■■□□□ 1.53
SLC9A3R1-203ENST00000578958 CAMKK2Q96RR4 588 aa24.61■■□□□ 1.53
SLC9A3R1-203ENST00000578958 CD163L1Q9NR16 1453 aa24.61■■□□□ 1.53
SLC9A3R1-203ENST00000578958 COL18A1P39060 1754 aa24.61■■□□□ 1.53
SLC9A3R1-203ENST00000578958 PARP4Q9UKK3 1724 aaKnown RBP24.61■■□□□ 1.53
SLC9A3R1-203ENST00000578958 A0A1W2PP64 1363 aa24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 PARD3Q8TEW0 1356 aa24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 NINLQ9Y2I6 1382 aa24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 R3HDM1Q15032 1099 aaKnown RBP24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 TESK2Q96S53 571 aa24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 OVOS2A0A0G2JMS6 1433 aa24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 OVOS2A0A0J9YW53 1432 aa24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 OVOS2Q6IE36 1432 aa24.6■■□□□ 1.53
SLC9A3R1-203ENST00000578958 NFAT5O94916 1531 aa24.59■■□□□ 1.53
SLC9A3R1-203ENST00000578958 TMF1P82094 1093 aa24.58■■□□□ 1.53
SLC9A3R1-203ENST00000578958 PCGF6Q9BYE7 350 aa24.58■■□□□ 1.53
SLC9A3R1-203ENST00000578958 EXOC5O00471 708 aa24.57■■□□□ 1.52
SLC9A3R1-203ENST00000578958 CCDC7Q96M83 1385 aa24.56■■□□□ 1.52
SLC9A3R1-203ENST00000578958 NBPF14Q5TI25 921 aa24.56■■□□□ 1.52
SLC9A3R1-203ENST00000578958 NLRP2Q9NX02 1062 aa24.56■■□□□ 1.52
SLC9A3R1-203ENST00000578958 RGPD5Q99666 1765 aa24.55■■□□□ 1.52
SLC9A3R1-203ENST00000578958 USP47Q96K76 1375 aa24.54■■□□□ 1.52
SLC9A3R1-203ENST00000578958 COG3Q96JB2 828 aa24.54■■□□□ 1.52
SLC9A3R1-203ENST00000578958 ABCC6O95255 1503 aa24.54■■□□□ 1.52
SLC9A3R1-203ENST00000578958 LRRC37A3O60309 1634 aa24.53■■□□□ 1.52
SLC9A3R1-203ENST00000578958 CDCA8Q53HL2 280 aa24.52■■□□□ 1.52
SLC9A3R1-203ENST00000578958 ERBB3P21860 1342 aa24.52■■□□□ 1.52
SLC9A3R1-203ENST00000578958 MARCH10Q8NA82 808 aaPredicted RBP24.51■■□□□ 1.51
SLC9A3R1-203ENST00000578958 ANKRD24Q8TF21 1146 aa24.51■■□□□ 1.51
SLC9A3R1-203ENST00000578958 TIMELESSQ9UNS1 1208 aa24.51■■□□□ 1.51
SLC9A3R1-203ENST00000578958 BCL11BQ9C0K0 894 aaPredicted RBP24.5■■□□□ 1.51
SLC9A3R1-203ENST00000578958 USP54Q70EL1 1684 aa24.5■■□□□ 1.51
SLC9A3R1-203ENST00000578958 WNK3Q9BYP7 1800 aa24.47■■□□□ 1.51
SLC9A3R1-203ENST00000578958 LTN1O94822 1766 aa24.47■■□□□ 1.51
SLC9A3R1-203ENST00000578958 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
SLC9A3R1-203ENST00000578958 CLSPNQ9HAW4 1339 aa24.47■■□□□ 1.51
SLC9A3R1-203ENST00000578958 IL2RBP14784 551 aa24.47■■□□□ 1.51
SLC9A3R1-203ENST00000578958 AMPHP49418 695 aa24.46■■□□□ 1.51
SLC9A3R1-203ENST00000578958 IP6K1Q92551 441 aa24.46■■□□□ 1.51
SLC9A3R1-203ENST00000578958 LTV1Q96GA3 475 aaPredicted RBP24.46■■□□□ 1.51
SLC9A3R1-203ENST00000578958 LRP5O75197 1615 aa24.46■■□□□ 1.51
SLC9A3R1-203ENST00000578958 PEAK1Q9H792 1746 aa24.45■■□□□ 1.5
SLC9A3R1-203ENST00000578958 PLSCR1O15162 318 aa24.45■■□□□ 1.5
SLC9A3R1-203ENST00000578958 TNS2Q63HR2 1409 aa24.43■■□□□ 1.5
SLC9A3R1-203ENST00000578958 RREB1Q92766 1687 aa24.42■■□□□ 1.5
SLC9A3R1-203ENST00000578958 BCL9O00512 1426 aa24.42■■□□□ 1.5
SLC9A3R1-203ENST00000578958 PTF1AQ7RTS3 328 aa24.4■■□□□ 1.5
SLC9A3R1-203ENST00000578958 NUP188Q5SRE5 1749 aa24.4■■□□□ 1.5
SLC9A3R1-203ENST00000578958 SBF2Q86WG5 1849 aa24.4■■□□□ 1.5
SLC9A3R1-203ENST00000578958 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.5
SLC9A3R1-203ENST00000578958 GGNBP2Q9H3C7 697 aa24.39■■□□□ 1.49
SLC9A3R1-203ENST00000578958 FBLN1P23142 703 aa24.38■■□□□ 1.49
SLC9A3R1-203ENST00000578958 HOXC9P31274 260 aa24.38■■□□□ 1.49
SLC9A3R1-203ENST00000578958 ACSBG1Q96GR2 724 aa24.38■■□□□ 1.49
SLC9A3R1-203ENST00000578958 FYB1O15117 783 aa24.37■■□□□ 1.49
SLC9A3R1-203ENST00000578958 CCER1Q8TC90 406 aaPredicted RBP24.36■■□□□ 1.49
SLC9A3R1-203ENST00000578958 KCNQ2O43526 872 aa24.35■■□□□ 1.49
SLC9A3R1-203ENST00000578958 RRS1Q15050 365 aaKnown RBP24.35■■□□□ 1.49
SLC9A3R1-203ENST00000578958 DDX54Q8TDD1 881 aaKnown RBP24.35■■□□□ 1.49
SLC9A3R1-203ENST00000578958 POLR3GLQ9BT43 218 aa24.34■■□□□ 1.49
SLC9A3R1-203ENST00000578958 RGPD3A6NKT7 1758 aaPredicted RBP24.34■■□□□ 1.49
SLC9A3R1-203ENST00000578958 RGPD4Q7Z3J3 1758 aa24.34■■□□□ 1.49
SLC9A3R1-203ENST00000578958 TXNRD1Q16881 649 aa24.33■■□□□ 1.49
SLC9A3R1-203ENST00000578958 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.49
SLC9A3R1-203ENST00000578958 SPON1Q9HCB6 807 aa24.32■■□□□ 1.48
SLC9A3R1-203ENST00000578958 RTL1A6NKG5 1358 aa24.31■■□□□ 1.48
SLC9A3R1-203ENST00000578958 SMG6Q86US8 1419 aaKnown RBP24.31■■□□□ 1.48
SLC9A3R1-203ENST00000578958 STK32BQ9NY57 414 aa24.31■■□□□ 1.48
SLC9A3R1-203ENST00000578958 FAM208AQ9UK61 1670 aaKnown RBP24.3■■□□□ 1.48
SLC9A3R1-203ENST00000578958 PROM2Q8N271 834 aa24.3■■□□□ 1.48
SLC9A3R1-203ENST00000578958 ANO8Q9HCE9 1232 aaPredicted RBP24.29■■□□□ 1.48
SLC9A3R1-203ENST00000578958 NSD3Q9BZ95 1437 aa24.27■■□□□ 1.48
SLC9A3R1-203ENST00000578958 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.47
SLC9A3R1-203ENST00000578958 ZCRB1Q8TBF4 217 aaKnown RBP24.26■■□□□ 1.47
SLC9A3R1-203ENST00000578958 SYTL4Q96C24 671 aaPredicted RBP24.26■■□□□ 1.47
SLC9A3R1-203ENST00000578958 NHSQ6T4R5 1651 aa24.26■■□□□ 1.47
SLC9A3R1-203ENST00000578958 KAT6BQ8WYB5 2073 aa24.26■■□□□ 1.47
SLC9A3R1-203ENST00000578958 RAPGEF4Q8WZA2 1011 aa24.25■■□□□ 1.47
SLC9A3R1-203ENST00000578958 CARD14Q9BXL6 1004 aa24.25■■□□□ 1.47
SLC9A3R1-203ENST00000578958 KIF20BQ96Q89 1820 aa24.24■■□□□ 1.47
SLC9A3R1-203ENST00000578958 PPM1GO15355 546 aaPredicted RBP24.23■■□□□ 1.47
SLC9A3R1-203ENST00000578958 SLC15A2Q16348 729 aa24.23■■□□□ 1.47
SLC9A3R1-203ENST00000578958 HSP90AB2PQ58FF8 381 aa24.23■■□□□ 1.47
SLC9A3R1-203ENST00000578958 NBPF6Q5VWK0 638 aa24.23■■□□□ 1.47
SLC9A3R1-203ENST00000578958 NBPF4Q96M43 638 aa24.23■■□□□ 1.47
SLC9A3R1-203ENST00000578958 FLT4P35916 1363 aa24.23■■□□□ 1.47
SLC9A3R1-203ENST00000578958 CGNL1Q0VF96 1302 aa24.22■■□□□ 1.47
SLC9A3R1-203ENST00000578958 USHBP1Q8N6Y0 703 aa24.22■■□□□ 1.47
SLC9A3R1-203ENST00000578958 INSRP06213 1382 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms