RNA–Protein interactions for RNA: ENST00000574941.5

TRAP1-211, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-211ENST00000574941 CGNL1Q0VF96 1302 aa27.06■■□□□ 1.92
TRAP1-211ENST00000574941 CCDC7Q96M83 1385 aa27.06■■□□□ 1.92
TRAP1-211ENST00000574941 KIF20BQ96Q89 1820 aa27.05■■□□□ 1.92
TRAP1-211ENST00000574941 WASHC2AQ641Q2 1341 aa27.05■■□□□ 1.92
TRAP1-211ENST00000574941 COL18A1P39060 1754 aa27.04■■□□□ 1.92
TRAP1-211ENST00000574941 FBLN1P23142 703 aa27.03■■□□□ 1.92
TRAP1-211ENST00000574941 FAM98CQ17RN3 349 aaKnown RBP27.03■■□□□ 1.92
TRAP1-211ENST00000574941 SPATA31A1Q5TZJ5 1347 aa27.03■■□□□ 1.92
TRAP1-211ENST00000574941 USP35Q9P2H5 1018 aa27.03■■□□□ 1.92
TRAP1-211ENST00000574941 A0A0G2JS52 829 aa27.02■■□□□ 1.92
TRAP1-211ENST00000574941 MYT1Q01538 1121 aa27.02■■□□□ 1.92
TRAP1-211ENST00000574941 SEPT12Q8IYM1 358 aa27.01■■□□□ 1.91
TRAP1-211ENST00000574941 ABCC6O95255 1503 aa27■■□□□ 1.91
TRAP1-211ENST00000574941 MAP3K19Q56UN5 1328 aa26.99■■□□□ 1.91
TRAP1-211ENST00000574941 CSB-PGBD3P0DP91 1061 aa26.99■■□□□ 1.91
TRAP1-211ENST00000574941 ZEB1P37275 1124 aaPredicted RBP26.99■■□□□ 1.91
TRAP1-211ENST00000574941 LTN1O94822 1766 aa26.99■■□□□ 1.91
TRAP1-211ENST00000574941 TOM1L2Q6ZVM7 507 aa26.98■■□□□ 1.91
TRAP1-211ENST00000574941 CRB1P82279 1406 aa26.98■■□□□ 1.91
TRAP1-211ENST00000574941 WDR17Q8IZU2 1322 aa26.97■■□□□ 1.91
TRAP1-211ENST00000574941 ONECUT3O60422 494 aaPredicted RBP26.97■■□□□ 1.91
TRAP1-211ENST00000574941 RRS1Q15050 365 aaKnown RBP26.97■■□□□ 1.91
TRAP1-211ENST00000574941 KNSTRNQ9Y448 316 aa26.97■■□□□ 1.91
TRAP1-211ENST00000574941 AMPHP49418 695 aa26.96■■□□□ 1.91
TRAP1-211ENST00000574941 TCP11L2Q8N4U5 519 aa26.95■■□□□ 1.9
TRAP1-211ENST00000574941 IP6K1Q92551 441 aa26.95■■□□□ 1.9
TRAP1-211ENST00000574941 RGPD5Q99666 1765 aa26.94■■□□□ 1.9
TRAP1-211ENST00000574941 BLMP54132 1417 aaPredicted RBP26.92■■□□□ 1.9
TRAP1-211ENST00000574941 HOXC9P31274 260 aa26.92■■□□□ 1.9
TRAP1-211ENST00000574941 ANKRD24Q8TF21 1146 aa26.92■■□□□ 1.9
TRAP1-211ENST00000574941 ERBB3P21860 1342 aa26.91■■□□□ 1.9
TRAP1-211ENST00000574941 TNNT2P45379 298 aaPredicted RBP26.91■■□□□ 1.9
TRAP1-211ENST00000574941 BARGINQ6ZT62 677 aa26.91■■□□□ 1.9
TRAP1-211ENST00000574941 LTV1Q96GA3 475 aaPredicted RBP26.91■■□□□ 1.9
TRAP1-211ENST00000574941 NSD2O96028 1365 aa26.91■■□□□ 1.9
TRAP1-211ENST00000574941 RTL1A6NKG5 1358 aa26.9■■□□□ 1.9
TRAP1-211ENST00000574941 THRAP3Q9Y2W1 955 aaKnown RBP26.9■■□□□ 1.9
TRAP1-211ENST00000574941 THSD7AQ9UPZ6 1657 aa26.89■■□□□ 1.9
TRAP1-211ENST00000574941 NLRP2Q9NX02 1062 aa26.89■■□□□ 1.9
TRAP1-211ENST00000574941 KRT27Q7Z3Y8 459 aa26.88■■□□□ 1.89
TRAP1-211ENST00000574941 CARD10Q9BWT7 1032 aa26.88■■□□□ 1.89
TRAP1-211ENST00000574941 EMILIN1Q9Y6C2 1016 aa26.88■■□□□ 1.89
TRAP1-211ENST00000574941 AMER1Q5JTC6 1135 aaPredicted RBP26.87■■□□□ 1.89
TRAP1-211ENST00000574941 MORC1Q86VD1 984 aa26.87■■□□□ 1.89
TRAP1-211ENST00000574941 ANKRD26Q9UPS8 1709 aa26.87■■□□□ 1.89
TRAP1-211ENST00000574941 PPM1GO15355 546 aaPredicted RBP26.86■■□□□ 1.89
TRAP1-211ENST00000574941 PER1O15534 1290 aaPredicted RBP26.86■■□□□ 1.89
TRAP1-211ENST00000574941 BRWD3Q6RI45 1802 aa26.86■■□□□ 1.89
TRAP1-211ENST00000574941 FLT4P35916 1363 aa26.84■■□□□ 1.89
TRAP1-211ENST00000574941 PEAK1Q9H792 1746 aa26.83■■□□□ 1.89
TRAP1-211ENST00000574941 HSP90AB2PQ58FF8 381 aa26.83■■□□□ 1.89
TRAP1-211ENST00000574941 UPF1Q92900 1129 aaKnown RBP eCLIP26.83■■□□□ 1.89
TRAP1-211ENST00000574941 KIF24Q5T7B8 1368 aa26.83■■□□□ 1.88
TRAP1-211ENST00000574941 POLKQ9UBT6 870 aa26.82■■□□□ 1.88
TRAP1-211ENST00000574941 CC2D1BQ5T0F9 858 aaKnown RBP26.81■■□□□ 1.88
TRAP1-211ENST00000574941 INSRP06213 1382 aa26.81■■□□□ 1.88
TRAP1-211ENST00000574941 CNGB1Q14028 1251 aaPredicted RBP26.8■■□□□ 1.88
TRAP1-211ENST00000574941 SMG6Q86US8 1419 aaKnown RBP26.8■■□□□ 1.88
TRAP1-211ENST00000574941 PDE3BQ13370 1112 aa26.79■■□□□ 1.88
TRAP1-211ENST00000574941 FAM182BQ5T319 152 aa26.79■■□□□ 1.88
TRAP1-211ENST00000574941 CDCA7Q9BWT1 371 aaPredicted RBP26.78■■□□□ 1.88
TRAP1-211ENST00000574941 DISP2A7MBM2 1401 aa26.77■■□□□ 1.88
TRAP1-211ENST00000574941 DDB1Q16531 1140 aa26.75■■□□□ 1.87
TRAP1-211ENST00000574941 PARP4Q9UKK3 1724 aaKnown RBP26.75■■□□□ 1.87
TRAP1-211ENST00000574941 FAM208AQ9UK61 1670 aaKnown RBP26.75■■□□□ 1.87
TRAP1-211ENST00000574941 WNK3Q9BYP7 1800 aa26.74■■□□□ 1.87
TRAP1-211ENST00000574941 NPC1L1Q9UHC9 1359 aa26.73■■□□□ 1.87
TRAP1-211ENST00000574941 LRRC37A3O60309 1634 aa26.73■■□□□ 1.87
TRAP1-211ENST00000574941 IL2RBP14784 551 aa26.73■■□□□ 1.87
TRAP1-211ENST00000574941 NBPF6Q5VWK0 638 aa26.73■■□□□ 1.87
TRAP1-211ENST00000574941 NBPF4Q96M43 638 aa26.73■■□□□ 1.87
TRAP1-211ENST00000574941 MAP2P11137 1827 aaKnown RBP26.73■■□□□ 1.87
TRAP1-211ENST00000574941 USHBP1Q8N6Y0 703 aa26.72■■□□□ 1.87
TRAP1-211ENST00000574941 EXOC5O00471 708 aa26.69■■□□□ 1.86
TRAP1-211ENST00000574941 FAM196AQ6ZSG2 479 aa26.68■■□□□ 1.86
TRAP1-211ENST00000574941 RGPD2P0DJD1 1756 aa26.68■■□□□ 1.86
TRAP1-211ENST00000574941 EP400Q96L91 3159 aa26.67■■□□□ 1.86
TRAP1-211ENST00000574941 TNS2Q63HR2 1409 aa26.67■■□□□ 1.86
TRAP1-211ENST00000574941 EIF4A2Q14240 407 aaKnown RBP26.66■■□□□ 1.86
TRAP1-211ENST00000574941 CCDC125Q86Z20 511 aa26.65■■□□□ 1.86
TRAP1-211ENST00000574941 MARCH10Q8NA82 808 aaPredicted RBP26.65■■□□□ 1.86
TRAP1-211ENST00000574941 DDX10Q13206 875 aaKnown RBP26.64■■□□□ 1.86
TRAP1-211ENST00000574941 MEGF6O75095 1541 aa26.64■■□□□ 1.85
TRAP1-211ENST00000574941 OVOS2A0A0G2JMS6 1433 aa26.64■■□□□ 1.85
TRAP1-211ENST00000574941 MTHFSP49914 203 aa26.63■■□□□ 1.85
TRAP1-211ENST00000574941 SF3B2Q13435 895 aaKnown RBP26.63■■□□□ 1.85
TRAP1-211ENST00000574941 RAPGEF4Q8WZA2 1011 aa26.63■■□□□ 1.85
TRAP1-211ENST00000574941 EYA1Q99502 592 aa26.63■■□□□ 1.85
TRAP1-211ENST00000574941 TRIM37O94972 964 aa26.61■■□□□ 1.85
TRAP1-211ENST00000574941 TATP17735 454 aaPredicted RBP26.59■■□□□ 1.85
TRAP1-211ENST00000574941 DDX54Q8TDD1 881 aaKnown RBP26.58■■□□□ 1.85
TRAP1-211ENST00000574941 NCAPD2Q15021 1401 aa26.57■■□□□ 1.84
TRAP1-211ENST00000574941 DEFB132Q7Z7B7 95 aa26.56■■□□□ 1.84
TRAP1-211ENST00000574941 ZCRB1Q8TBF4 217 aaKnown RBP26.56■■□□□ 1.84
TRAP1-211ENST00000574941 IGSF1Q8N6C5 1336 aa26.55■■□□□ 1.84
TRAP1-211ENST00000574941 IL13P35225 146 aa26.54■■□□□ 1.84
TRAP1-211ENST00000574941 RGPD1P0DJD0 1748 aa26.53■■□□□ 1.84
TRAP1-211ENST00000574941 BAG6P46379 1132 aa26.53■■□□□ 1.84
TRAP1-211ENST00000574941 BCL9O00512 1426 aa26.52■■□□□ 1.84
TRAP1-211ENST00000574941 PPP2R1AP30153 589 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms