RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 RGPD1P0DJD0 1748 aa16.74■□□□□ 0.27
LITAF-219ENST00000576334 EDC4Q6P2E9 1401 aaKnown RBP16.74■□□□□ 0.27
LITAF-219ENST00000576334 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
LITAF-219ENST00000576334 USP54Q70EL1 1684 aa16.73■□□□□ 0.27
LITAF-219ENST00000576334 FBLN1P23142 703 aa16.73■□□□□ 0.27
LITAF-219ENST00000576334 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
LITAF-219ENST00000576334 LTN1O94822 1766 aa16.73■□□□□ 0.27
LITAF-219ENST00000576334 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
LITAF-219ENST00000576334 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
LITAF-219ENST00000576334 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
LITAF-219ENST00000576334 PUS7Q96PZ0 661 aaKnown RBP16.72■□□□□ 0.27
LITAF-219ENST00000576334 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
LITAF-219ENST00000576334 LRRC37A3O60309 1634 aa16.71■□□□□ 0.27
LITAF-219ENST00000576334 WNK3Q9BYP7 1800 aa16.71■□□□□ 0.27
LITAF-219ENST00000576334 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
LITAF-219ENST00000576334 BAG6P46379 1132 aa16.71■□□□□ 0.27
LITAF-219ENST00000576334 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
LITAF-219ENST00000576334 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
LITAF-219ENST00000576334 EZH2Q15910 746 aaKnown RBP16.7■□□□□ 0.26
LITAF-219ENST00000576334 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
LITAF-219ENST00000576334 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
LITAF-219ENST00000576334 TMF1P82094 1093 aa16.69■□□□□ 0.26
LITAF-219ENST00000576334 CCER1Q8TC90 406 aaPredicted RBP16.69■□□□□ 0.26
LITAF-219ENST00000576334 PTF1AQ7RTS3 328 aa16.68■□□□□ 0.26
LITAF-219ENST00000576334 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
LITAF-219ENST00000576334 APBA3O96018 575 aa16.67■□□□□ 0.26
LITAF-219ENST00000576334 CARD10Q9BWT7 1032 aa16.67■□□□□ 0.26
LITAF-219ENST00000576334 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
LITAF-219ENST00000576334 ANKRD36BQ8N2N9 1353 aa16.66■□□□□ 0.26
LITAF-219ENST00000576334 DDB1Q16531 1140 aa16.66■□□□□ 0.26
LITAF-219ENST00000576334 CAMKK2Q96RR4 588 aa16.66■□□□□ 0.26
LITAF-219ENST00000576334 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
LITAF-219ENST00000576334 NINLQ9Y2I6 1382 aa16.65■□□□□ 0.26
LITAF-219ENST00000576334 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
LITAF-219ENST00000576334 MARCH10Q8NA82 808 aaPredicted RBP16.65■□□□□ 0.26
LITAF-219ENST00000576334 ANKRD24Q8TF21 1146 aa16.65■□□□□ 0.26
LITAF-219ENST00000576334 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
LITAF-219ENST00000576334 MYOM1P52179 1685 aa16.65■□□□□ 0.26
LITAF-219ENST00000576334 ERBB3P21860 1342 aa16.65■□□□□ 0.26
LITAF-219ENST00000576334 SBF2Q86WG5 1849 aa16.64■□□□□ 0.25
LITAF-219ENST00000576334 LTV1Q96GA3 475 aaPredicted RBP16.64■□□□□ 0.25
LITAF-219ENST00000576334 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
LITAF-219ENST00000576334 FYB1O15117 783 aa16.63■□□□□ 0.25
LITAF-219ENST00000576334 COG3Q96JB2 828 aa16.63■□□□□ 0.25
LITAF-219ENST00000576334 ABCC6O95255 1503 aa16.63■□□□□ 0.25
LITAF-219ENST00000576334 R3HDM1Q15032 1099 aaKnown RBP16.62■□□□□ 0.25
LITAF-219ENST00000576334 CARD14Q9BXL6 1004 aa16.62■□□□□ 0.25
LITAF-219ENST00000576334 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
LITAF-219ENST00000576334 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
LITAF-219ENST00000576334 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
LITAF-219ENST00000576334 RRS1Q15050 365 aaKnown RBP16.61■□□□□ 0.25
LITAF-219ENST00000576334 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
LITAF-219ENST00000576334 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
LITAF-219ENST00000576334 IP6K1Q92551 441 aa16.6■□□□□ 0.25
LITAF-219ENST00000576334 CCDC7Q96M83 1385 aa16.6■□□□□ 0.25
LITAF-219ENST00000576334 RREB1Q92766 1687 aa16.59■□□□□ 0.25
LITAF-219ENST00000576334 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
LITAF-219ENST00000576334 KIF20BQ96Q89 1820 aa16.59■□□□□ 0.25
LITAF-219ENST00000576334 EXOC5O00471 708 aa16.59■□□□□ 0.25
LITAF-219ENST00000576334 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
LITAF-219ENST00000576334 HOXC9P31274 260 aa16.59■□□□□ 0.25
LITAF-219ENST00000576334 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.24
LITAF-219ENST00000576334 TNS2Q63HR2 1409 aa16.57■□□□□ 0.24
LITAF-219ENST00000576334 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
LITAF-219ENST00000576334 KCNQ2O43526 872 aa16.57■□□□□ 0.24
LITAF-219ENST00000576334 IL2RBP14784 551 aa16.56■□□□□ 0.24
LITAF-219ENST00000576334 AMPHP49418 695 aa16.56■□□□□ 0.24
LITAF-219ENST00000576334 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
LITAF-219ENST00000576334 ACSBG1Q96GR2 724 aa16.55■□□□□ 0.24
LITAF-219ENST00000576334 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
LITAF-219ENST00000576334 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
LITAF-219ENST00000576334 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
LITAF-219ENST00000576334 C11orf95C9JLR9 678 aaPredicted RBP16.53■□□□□ 0.24
LITAF-219ENST00000576334 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
LITAF-219ENST00000576334 PROM2Q8N271 834 aa16.53■□□□□ 0.24
LITAF-219ENST00000576334 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.24
LITAF-219ENST00000576334 HSP90AB2PQ58FF8 381 aa16.52■□□□□ 0.24
LITAF-219ENST00000576334 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
LITAF-219ENST00000576334 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
LITAF-219ENST00000576334 BCL9O00512 1426 aa16.52■□□□□ 0.23
LITAF-219ENST00000576334 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
LITAF-219ENST00000576334 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
LITAF-219ENST00000576334 LRP5O75197 1615 aa16.5■□□□□ 0.23
LITAF-219ENST00000576334 PLSCR1O15162 318 aa16.5■□□□□ 0.23
LITAF-219ENST00000576334 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
LITAF-219ENST00000576334 ANO8Q9HCE9 1232 aaPredicted RBP16.5■□□□□ 0.23
LITAF-219ENST00000576334 MEGF6O75095 1541 aa16.5■□□□□ 0.23
LITAF-219ENST00000576334 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
LITAF-219ENST00000576334 NHSQ6T4R5 1651 aa16.49■□□□□ 0.23
LITAF-219ENST00000576334 RGPD3A6NKT7 1758 aaPredicted RBP16.48■□□□□ 0.23
LITAF-219ENST00000576334 RGPD4Q7Z3J3 1758 aa16.48■□□□□ 0.23
LITAF-219ENST00000576334 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
LITAF-219ENST00000576334 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
LITAF-219ENST00000576334 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
LITAF-219ENST00000576334 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
LITAF-219ENST00000576334 PANK3Q9H999 370 aa16.47■□□□□ 0.23
LITAF-219ENST00000576334 BTAF1O14981 1849 aa16.47■□□□□ 0.23
LITAF-219ENST00000576334 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
LITAF-219ENST00000576334 NBPF14Q5TI25 921 aa16.46■□□□□ 0.23
LITAF-219ENST00000576334 MAP2P11137 1827 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms