RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 EDC4Q6P2E9 1401 aaKnown RBP17.81■□□□□ 0.44
NPLOC4-213ENST00000573519 CSB-PGBD3P0DP91 1061 aa17.81■□□□□ 0.44
NPLOC4-213ENST00000573519 BAG6P46379 1132 aa17.81■□□□□ 0.44
NPLOC4-213ENST00000573519 TMF1P82094 1093 aa17.81■□□□□ 0.44
NPLOC4-213ENST00000573519 THRAP3Q9Y2W1 955 aaKnown RBP17.81■□□□□ 0.44
NPLOC4-213ENST00000573519 NFAT5O94916 1531 aa17.8■□□□□ 0.44
NPLOC4-213ENST00000573519 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
NPLOC4-213ENST00000573519 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
NPLOC4-213ENST00000573519 COL18A1P39060 1754 aa17.79■□□□□ 0.44
NPLOC4-213ENST00000573519 WDR17Q8IZU2 1322 aa17.78■□□□□ 0.44
NPLOC4-213ENST00000573519 FAM196AQ6ZSG2 479 aa17.78■□□□□ 0.44
NPLOC4-213ENST00000573519 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
NPLOC4-213ENST00000573519 TRIM37O94972 964 aa17.76■□□□□ 0.43
NPLOC4-213ENST00000573519 USP54Q70EL1 1684 aa17.76■□□□□ 0.43
NPLOC4-213ENST00000573519 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
NPLOC4-213ENST00000573519 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
NPLOC4-213ENST00000573519 DDB1Q16531 1140 aa17.74■□□□□ 0.43
NPLOC4-213ENST00000573519 CDCA8Q53HL2 280 aa17.74■□□□□ 0.43
NPLOC4-213ENST00000573519 PARP4Q9UKK3 1724 aaKnown RBP17.74■□□□□ 0.43
NPLOC4-213ENST00000573519 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
NPLOC4-213ENST00000573519 COG3Q96JB2 828 aa17.73■□□□□ 0.43
NPLOC4-213ENST00000573519 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
NPLOC4-213ENST00000573519 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
NPLOC4-213ENST00000573519 ABCC6O95255 1503 aa17.72■□□□□ 0.43
NPLOC4-213ENST00000573519 TNS1Q9HBL0 1735 aaKnown RBP17.72■□□□□ 0.43
NPLOC4-213ENST00000573519 LTN1O94822 1766 aa17.72■□□□□ 0.43
NPLOC4-213ENST00000573519 CARD10Q9BWT7 1032 aa17.72■□□□□ 0.43
NPLOC4-213ENST00000573519 LRRC37A3O60309 1634 aa17.72■□□□□ 0.43
NPLOC4-213ENST00000573519 APBA3O96018 575 aa17.71■□□□□ 0.43
NPLOC4-213ENST00000573519 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
NPLOC4-213ENST00000573519 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
NPLOC4-213ENST00000573519 NLRP2Q9NX02 1062 aa17.7■□□□□ 0.42
NPLOC4-213ENST00000573519 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
NPLOC4-213ENST00000573519 CCDC7Q96M83 1385 aa17.69■□□□□ 0.42
NPLOC4-213ENST00000573519 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
NPLOC4-213ENST00000573519 POLR3GLQ9BT43 218 aa17.69■□□□□ 0.42
NPLOC4-213ENST00000573519 OVOS2A0A0G2JMS6 1433 aa17.69■□□□□ 0.42
NPLOC4-213ENST00000573519 ERBB3P21860 1342 aa17.69■□□□□ 0.42
NPLOC4-213ENST00000573519 DISP2A7MBM2 1401 aa17.68■□□□□ 0.42
NPLOC4-213ENST00000573519 PSDA5PKW4 1024 aaPredicted RBP17.67■□□□□ 0.42
NPLOC4-213ENST00000573519 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
NPLOC4-213ENST00000573519 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
NPLOC4-213ENST00000573519 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
NPLOC4-213ENST00000573519 EXOC5O00471 708 aa17.66■□□□□ 0.42
NPLOC4-213ENST00000573519 FBLN1P23142 703 aa17.66■□□□□ 0.42
NPLOC4-213ENST00000573519 FYB1O15117 783 aa17.65■□□□□ 0.42
NPLOC4-213ENST00000573519 AMPHP49418 695 aa17.65■□□□□ 0.42
NPLOC4-213ENST00000573519 MARCH10Q8NA82 808 aaPredicted RBP17.65■□□□□ 0.42
NPLOC4-213ENST00000573519 IP6K1Q92551 441 aa17.65■□□□□ 0.42
NPLOC4-213ENST00000573519 CAMKK2Q96RR4 588 aa17.65■□□□□ 0.42
NPLOC4-213ENST00000573519 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.412e-15■■■■□ 23.9
NPLOC4-213ENST00000573519 MAP3K19Q56UN5 1328 aa17.64■□□□□ 0.41
NPLOC4-213ENST00000573519 MYOM1P52179 1685 aa17.64■□□□□ 0.41
NPLOC4-213ENST00000573519 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
NPLOC4-213ENST00000573519 HSPA5P11021 654 aaKnown RBP17.62■□□□□ 0.41
NPLOC4-213ENST00000573519 IL2RBP14784 551 aa17.62■□□□□ 0.41
NPLOC4-213ENST00000573519 HOXC9P31274 260 aa17.62■□□□□ 0.41
NPLOC4-213ENST00000573519 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
NPLOC4-213ENST00000573519 RRS1Q15050 365 aaKnown RBP17.62■□□□□ 0.41
NPLOC4-213ENST00000573519 PARD3Q8TEW0 1356 aa17.62■□□□□ 0.41
NPLOC4-213ENST00000573519 NSD3Q9BZ95 1437 aa17.62■□□□□ 0.41
NPLOC4-213ENST00000573519 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
NPLOC4-213ENST00000573519 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
NPLOC4-213ENST00000573519 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
NPLOC4-213ENST00000573519 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
NPLOC4-213ENST00000573519 PTF1AQ7RTS3 328 aa17.58■□□□□ 0.4
NPLOC4-213ENST00000573519 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.4
NPLOC4-213ENST00000573519 RTL1A6NKG5 1358 aa17.57■□□□□ 0.4
NPLOC4-213ENST00000573519 RREB1Q92766 1687 aa17.57■□□□□ 0.4
NPLOC4-213ENST00000573519 SBF2Q86WG5 1849 aa17.56■□□□□ 0.4
NPLOC4-213ENST00000573519 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
NPLOC4-213ENST00000573519 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
NPLOC4-213ENST00000573519 BCL9O00512 1426 aa17.55■□□□□ 0.4
NPLOC4-213ENST00000573519 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
NPLOC4-213ENST00000573519 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
NPLOC4-213ENST00000573519 CGNL1Q0VF96 1302 aa17.54■□□□□ 0.4
NPLOC4-213ENST00000573519 PLSCR1O15162 318 aa17.54■□□□□ 0.4
NPLOC4-213ENST00000573519 DDX54Q8TDD1 881 aaKnown RBP17.54■□□□□ 0.4
NPLOC4-213ENST00000573519 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
NPLOC4-213ENST00000573519 KCNQ2O43526 872 aa17.53■□□□□ 0.4
NPLOC4-213ENST00000573519 USHBP1Q8N6Y0 703 aa17.53■□□□□ 0.4
NPLOC4-213ENST00000573519 FLT4P35916 1363 aa17.53■□□□□ 0.4
NPLOC4-213ENST00000573519 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
NPLOC4-213ENST00000573519 RGPD2P0DJD1 1756 aa17.51■□□□□ 0.39
NPLOC4-213ENST00000573519 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
NPLOC4-213ENST00000573519 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
NPLOC4-213ENST00000573519 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
NPLOC4-213ENST00000573519 INSRP06213 1382 aa17.51■□□□□ 0.39
NPLOC4-213ENST00000573519 RGPD3A6NKT7 1758 aaPredicted RBP17.51■□□□□ 0.39
NPLOC4-213ENST00000573519 RGPD4Q7Z3J3 1758 aa17.51■□□□□ 0.39
NPLOC4-213ENST00000573519 LRP5O75197 1615 aa17.5■□□□□ 0.39
NPLOC4-213ENST00000573519 SRCAPQ6ZRS2 3230 aa17.5■□□□□ 0.39
NPLOC4-213ENST00000573519 NHSQ6T4R5 1651 aa17.5■□□□□ 0.39
NPLOC4-213ENST00000573519 MEGF6O75095 1541 aa17.49■□□□□ 0.39
NPLOC4-213ENST00000573519 TNNT2P45379 298 aaPredicted RBP17.49■□□□□ 0.39
NPLOC4-213ENST00000573519 PANK3Q9H999 370 aa17.49■□□□□ 0.39
NPLOC4-213ENST00000573519 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
NPLOC4-213ENST00000573519 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
NPLOC4-213ENST00000573519 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
NPLOC4-213ENST00000573519 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms