RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 COL22A1Q8NFW1 1626 aaPredicted RBP17.48■□□□□ 0.39
CTC1-203ENST00000578240 VIRMAQ69YN4 1812 aaKnown RBP17.47■□□□□ 0.39
CTC1-203ENST00000578240 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
CTC1-203ENST00000578240 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
CTC1-203ENST00000578240 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
CTC1-203ENST00000578240 SPATA31A3Q5VYP0 1347 aa17.46■□□□□ 0.39
CTC1-203ENST00000578240 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
CTC1-203ENST00000578240 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
CTC1-203ENST00000578240 ZNF521Q96K83 1311 aa17.45■□□□□ 0.38
CTC1-203ENST00000578240 EIF4A2Q14240 407 aaKnown RBP17.45■□□□□ 0.38
CTC1-203ENST00000578240 ABCC6O95255 1503 aa17.44■□□□□ 0.38
CTC1-203ENST00000578240 U2AF1L5P0DN76 240 aaPredicted RBP17.44■□□□□ 0.38
CTC1-203ENST00000578240 U2AF1Q01081 240 aaKnown RBP eCLIP17.44■□□□□ 0.381e-10■■■■□ 19.8
CTC1-203ENST00000578240 PLEKHF1Q96S99 279 aa17.44■□□□□ 0.38
CTC1-203ENST00000578240 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
CTC1-203ENST00000578240 APAF1O14727 1248 aa17.42■□□□□ 0.38
CTC1-203ENST00000578240 HOXC9P31274 260 aa17.42■□□□□ 0.38
CTC1-203ENST00000578240 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
CTC1-203ENST00000578240 ARHGEF10O15013 1369 aa17.42■□□□□ 0.38
CTC1-203ENST00000578240 NUDCQ9Y266 331 aa17.42■□□□□ 0.38
CTC1-203ENST00000578240 SALL2Q9Y467 1007 aaPredicted RBP17.42■□□□□ 0.38
CTC1-203ENST00000578240 JCADQ9P266 1359 aa17.41■□□□□ 0.38
CTC1-203ENST00000578240 GCP02774 474 aa17.41■□□□□ 0.38
CTC1-203ENST00000578240 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
CTC1-203ENST00000578240 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
CTC1-203ENST00000578240 KCNH5Q8NCM2 988 aa17.39■□□□□ 0.37
CTC1-203ENST00000578240 KDRP35968 1356 aa17.39■□□□□ 0.37
CTC1-203ENST00000578240 ARHGEF25Q86VW2 580 aa17.39■□□□□ 0.37
CTC1-203ENST00000578240 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
CTC1-203ENST00000578240 HMOX1P09601 288 aa17.38■□□□□ 0.37
CTC1-203ENST00000578240 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
CTC1-203ENST00000578240 IGSF1Q8N6C5 1336 aa17.37■□□□□ 0.37
CTC1-203ENST00000578240 AMPHP49418 695 aa17.37■□□□□ 0.37
CTC1-203ENST00000578240 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
CTC1-203ENST00000578240 FCHSD2O94868 740 aa17.36■□□□□ 0.37
CTC1-203ENST00000578240 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
CTC1-203ENST00000578240 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
CTC1-203ENST00000578240 CDCA7LQ96GN5 454 aa17.36■□□□□ 0.37
CTC1-203ENST00000578240 LRRC37A3O60309 1634 aa17.36■□□□□ 0.37
CTC1-203ENST00000578240 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
CTC1-203ENST00000578240 IP6K1Q92551 441 aa17.36■□□□□ 0.37
CTC1-203ENST00000578240 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
CTC1-203ENST00000578240 CPDO75976 1380 aa17.34■□□□□ 0.37
CTC1-203ENST00000578240 PLCH1Q4KWH8 1693 aa17.34■□□□□ 0.37
CTC1-203ENST00000578240 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.37
CTC1-203ENST00000578240 EYA1Q99502 592 aa17.33■□□□□ 0.37
CTC1-203ENST00000578240 SPATA31A6Q5VVP1 1343 aa17.33■□□□□ 0.36
CTC1-203ENST00000578240 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
CTC1-203ENST00000578240 WNK3Q9BYP7 1800 aa17.32■□□□□ 0.36
CTC1-203ENST00000578240 PDE3BQ13370 1112 aa17.32■□□□□ 0.36
CTC1-203ENST00000578240 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
CTC1-203ENST00000578240 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
CTC1-203ENST00000578240 AXIN2Q9Y2T1 843 aa17.32■□□□□ 0.36
CTC1-203ENST00000578240 PKD1L3Q7Z443 1732 aa17.31■□□□□ 0.36
CTC1-203ENST00000578240 COL14A1Q05707 1796 aaKnown RBP17.31■□□□□ 0.36
CTC1-203ENST00000578240 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
CTC1-203ENST00000578240 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
CTC1-203ENST00000578240 SULT6B1Q6IMI4 303 aa17.31■□□□□ 0.36
CTC1-203ENST00000578240 NRAPQ86VF7 1730 aa17.31■□□□□ 0.36
CTC1-203ENST00000578240 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
CTC1-203ENST00000578240 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
CTC1-203ENST00000578240 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
CTC1-203ENST00000578240 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
CTC1-203ENST00000578240 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
CTC1-203ENST00000578240 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
CTC1-203ENST00000578240 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
CTC1-203ENST00000578240 ZBTB7CA1YPR0 619 aa17.29■□□□□ 0.36
CTC1-203ENST00000578240 LRRC59Q96AG4 307 aaKnown RBP17.29■□□□□ 0.36
CTC1-203ENST00000578240 ERBB3P21860 1342 aa17.29■□□□□ 0.36
CTC1-203ENST00000578240 PARP4Q9UKK3 1724 aaKnown RBP17.28■□□□□ 0.36
CTC1-203ENST00000578240 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
CTC1-203ENST00000578240 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
CTC1-203ENST00000578240 RGS17Q9UGC6 210 aaPredicted RBP17.28■□□□□ 0.36
CTC1-203ENST00000578240 ADAMTS7Q9UKP4 1686 aa17.27■□□□□ 0.36
CTC1-203ENST00000578240 LRP6O75581 1613 aa17.27■□□□□ 0.36
CTC1-203ENST00000578240 DUSP27Q5VZP5 1158 aa17.27■□□□□ 0.36
CTC1-203ENST00000578240 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.36
CTC1-203ENST00000578240 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
CTC1-203ENST00000578240 COL5A2P05997 1499 aaPredicted RBP17.27■□□□□ 0.35
CTC1-203ENST00000578240 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
CTC1-203ENST00000578240 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
CTC1-203ENST00000578240 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
CTC1-203ENST00000578240 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
CTC1-203ENST00000578240 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
CTC1-203ENST00000578240 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
CTC1-203ENST00000578240 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
CTC1-203ENST00000578240 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
CTC1-203ENST00000578240 ANKRD24Q8TF21 1146 aa17.25■□□□□ 0.35
CTC1-203ENST00000578240 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
CTC1-203ENST00000578240 NUTM2BA6NNL0 878 aaPredicted RBP17.24■□□□□ 0.35
CTC1-203ENST00000578240 NUTM2EB1AL46 878 aaPredicted RBP17.24■□□□□ 0.35
CTC1-203ENST00000578240 NUTM2AQ8IVF1 878 aaPredicted RBP17.24■□□□□ 0.35
CTC1-203ENST00000578240 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
CTC1-203ENST00000578240 RIPK4P57078 832 aa17.23■□□□□ 0.35
CTC1-203ENST00000578240 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
CTC1-203ENST00000578240 MEGF6O75095 1541 aa17.22■□□□□ 0.35
CTC1-203ENST00000578240 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
CTC1-203ENST00000578240 KDM3BQ7LBC6 1761 aa17.22■□□□□ 0.35
CTC1-203ENST00000578240 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
CTC1-203ENST00000578240 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms