RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PAK3O75914 559 aaPredicted RBP30.41■■■□□ 2.46
NPLOC4-217ENST00000574897 ZKSCAN2Q63HK3 967 aa30.41■■■□□ 2.46
NPLOC4-217ENST00000574897 KCNA6P17658 529 aa30.41■■■□□ 2.46
NPLOC4-217ENST00000574897 PCDHB15Q9Y5E8 787 aa30.41■■■□□ 2.46
NPLOC4-217ENST00000574897 SSH2Q76I76 1423 aa30.4■■■□□ 2.46
NPLOC4-217ENST00000574897 IPO9Q96P70 1041 aaKnown RBP30.39■■■□□ 2.45
NPLOC4-217ENST00000574897 EIF4A2Q14240 407 aaKnown RBP30.38■■■□□ 2.45
NPLOC4-217ENST00000574897 AEBP1Q8IUX7 1158 aa30.38■■■□□ 2.45
NPLOC4-217ENST00000574897 TRIM27P14373 513 aa30.36■■■□□ 2.45
NPLOC4-217ENST00000574897 DZIP1LQ8IYY4 767 aaKnown RBP30.36■■■□□ 2.45
NPLOC4-217ENST00000574897 NOP58Q9Y2X3 529 aaKnown RBP30.36■■■□□ 2.45
NPLOC4-217ENST00000574897 MVPQ14764 893 aaKnown RBP30.36■■■□□ 2.45
NPLOC4-217ENST00000574897 FTSJ3Q8IY81 847 aaKnown RBP30.35■■■□□ 2.45
NPLOC4-217ENST00000574897 FAM83GA6ND36 823 aa30.35■■■□□ 2.45
NPLOC4-217ENST00000574897 HSP90AB2PQ58FF8 381 aa30.35■■■□□ 2.45
NPLOC4-217ENST00000574897 NOB1Q9ULX3 412 aaKnown RBP30.35■■■□□ 2.45
NPLOC4-217ENST00000574897 NGDNQ8NEJ9 315 aaKnown RBP30.34■■■□□ 2.45
NPLOC4-217ENST00000574897 USP31Q70CQ4 1352 aa30.32■■■□□ 2.44
NPLOC4-217ENST00000574897 DCTN1Q14203 1278 aa30.32■■■□□ 2.44
NPLOC4-217ENST00000574897 SULT6B1Q6IMI4 303 aa30.32■■■□□ 2.44
NPLOC4-217ENST00000574897 PIK3C2AO00443 1686 aa30.31■■■□□ 2.44
NPLOC4-217ENST00000574897 FMN2Q9NZ56 1722 aa30.31■■■□□ 2.44
NPLOC4-217ENST00000574897 C8orf34Q49A92 452 aa30.3■■■□□ 2.44
NPLOC4-217ENST00000574897 ATF7IPQ6VMQ6 1270 aa30.3■■■□□ 2.44
NPLOC4-217ENST00000574897 TSPYL6Q8N831 410 aa30.29■■■□□ 2.44
NPLOC4-217ENST00000574897 RBM33Q96EV2 1170 aaKnown RBP30.29■■■□□ 2.44
NPLOC4-217ENST00000574897 RGPD1P0DJD0 1748 aa30.29■■■□□ 2.44
NPLOC4-217ENST00000574897 CHD2O14647 1828 aaKnown RBP30.28■■■□□ 2.44
NPLOC4-217ENST00000574897 MBIPQ9NS73 344 aa30.28■■■□□ 2.44
NPLOC4-217ENST00000574897 ELL2O00472 640 aaPredicted RBP30.27■■■□□ 2.44
NPLOC4-217ENST00000574897 FAM161AQ3B820 660 aa30.27■■■□□ 2.44
NPLOC4-217ENST00000574897 MAP3K19Q56UN5 1328 aa30.27■■■□□ 2.44
NPLOC4-217ENST00000574897 TTC21AQ8NDW8 1320 aa30.27■■■□□ 2.44
NPLOC4-217ENST00000574897 ZNF853P0CG23 659 aa30.26■■■□□ 2.43
NPLOC4-217ENST00000574897 ITPRIPQ8IWB1 547 aa30.26■■■□□ 2.43
NPLOC4-217ENST00000574897 ZNF142P52746 1687 aaPredicted RBP30.25■■■□□ 2.43
NPLOC4-217ENST00000574897 AAMPQ13685 434 aa30.25■■■□□ 2.43
NPLOC4-217ENST00000574897 IFT57Q9NWB7 429 aa30.25■■■□□ 2.43
NPLOC4-217ENST00000574897 TMEM57Q8N5G2 664 aa30.25■■■□□ 2.43
NPLOC4-217ENST00000574897 GNAI1P63096 354 aa30.24■■■□□ 2.43
NPLOC4-217ENST00000574897 ADAMTSL3P82987 1691 aa30.24■■■□□ 2.43
NPLOC4-217ENST00000574897 VAMP4O75379 141 aa30.23■■■□□ 2.43
NPLOC4-217ENST00000574897 VIRMAQ69YN4 1812 aaKnown RBP30.23■■■□□ 2.43
NPLOC4-217ENST00000574897 NUTM2GQ5VZR2 741 aa30.23■■■□□ 2.43
NPLOC4-217ENST00000574897 ZBTB47Q9UFB7 747 aaPredicted RBP30.23■■■□□ 2.43
NPLOC4-217ENST00000574897 MARF1Q9Y4F3 1742 aaKnown RBP30.23■■■□□ 2.43
NPLOC4-217ENST00000574897 CALD1Q05682 793 aaKnown RBP30.22■■■□□ 2.43
NPLOC4-217ENST00000574897 ALDH1L2Q3SY69 923 aa30.22■■■□□ 2.43
NPLOC4-217ENST00000574897 PIK3R4Q99570 1358 aa30.22■■■□□ 2.43
NPLOC4-217ENST00000574897 KIF16BQ96L93 1317 aa30.22■■■□□ 2.43
NPLOC4-217ENST00000574897 ANKLE2Q86XL3 938 aa30.21■■■□□ 2.43
NPLOC4-217ENST00000574897 ANKARQ7Z5J8 1434 aa30.2■■■□□ 2.42
NPLOC4-217ENST00000574897 LMOD3Q0VAK6 560 aa30.2■■■□□ 2.42
NPLOC4-217ENST00000574897 CFAP44Q96MT7 982 aa30.19■■■□□ 2.42
NPLOC4-217ENST00000574897 C8orf58Q8NAV2 365 aa30.19■■■□□ 2.42
NPLOC4-217ENST00000574897 PDZRN3Q9UPQ7 1066 aa30.18■■■□□ 2.42
NPLOC4-217ENST00000574897 SETD1BQ9UPS6 1966 aaKnown RBP30.18■■■□□ 2.42
NPLOC4-217ENST00000574897 NLRP6P59044 892 aa30.18■■■□□ 2.42
NPLOC4-217ENST00000574897 DDX19BQ9UMR2 479 aa30.18■■■□□ 2.42
NPLOC4-217ENST00000574897 RWDD1Q9H446 243 aaPredicted RBP30.17■■■□□ 2.42
NPLOC4-217ENST00000574897 IPO8O15397 1037 aaKnown RBP30.16■■■□□ 2.42
NPLOC4-217ENST00000574897 MCM10Q7L590 875 aa30.16■■■□□ 2.42
NPLOC4-217ENST00000574897 MRPL50Q8N5N7 158 aaKnown RBP30.16■■■□□ 2.42
NPLOC4-217ENST00000574897 SBNO1A3KN83 1393 aa30.15■■■□□ 2.42
NPLOC4-217ENST00000574897 TWISTNBQ3B726 338 aaPredicted RBP30.15■■■□□ 2.42
NPLOC4-217ENST00000574897 FLT4P35916 1363 aa30.15■■■□□ 2.42
NPLOC4-217ENST00000574897 MYT1Q01538 1121 aa30.14■■■□□ 2.42
NPLOC4-217ENST00000574897 AMPHP49418 695 aa30.13■■■□□ 2.41
NPLOC4-217ENST00000574897 ZNF428Q96B54 188 aa30.12■■■□□ 2.41
NPLOC4-217ENST00000574897 FOXO3O43524 673 aa30.11■■■□□ 2.41
NPLOC4-217ENST00000574897 KRT24Q2M2I5 525 aa30.11■■■□□ 2.41
NPLOC4-217ENST00000574897 BRPF1P55201 1214 aaPredicted RBP30.11■■■□□ 2.41
NPLOC4-217ENST00000574897 ZBTB40Q9NUA8 1239 aa30.11■■■□□ 2.41
NPLOC4-217ENST00000574897 ARHGEF10O15013 1369 aa30.1■■■□□ 2.41
NPLOC4-217ENST00000574897 ABTB2Q8N961 1025 aa30.1■■■□□ 2.41
NPLOC4-217ENST00000574897 EYA1Q99502 592 aa30.09■■■□□ 2.41
NPLOC4-217ENST00000574897 C14orf37Q86TY3 774 aa30.08■■■□□ 2.41
NPLOC4-217ENST00000574897 PHF8Q9UPP1 1060 aa30.07■■■□□ 2.4
NPLOC4-217ENST00000574897 USP54Q70EL1 1684 aa30.06■■■□□ 2.4
NPLOC4-217ENST00000574897 MTHFSDQ2M296 383 aaKnown RBP30.06■■■□□ 2.4
NPLOC4-217ENST00000574897 SEC24BO95487 1268 aa30.05■■■□□ 2.4
NPLOC4-217ENST00000574897 HDAC1Q13547 482 aaPredicted RBP30.04■■■□□ 2.4
NPLOC4-217ENST00000574897 IGSF1Q8N6C5 1336 aa30.04■■■□□ 2.4
NPLOC4-217ENST00000574897 LTN1O94822 1766 aa30.04■■■□□ 2.4
NPLOC4-217ENST00000574897 KDRP35968 1356 aa30.03■■■□□ 2.4
NPLOC4-217ENST00000574897 HOXC9P31274 260 aa30.03■■■□□ 2.4
NPLOC4-217ENST00000574897 CHL1O00533 1208 aa30.03■■■□□ 2.4
NPLOC4-217ENST00000574897 MIS18AQ9NYP9 233 aa30.02■■■□□ 2.4
NPLOC4-217ENST00000574897 NPHP4O75161 1426 aaPredicted RBP30.01■■■□□ 2.39
NPLOC4-217ENST00000574897 CRB1P82279 1406 aa30.01■■■□□ 2.39
NPLOC4-217ENST00000574897 NBR1Q14596 966 aa30.01■■■□□ 2.39
NPLOC4-217ENST00000574897 ARHGAP45Q92619 1136 aa30.01■■■□□ 2.39
NPLOC4-217ENST00000574897 LTV1Q96GA3 475 aaPredicted RBP30.01■■■□□ 2.39
NPLOC4-217ENST00000574897 ADGRL3Q9HAR2 1447 aa30.01■■■□□ 2.39
NPLOC4-217ENST00000574897 C1orf115Q9H7X2 142 aa30■■■□□ 2.39
NPLOC4-217ENST00000574897 ZBTB7BO15156 539 aaPredicted RBP29.99■■■□□ 2.39
NPLOC4-217ENST00000574897 ESCO1Q5FWF5 840 aa29.99■■■□□ 2.39
NPLOC4-217ENST00000574897 SLC4A3P48751 1232 aa29.98■■■□□ 2.39
NPLOC4-217ENST00000574897 ABCC4O15439 1325 aa29.98■■■□□ 2.39
NPLOC4-217ENST00000574897 NWD1Q149M9 1564 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms