RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 CRB1P82279 1406 aa20.44■□□□□ 0.86
CCDC57-212ENST00000578910 COL18A1P39060 1754 aa20.44■□□□□ 0.86
CCDC57-212ENST00000578910 TRIM37O94972 964 aa20.44■□□□□ 0.86
CCDC57-212ENST00000578910 TMF1P82094 1093 aa20.44■□□□□ 0.86
CCDC57-212ENST00000578910 EN1Q05925 392 aaPredicted RBP20.44■□□□□ 0.86
CCDC57-212ENST00000578910 USP47Q96K76 1375 aa20.44■□□□□ 0.86
CCDC57-212ENST00000578910 MON2Q7Z3U7 1717 aa20.43■□□□□ 0.86
CCDC57-212ENST00000578910 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
CCDC57-212ENST00000578910 CSB-PGBD3P0DP91 1061 aa20.42■□□□□ 0.86
CCDC57-212ENST00000578910 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
CCDC57-212ENST00000578910 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
CCDC57-212ENST00000578910 CARD10Q9BWT7 1032 aa20.4■□□□□ 0.86
CCDC57-212ENST00000578910 NFAT5O94916 1531 aa20.39■□□□□ 0.85
CCDC57-212ENST00000578910 RGPD5Q99666 1765 aa20.39■□□□□ 0.85
CCDC57-212ENST00000578910 NINLQ9Y2I6 1382 aa20.38■□□□□ 0.85
CCDC57-212ENST00000578910 APBA3O96018 575 aa20.38■□□□□ 0.85
CCDC57-212ENST00000578910 DDB1Q16531 1140 aa20.38■□□□□ 0.85
CCDC57-212ENST00000578910 EZH2Q15910 746 aaKnown RBP20.37■□□□□ 0.85
CCDC57-212ENST00000578910 FBLN1P23142 703 aa20.36■□□□□ 0.85
CCDC57-212ENST00000578910 CAMKK2Q96RR4 588 aa20.36■□□□□ 0.85
CCDC57-212ENST00000578910 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
CCDC57-212ENST00000578910 COG3Q96JB2 828 aa20.35■□□□□ 0.85
CCDC57-212ENST00000578910 CDCA7Q9BWT1 371 aaPredicted RBP20.35■□□□□ 0.85
CCDC57-212ENST00000578910 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
CCDC57-212ENST00000578910 EXOC5O00471 708 aa20.33■□□□□ 0.85
CCDC57-212ENST00000578910 FYB1O15117 783 aa20.33■□□□□ 0.85
CCDC57-212ENST00000578910 MARCH10Q8NA82 808 aaPredicted RBP20.33■□□□□ 0.85
CCDC57-212ENST00000578910 NLRP2Q9NX02 1062 aa20.33■□□□□ 0.85
CCDC57-212ENST00000578910 RGPD1P0DJD0 1748 aa20.33■□□□□ 0.84
CCDC57-212ENST00000578910 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
CCDC57-212ENST00000578910 IP6K1Q92551 441 aa20.32■□□□□ 0.84
CCDC57-212ENST00000578910 OVOS2A0A0J9YW53 1432 aa20.32■□□□□ 0.84
CCDC57-212ENST00000578910 OVOS2Q6IE36 1432 aa20.32■□□□□ 0.84
CCDC57-212ENST00000578910 PARP4Q9UKK3 1724 aaKnown RBP20.32■□□□□ 0.84
CCDC57-212ENST00000578910 ERBB3P21860 1342 aa20.31■□□□□ 0.84
CCDC57-212ENST00000578910 PSDA5PKW4 1024 aaPredicted RBP20.31■□□□□ 0.84
CCDC57-212ENST00000578910 C11orf95C9JLR9 678 aaPredicted RBP20.31■□□□□ 0.84
CCDC57-212ENST00000578910 USP54Q70EL1 1684 aa20.31■□□□□ 0.84
CCDC57-212ENST00000578910 DISP2A7MBM2 1401 aa20.3■□□□□ 0.84
CCDC57-212ENST00000578910 GGNBP2Q9H3C7 697 aa20.3■□□□□ 0.84
CCDC57-212ENST00000578910 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
CCDC57-212ENST00000578910 LTV1Q96GA3 475 aaPredicted RBP20.28■□□□□ 0.84
CCDC57-212ENST00000578910 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
CCDC57-212ENST00000578910 MAP3K19Q56UN5 1328 aa20.27■□□□□ 0.84
CCDC57-212ENST00000578910 TNS1Q9HBL0 1735 aaKnown RBP20.27■□□□□ 0.84
CCDC57-212ENST00000578910 PTF1AQ7RTS3 328 aa20.27■□□□□ 0.84
CCDC57-212ENST00000578910 ABCC6O95255 1503 aa20.27■□□□□ 0.83
CCDC57-212ENST00000578910 LTN1O94822 1766 aa20.26■□□□□ 0.83
CCDC57-212ENST00000578910 AMPHP49418 695 aa20.26■□□□□ 0.83
CCDC57-212ENST00000578910 R3HDM1Q15032 1099 aaKnown RBP20.26■□□□□ 0.83
CCDC57-212ENST00000578910 OVOS2A0A0G2JMS6 1433 aa20.26■□□□□ 0.83
CCDC57-212ENST00000578910 HSPA5P11021 654 aaKnown RBP20.25■□□□□ 0.83
CCDC57-212ENST00000578910 IL2RBP14784 551 aa20.25■□□□□ 0.83
CCDC57-212ENST00000578910 HOXC9P31274 260 aa20.25■□□□□ 0.83
CCDC57-212ENST00000578910 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
CCDC57-212ENST00000578910 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCDC57-212ENST00000578910 RRS1Q15050 365 aaKnown RBP20.24■□□□□ 0.83
CCDC57-212ENST00000578910 SRCAPQ6ZRS2 3230 aa20.24■□□□□ 0.83
CCDC57-212ENST00000578910 LRRC37A3O60309 1634 aa20.24■□□□□ 0.83
CCDC57-212ENST00000578910 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
CCDC57-212ENST00000578910 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
CCDC57-212ENST00000578910 PLSCR1O15162 318 aa20.22■□□□□ 0.83
CCDC57-212ENST00000578910 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
CCDC57-212ENST00000578910 KCNQ2O43526 872 aa20.2■□□□□ 0.82
CCDC57-212ENST00000578910 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
CCDC57-212ENST00000578910 BCL9O00512 1426 aa20.19■□□□□ 0.82
CCDC57-212ENST00000578910 SBF2Q86WG5 1849 aa20.19■□□□□ 0.82
CCDC57-212ENST00000578910 NBPF14Q5TI25 921 aa20.19■□□□□ 0.82
CCDC57-212ENST00000578910 PROM2Q8N271 834 aa20.19■□□□□ 0.82
CCDC57-212ENST00000578910 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
CCDC57-212ENST00000578910 HSP90AB2PQ58FF8 381 aa20.17■□□□□ 0.82
CCDC57-212ENST00000578910 NBPF6Q5VWK0 638 aa20.17■□□□□ 0.82
CCDC57-212ENST00000578910 NBPF4Q96M43 638 aa20.17■□□□□ 0.82
CCDC57-212ENST00000578910 DDX54Q8TDD1 881 aaKnown RBP20.16■□□□□ 0.82
CCDC57-212ENST00000578910 TNS2Q63HR2 1409 aa20.16■□□□□ 0.82
CCDC57-212ENST00000578910 NSD3Q9BZ95 1437 aa20.16■□□□□ 0.82
CCDC57-212ENST00000578910 MYOM1P52179 1685 aa20.14■□□□□ 0.81
CCDC57-212ENST00000578910 EMILIN1Q9Y6C2 1016 aa20.13■□□□□ 0.81
CCDC57-212ENST00000578910 RTL1A6NKG5 1358 aa20.12■□□□□ 0.81
CCDC57-212ENST00000578910 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
CCDC57-212ENST00000578910 TXNRD1Q16881 649 aa20.12■□□□□ 0.81
CCDC57-212ENST00000578910 USHBP1Q8N6Y0 703 aa20.12■□□□□ 0.81
CCDC57-212ENST00000578910 ZCRB1Q8TBF4 217 aaKnown RBP20.12■□□□□ 0.81
CCDC57-212ENST00000578910 PANK3Q9H999 370 aa20.12■□□□□ 0.81
CCDC57-212ENST00000578910 RREB1Q92766 1687 aa20.12■□□□□ 0.81
CCDC57-212ENST00000578910 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
CCDC57-212ENST00000578910 RGPD2P0DJD1 1756 aa20.1■□□□□ 0.81
CCDC57-212ENST00000578910 INSRP06213 1382 aa20.09■□□□□ 0.81
CCDC57-212ENST00000578910 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
CCDC57-212ENST00000578910 NUP188Q5SRE5 1749 aa20.09■□□□□ 0.81
CCDC57-212ENST00000578910 KAT6BQ8WYB5 2073 aa20.09■□□□□ 0.81
CCDC57-212ENST00000578910 FLT4P35916 1363 aa20.08■□□□□ 0.8
CCDC57-212ENST00000578910 ANO8Q9HCE9 1232 aaPredicted RBP20.07■□□□□ 0.8
CCDC57-212ENST00000578910 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
CCDC57-212ENST00000578910 KIF24Q5T7B8 1368 aa20.07■□□□□ 0.8
CCDC57-212ENST00000578910 TNNT2P45379 298 aaPredicted RBP20.06■□□□□ 0.8
CCDC57-212ENST00000578910 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
CCDC57-212ENST00000578910 FAM208AQ9UK61 1670 aaKnown RBP20.06■□□□□ 0.8
CCDC57-212ENST00000578910 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
CCDC57-212ENST00000578910 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms